RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 SASH1O94885 1247 aa13.75□□□□□ -0.21
SNX21-211ENST00000486336 IFIT1P09914 478 aaKnown RBP13.75□□□□□ -0.21
SNX21-211ENST00000486336 RBM5P52756 815 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNX21-211ENST00000486336 CHAF1AQ13111 956 aaPredicted RBP13.75□□□□□ -0.21
SNX21-211ENST00000486336 CYP4F22Q6NT55 531 aa13.75□□□□□ -0.21
SNX21-211ENST00000486336 FTSJ3Q8IY81 847 aaKnown RBP13.75□□□□□ -0.21
SNX21-211ENST00000486336 CERS5Q8N5B7 392 aa13.75□□□□□ -0.21
SNX21-211ENST00000486336 TMEM57Q8N5G2 664 aa13.75□□□□□ -0.21
SNX21-211ENST00000486336 C2orf69Q8N8R5 385 aa13.75□□□□□ -0.21
SNX21-211ENST00000486336 TDRD7Q8NHU6 1098 aaKnown RBP13.75□□□□□ -0.21
SNX21-211ENST00000486336 CEP126Q9P2H0 1117 aa13.75□□□□□ -0.21
SNX21-211ENST00000486336 A0A1B0GUL6 1792 aa13.75□□□□□ -0.21
SNX21-211ENST00000486336 WNT10BO00744 389 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 GNAI2P04899 355 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 SLC5A1P13866 664 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 ECE1P42892 770 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 MMP14P50281 582 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 BCAMP50895 628 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 PUM3Q15397 648 aaKnown RBP13.74□□□□□ -0.21
SNX21-211ENST00000486336 DLGAP5Q15398 846 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 FBXO33Q7Z6M2 555 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 SAPCD2Q86UD0 394 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 CDCA5Q96FF9 252 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 CAPNS2Q96L46 248 aa13.74□□□□□ -0.21
SNX21-211ENST00000486336 GBA2Q9HCG7 927 aaPredicted RBP13.74□□□□□ -0.21
SNX21-211ENST00000486336 SRGAP3O43295 1099 aa13.73□□□□□ -0.21
SNX21-211ENST00000486336 HUNKP57058 714 aa13.73□□□□□ -0.21
SNX21-211ENST00000486336 MFSD14BQ5SR56 506 aa13.73□□□□□ -0.21
SNX21-211ENST00000486336 PRAMEF18Q5VWM3 479 aa13.73□□□□□ -0.21
SNX21-211ENST00000486336 ATG9AQ7Z3C6 839 aa13.73□□□□□ -0.21
SNX21-211ENST00000486336 DZIP1LQ8IYY4 767 aaKnown RBP13.73□□□□□ -0.21
SNX21-211ENST00000486336 AIDAQ96BJ3 306 aa13.73□□□□□ -0.21
SNX21-211ENST00000486336 FAM205AQ6ZU69 1335 aa13.72□□□□□ -0.21
SNX21-211ENST00000486336 CIAO1O76071 339 aa13.72□□□□□ -0.21
SNX21-211ENST00000486336 FKBP1AP62942 108 aaKnown RBP13.72□□□□□ -0.21
SNX21-211ENST00000486336 CFAP100Q494V2 611 aa13.72□□□□□ -0.21
SNX21-211ENST00000486336 ITPRIPQ8IWB1 547 aa13.72□□□□□ -0.21
SNX21-211ENST00000486336 LPIN2Q92539 896 aa13.72□□□□□ -0.21
SNX21-211ENST00000486336 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
SNX21-211ENST00000486336 TTF2Q9UNY4 1162 aaKnown RBP13.72□□□□□ -0.21
SNX21-211ENST00000486336 PCDHAC2Q9Y5I4 1007 aa13.72□□□□□ -0.21
SNX21-211ENST00000486336 PITPNM2Q9BZ72 1349 aa13.71□□□□□ -0.21
SNX21-211ENST00000486336 AOC2O75106 756 aa13.71□□□□□ -0.21
SNX21-211ENST00000486336 FGFR2P21802 821 aa13.71□□□□□ -0.21
SNX21-211ENST00000486336 IL15P40933 162 aaPredicted RBP13.71□□□□□ -0.21
SNX21-211ENST00000486336 TTLL12Q14166 644 aaPredicted RBP13.71□□□□□ -0.21
SNX21-211ENST00000486336 ATP2B3Q16720 1220 aa13.71□□□□□ -0.21
SNX21-211ENST00000486336 COPRSQ9NQ92 184 aa13.71□□□□□ -0.21
SNX21-211ENST00000486336 CLRN2A0PK11 232 aa13.7□□□□□ -0.22
SNX21-211ENST00000486336 MYO1BO43795 1136 aa13.7□□□□□ -0.22
SNX21-211ENST00000486336 APOBEC3FQ8IUX4 373 aaKnown RBP13.7□□□□□ -0.22
SNX21-211ENST00000486336 VEZTQ9HBM0 779 aa13.7□□□□□ -0.22
SNX21-211ENST00000486336 ZNF646O15015 1829 aaPredicted RBP13.69□□□□□ -0.22
SNX21-211ENST00000486336 RLBP1P12271 317 aa13.69□□□□□ -0.22
SNX21-211ENST00000486336 NF2P35240 595 aa13.69□□□□□ -0.22
SNX21-211ENST00000486336 ZNF157P51786 506 aaPredicted RBP13.69□□□□□ -0.22
SNX21-211ENST00000486336 MAP2K1Q02750 393 aaPredicted RBP13.69□□□□□ -0.22
SNX21-211ENST00000486336 G3BP1Q13283 466 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNX21-211ENST00000486336 TBC1D22AQ8WUA7 517 aa13.69□□□□□ -0.22
SNX21-211ENST00000486336 ZBED3Q96IU2 234 aaPredicted RBP13.69□□□□□ -0.22
SNX21-211ENST00000486336 PRMT6Q96LA8 375 aaPredicted RBP13.69□□□□□ -0.22
SNX21-211ENST00000486336 BEGAINQ9BUH8 593 aa13.69□□□□□ -0.22
SNX21-211ENST00000486336 C1orf115Q9H7X2 142 aa13.69□□□□□ -0.22
SNX21-211ENST00000486336 GNL3LQ9NVN8 582 aaKnown RBP13.69□□□□□ -0.22
SNX21-211ENST00000486336 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 FOXN1O15353 648 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 TFCP2Q12800 502 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 PRKG1Q13976 671 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 GRIK5Q16478 980 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 RGMBQ6NW40 437 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 MOB2Q70IA6 237 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 MTMR14Q8NCE2 650 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 PANK1Q8TE04 598 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 HHIPL1Q96JK4 782 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 WBP1LQ9NX94 342 aa13.68□□□□□ -0.22
SNX21-211ENST00000486336 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
SNX21-211ENST00000486336 UBE2Q2LH0YL09 131 aa13.67□□□□□ -0.22
SNX21-211ENST00000486336 ADORA1P30542 326 aa13.67□□□□□ -0.22
SNX21-211ENST00000486336 CRKP46108 304 aa13.67□□□□□ -0.22
SNX21-211ENST00000486336 TIMM10P62072 90 aa13.67□□□□□ -0.22
SNX21-211ENST00000486336 OS9Q13438 667 aaPredicted RBP13.67□□□□□ -0.22
SNX21-211ENST00000486336 MTX1Q13505 466 aa13.67□□□□□ -0.22
SNX21-211ENST00000486336 NEUROD6Q96NK8 337 aa13.67□□□□□ -0.22
SNX21-211ENST00000486336 SERPINA10Q9UK55 444 aa13.67□□□□□ -0.22
SNX21-211ENST00000486336 AKAP2Q9Y2D5 859 aa13.67□□□□□ -0.22
SNX21-211ENST00000486336 ZBTB7BO15156 539 aaPredicted RBP13.66□□□□□ -0.22
SNX21-211ENST00000486336 MS4A1P11836 297 aa13.66□□□□□ -0.22
SNX21-211ENST00000486336 MAP2K2P36507 400 aa13.66□□□□□ -0.22
SNX21-211ENST00000486336 PHKA1P46020 1223 aa13.66□□□□□ -0.22
SNX21-211ENST00000486336 CTCFP49711 727 aaPredicted RBP13.66□□□□□ -0.22
SNX21-211ENST00000486336 ATP8B2P98198 1209 aa13.66□□□□□ -0.22
SNX21-211ENST00000486336 COL13A1Q5TAT6 717 aaPredicted RBP13.66□□□□□ -0.22
SNX21-211ENST00000486336 WDR66Q8TBY9 1149 aa13.66□□□□□ -0.22
SNX21-211ENST00000486336 CCDC102AQ96A19 550 aa13.66□□□□□ -0.22
SNX21-211ENST00000486336 DEFB129Q9H1M3 183 aa13.66□□□□□ -0.22
SNX21-211ENST00000486336 TDRD3Q9H7E2 651 aaKnown RBP13.66□□□□□ -0.22
SNX21-211ENST00000486336 ZNF70Q9UC06 446 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms