RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 FRAT2O75474 233 aaPredicted RBP24.42■■□□□ 1.5
COL6A2-208ENST00000485591 ANKRD45Q5TZF3 282 aa24.42■■□□□ 1.5
COL6A2-208ENST00000485591 FBXW7Q969H0 707 aa24.42■■□□□ 1.5
COL6A2-208ENST00000485591 L3MBTL3Q96JM7 780 aaPredicted RBP24.42■■□□□ 1.5
COL6A2-208ENST00000485591 ZNF512BQ96KM6 892 aaPredicted RBP24.42■■□□□ 1.5
COL6A2-208ENST00000485591 ZBTB47Q9UFB7 747 aaPredicted RBP24.42■■□□□ 1.5
COL6A2-208ENST00000485591 PDS5AQ29RF7 1337 aaKnown RBP24.41■■□□□ 1.5
COL6A2-208ENST00000485591 MYO3BQ8WXR4 1341 aa24.41■■□□□ 1.5
COL6A2-208ENST00000485591 UQCRFS1P1P0C7P4 283 aa24.41■■□□□ 1.5
COL6A2-208ENST00000485591 RASGRF1Q13972 1273 aa24.41■■□□□ 1.5
COL6A2-208ENST00000485591 TTC39AQ5SRH9 613 aa24.41■■□□□ 1.5
COL6A2-208ENST00000485591 RSBN1LQ6PCB5 846 aaPredicted RBP24.41■■□□□ 1.5
COL6A2-208ENST00000485591 BCL11AQ9H165 835 aa24.41■■□□□ 1.5
COL6A2-208ENST00000485591 DENND2AQ9ULE3 1009 aa24.41■■□□□ 1.5
COL6A2-208ENST00000485591 RPS12P25398 132 aaKnown RBP24.4■■□□□ 1.5
COL6A2-208ENST00000485591 FKBP1AP62942 108 aaKnown RBP24.4■■□□□ 1.5
COL6A2-208ENST00000485591 NUCB1Q02818 461 aa24.39■■□□□ 1.49
COL6A2-208ENST00000485591 B4GALNT3Q6L9W6 998 aa24.39■■□□□ 1.49
COL6A2-208ENST00000485591 AGBL3Q8NEM8 1001 aa24.39■■□□□ 1.49
COL6A2-208ENST00000485591 JAG2Q9Y219 1238 aa24.39■■□□□ 1.49
COL6A2-208ENST00000485591 GMPSP49915 693 aaPredicted RBP24.38■■□□□ 1.49
COL6A2-208ENST00000485591 SCNN1DP51172 638 aa24.38■■□□□ 1.49
COL6A2-208ENST00000485591 CHAF1AQ13111 956 aaPredicted RBP24.38■■□□□ 1.49
COL6A2-208ENST00000485591 TBC1D22AQ8WUA7 517 aa24.38■■□□□ 1.49
COL6A2-208ENST00000485591 DPF2Q92785 391 aa24.38■■□□□ 1.49
COL6A2-208ENST00000485591 GMLQ99445 158 aa24.38■■□□□ 1.49
COL6A2-208ENST00000485591 ZBTB12Q9Y330 459 aaPredicted RBP24.38■■□□□ 1.49
COL6A2-208ENST00000485591 MCAMP43121 646 aa24.37■■□□□ 1.49
COL6A2-208ENST00000485591 SCARF1Q14162 830 aa24.37■■□□□ 1.49
COL6A2-208ENST00000485591 MFSD14BQ5SR56 506 aa24.37■■□□□ 1.49
COL6A2-208ENST00000485591 CHD1LQ86WJ1 897 aa24.37■■□□□ 1.49
COL6A2-208ENST00000485591 CERS5Q8N5B7 392 aa24.37■■□□□ 1.49
COL6A2-208ENST00000485591 WDR66Q8TBY9 1149 aa24.37■■□□□ 1.49
COL6A2-208ENST00000485591 CCDC136Q96JN2 1154 aa24.37■■□□□ 1.49
COL6A2-208ENST00000485591 MXD3Q9BW11 206 aa24.37■■□□□ 1.49
COL6A2-208ENST00000485591 HMG20BQ9P0W2 317 aa24.37■■□□□ 1.49
COL6A2-208ENST00000485591 SALL1Q9NSC2 1324 aa24.36■■□□□ 1.49
COL6A2-208ENST00000485591 DOCK2Q92608 1830 aa24.36■■□□□ 1.49
COL6A2-208ENST00000485591 SPATA5Q8NB90 893 aa24.36■■□□□ 1.49
COL6A2-208ENST00000485591 ZNF526Q8TF50 670 aaPredicted RBP24.36■■□□□ 1.49
COL6A2-208ENST00000485591 LNPKQ9C0E8 428 aa24.36■■□□□ 1.49
COL6A2-208ENST00000485591 GPRC5DQ9NZD1 345 aa24.36■■□□□ 1.49
COL6A2-208ENST00000485591 MAST2Q6P0Q8 1798 aa24.35■■□□□ 1.49
COL6A2-208ENST00000485591 CENPQQ7L2Z9 268 aaPredicted RBP24.35■■□□□ 1.49
COL6A2-208ENST00000485591 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.35■■□□□ 1.49
COL6A2-208ENST00000485591 GPATCH3Q96I76 525 aa24.35■■□□□ 1.49
COL6A2-208ENST00000485591 SALL3Q9BXA9 1300 aa24.35■■□□□ 1.49
COL6A2-208ENST00000485591 IQCA1LA6NCM1 817 aa24.34■■□□□ 1.49
COL6A2-208ENST00000485591 LMOD1P29536 600 aaPredicted RBP24.34■■□□□ 1.49
COL6A2-208ENST00000485591 PI16Q6UXB8 463 aa24.34■■□□□ 1.49
COL6A2-208ENST00000485591 C16orf71Q8IYS4 520 aaPredicted RBP24.34■■□□□ 1.49
COL6A2-208ENST00000485591 ECHDC1Q9NTX5 307 aa24.34■■□□□ 1.49
COL6A2-208ENST00000485591 PPP4R2Q9NY27 417 aa24.34■■□□□ 1.49
COL6A2-208ENST00000485591 MYO5AQ9Y4I1 1855 aaKnown RBP24.34■■□□□ 1.49
COL6A2-208ENST00000485591 POTECB2RU33 542 aa24.33■■□□□ 1.49
COL6A2-208ENST00000485591 ATP5JP18859 108 aa24.33■■□□□ 1.49
COL6A2-208ENST00000485591 OTUD7AQ8TE49 926 aaPredicted RBP24.33■■□□□ 1.49
COL6A2-208ENST00000485591 GPBP1L1Q9HC44 474 aaPredicted RBP24.33■■□□□ 1.49
COL6A2-208ENST00000485591 HACL1Q9UJ83 578 aa24.33■■□□□ 1.49
COL6A2-208ENST00000485591 SUGT1Q9Y2Z0 365 aa24.33■■□□□ 1.49
COL6A2-208ENST00000485591 TTC41PQ6P2S7 1318 aa24.33■■□□□ 1.48
COL6A2-208ENST00000485591 ADAMTSL1Q8N6G6 1762 aa24.32■■□□□ 1.48
COL6A2-208ENST00000485591 USP17L8P0C7I0 530 aa24.32■■□□□ 1.48
COL6A2-208ENST00000485591 MX1P20591 662 aa24.32■■□□□ 1.48
COL6A2-208ENST00000485591 KIAA0825Q8IV33 1275 aa24.32■■□□□ 1.48
COL6A2-208ENST00000485591 MICALL2Q8IY33 904 aa24.32■■□□□ 1.48
COL6A2-208ENST00000485591 ZGPATQ8N5A5 531 aaKnown RBP24.32■■□□□ 1.48
COL6A2-208ENST00000485591 NMRK2Q9NPI5 230 aa24.32■■□□□ 1.48
COL6A2-208ENST00000485591 CNOT7Q9UIV1 285 aaKnown RBP24.32■■□□□ 1.48
COL6A2-208ENST00000485591 MMP14P50281 582 aa24.31■■□□□ 1.48
COL6A2-208ENST00000485591 ZNF784Q8NCA9 323 aaPredicted RBP24.31■■□□□ 1.48
COL6A2-208ENST00000485591 RRAGCQ9HB90 399 aa24.31■■□□□ 1.48
COL6A2-208ENST00000485591 SNRKQ9NRH2 765 aa24.31■■□□□ 1.48
COL6A2-208ENST00000485591 VEGFAP15692 232 aaPredicted RBP24.3■■□□□ 1.48
COL6A2-208ENST00000485591 EPS15P42566 896 aa24.3■■□□□ 1.48
COL6A2-208ENST00000485591 ZAP70P43403 619 aa24.3■■□□□ 1.48
COL6A2-208ENST00000485591 ZNF280AP59817 542 aaPredicted RBP24.3■■□□□ 1.48
COL6A2-208ENST00000485591 ECM29Q5VYK3 1845 aa24.3■■□□□ 1.48
COL6A2-208ENST00000485591 SHTN1A0MZ66 631 aa24.29■■□□□ 1.48
COL6A2-208ENST00000485591 H7C1D1 291 aa24.29■■□□□ 1.48
COL6A2-208ENST00000485591 GRIK5Q16478 980 aa24.29■■□□□ 1.48
COL6A2-208ENST00000485591 OGFOD1Q8N543 542 aa24.29■■□□□ 1.48
COL6A2-208ENST00000485591 STAP2Q9UGK3 403 aa24.29■■□□□ 1.48
COL6A2-208ENST00000485591 HDAC9Q9UKV0 1011 aa24.29■■□□□ 1.48
COL6A2-208ENST00000485591 MYH7P12883 1935 aa24.28■■□□□ 1.48
COL6A2-208ENST00000485591 MYH2Q9UKX2 1941 aa24.28■■□□□ 1.48
COL6A2-208ENST00000485591 F8W031 263 aaPredicted RBP24.28■■□□□ 1.48
COL6A2-208ENST00000485591 CYP2E1P05181 493 aaPredicted RBP24.28■■□□□ 1.48
COL6A2-208ENST00000485591 PRDX5P30044 214 aa24.28■■□□□ 1.48
COL6A2-208ENST00000485591 EPHX2P34913 555 aa24.28■■□□□ 1.48
COL6A2-208ENST00000485591 TSHZ3Q63HK5 1081 aa24.28■■□□□ 1.48
COL6A2-208ENST00000485591 HAUS7Q99871 368 aa24.28■■□□□ 1.48
COL6A2-208ENST00000485591 TAF1DQ9H5J8 278 aaPredicted RBP24.28■■□□□ 1.48
COL6A2-208ENST00000485591 ADARB2Q9NS39 739 aaKnown RBP24.28■■□□□ 1.48
COL6A2-208ENST00000485591 TTF2Q9UNY4 1162 aaKnown RBP24.28■■□□□ 1.48
COL6A2-208ENST00000485591 MAST3O60307 1309 aa24.28■■□□□ 1.48
COL6A2-208ENST00000485591 ERC2O15083 957 aa24.27■■□□□ 1.48
COL6A2-208ENST00000485591 LDHBP07195 334 aaKnown RBP24.27■■□□□ 1.48
COL6A2-208ENST00000485591 PDE1AP54750 535 aa24.27■■□□□ 1.48
COL6A2-208ENST00000485591 SPTY2D1Q68D10 685 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms