RNA–Protein interactions for RNA: ENST00000483561.2

DENND4B-209, Transcript of DENN domain containing 4B, human

TSL 4

Gene DENND4B, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4B-209	ENST00000483561	FRAT1	Q92837	279 aa	Predicted RBP	28.88	■■■□□ 2.21
DENND4B-209	ENST00000483561	WBP1L	Q9NX94	342 aa		28.88	■■■□□ 2.21
DENND4B-209	ENST00000483561	HDAC9	Q9UKV0	1011 aa		28.88	■■■□□ 2.21
DENND4B-209	ENST00000483561	PITPNM2	Q9BZ72	1349 aa		28.88	■■■□□ 2.21
DENND4B-209	ENST00000483561	PTPN12	Q05209	780 aa	Known RBP	28.87	■■■□□ 2.21
DENND4B-209	ENST00000483561	INTS3	Q68E01	1043 aa	Known RBP	28.87	■■■□□ 2.21
DENND4B-209	ENST00000483561	PCDHAC2	Q9Y5I4	1007 aa		28.87	■■■□□ 2.21
DENND4B-209	ENST00000483561	ARAP2	Q8WZ64	1704 aa		28.86	■■■□□ 2.21
DENND4B-209	ENST00000483561	EYA2	O00167	538 aa		28.86	■■■□□ 2.21
DENND4B-209	ENST00000483561	PDE8B	O95263	885 aa		28.86	■■■□□ 2.21
DENND4B-209	ENST00000483561	TRIM27	P14373	513 aa		28.86	■■■□□ 2.21
DENND4B-209	ENST00000483561	PRAMEF18	Q5VWM3	479 aa		28.86	■■■□□ 2.21
DENND4B-209	ENST00000483561	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	28.86	■■■□□ 2.21
DENND4B-209	ENST00000483561	C2orf69	Q8N8R5	385 aa		28.85	■■■□□ 2.21
DENND4B-209	ENST00000483561	ZBED3	Q96IU2	234 aa	Predicted RBP	28.85	■■■□□ 2.21
DENND4B-209	ENST00000483561	HHIPL1	Q96JK4	782 aa		28.85	■■■□□ 2.21
DENND4B-209	ENST00000483561	FAM205A	Q6ZU69	1335 aa		28.85	■■■□□ 2.21
DENND4B-209	ENST00000483561	CLUAP1	Q96AJ1	413 aa		28.84	■■■□□ 2.21
DENND4B-209	ENST00000483561	AIDA	Q96BJ3	306 aa		28.84	■■■□□ 2.21
DENND4B-209	ENST00000483561	SIL1	Q9H173	461 aa		28.84	■■■□□ 2.21
DENND4B-209	ENST00000483561	MYH13	Q9UKX3	1938 aa		28.84	■■■□□ 2.21
DENND4B-209	ENST00000483561	IPO8	O15397	1037 aa	Known RBP	28.83	■■■□□ 2.21
DENND4B-209	ENST00000483561	MMP14	P50281	582 aa		28.83	■■■□□ 2.21
DENND4B-209	ENST00000483561	FKBP1A	P62942	108 aa	Known RBP	28.83	■■■□□ 2.21
DENND4B-209	ENST00000483561	ATF7IP	Q6VMQ6	1270 aa		28.83	■■■□□ 2.21
DENND4B-209	ENST00000483561	ATG9A	Q7Z3C6	839 aa		28.83	■■■□□ 2.21
DENND4B-209	ENST00000483561	FBXO33	Q7Z6M2	555 aa		28.83	■■■□□ 2.21
DENND4B-209	ENST00000483561	PA2G4	Q9UQ80	394 aa	Known RBP	28.82	■■■□□ 2.2
DENND4B-209	ENST00000483561	FGFR2	P21802	821 aa		28.81	■■■□□ 2.2
DENND4B-209	ENST00000483561	MAP2K1	Q02750	393 aa	Predicted RBP	28.81	■■■□□ 2.2
DENND4B-209	ENST00000483561	DLGAP5	Q15398	846 aa		28.81	■■■□□ 2.2
DENND4B-209	ENST00000483561	CFAP100	Q494V2	611 aa		28.81	■■■□□ 2.2
DENND4B-209	ENST00000483561	IFFO2	Q5TF58	517 aa		28.81	■■■□□ 2.2
DENND4B-209	ENST00000483561	ZIC5	Q96T25	663 aa		28.81	■■■□□ 2.2
DENND4B-209	ENST00000483561	AOX1	Q06278	1338 aa		28.8	■■■□□ 2.2
DENND4B-209	ENST00000483561	ZBED9	Q6R2W3	1325 aa		28.8	■■■□□ 2.2
DENND4B-209	ENST00000483561	BCAM	P50895	628 aa		28.8	■■■□□ 2.2
DENND4B-209	ENST00000483561	MFSD14B	Q5SR56	506 aa		28.8	■■■□□ 2.2
DENND4B-209	ENST00000483561	VPS37D	Q86XT2	251 aa		28.8	■■■□□ 2.2
DENND4B-209	ENST00000483561	PAPPA2	Q9BXP8	1791 aa		28.8	■■■□□ 2.2
DENND4B-209	ENST00000483561	MAP2K2	P36507	400 aa		28.79	■■■□□ 2.2
DENND4B-209	ENST00000483561	CHAF1A	Q13111	956 aa	Predicted RBP	28.79	■■■□□ 2.2
DENND4B-209	ENST00000483561	PUM3	Q15397	648 aa	Known RBP	28.79	■■■□□ 2.2
DENND4B-209	ENST00000483561	RGMB	Q6NW40	437 aa		28.79	■■■□□ 2.2
DENND4B-209	ENST00000483561	MOB2	Q70IA6	237 aa		28.79	■■■□□ 2.2
DENND4B-209	ENST00000483561	CTCF	P49711	727 aa	Predicted RBP	28.78	■■■□□ 2.2
DENND4B-209	ENST00000483561	CAVIN4	Q5BKX8	364 aa		28.78	■■■□□ 2.2
DENND4B-209	ENST00000483561	MTMR14	Q8NCE2	650 aa		28.78	■■■□□ 2.2
DENND4B-209	ENST00000483561	HDAC5	Q9UQL6	1122 aa		28.78	■■■□□ 2.2
DENND4B-209	ENST00000483561	GNAI3	P08754	354 aa		28.77	■■■□□ 2.2
DENND4B-209	ENST00000483561	IFIT1	P09914	478 aa	Known RBP	28.77	■■■□□ 2.2
DENND4B-209	ENST00000483561	GRIK5	Q16478	980 aa		28.77	■■■□□ 2.2
DENND4B-209	ENST00000483561	PRMT6	Q96LA8	375 aa	Predicted RBP	28.77	■■■□□ 2.2
DENND4B-209	ENST00000483561	CLRN2	A0PK11	232 aa		28.76	■■■□□ 2.19
DENND4B-209	ENST00000483561	FAM155A	B1AL88	458 aa	Predicted RBP	28.76	■■■□□ 2.19
DENND4B-209	ENST00000483561	HSPA8	P11142	646 aa	Known RBP	28.76	■■■□□ 2.19
DENND4B-209	ENST00000483561	LBX1	P52954	281 aa		28.76	■■■□□ 2.19
DENND4B-209	ENST00000483561	ZKSCAN2	Q63HK3	967 aa		28.76	■■■□□ 2.19
DENND4B-209	ENST00000483561	APOBEC3F	Q8IUX4	373 aa	Known RBP	28.76	■■■□□ 2.19
DENND4B-209	ENST00000483561	TTF2	Q9UNY4	1162 aa	Known RBP	28.76	■■■□□ 2.19
DENND4B-209	ENST00000483561	SPDYE2B	A6NHP3	402 aa		28.75	■■■□□ 2.19
DENND4B-209	ENST00000483561	FRAT2	O75474	233 aa	Predicted RBP	28.75	■■■□□ 2.19
DENND4B-209	ENST00000483561	CIAO1	O76071	339 aa		28.75	■■■□□ 2.19
DENND4B-209	ENST00000483561	SPDYE6	P0CI01	402 aa		28.75	■■■□□ 2.19
DENND4B-209	ENST00000483561	ZNF157	P51786	506 aa	Predicted RBP	28.75	■■■□□ 2.19
DENND4B-209	ENST00000483561	RBM5	P52756	815 aa	Known RBP eCLIP	28.75	■■■□□ 2.19
DENND4B-209	ENST00000483561	TMEM57	Q8N5G2	664 aa		28.75	■■■□□ 2.19
DENND4B-209	ENST00000483561	SLC5A1	P13866	664 aa		28.74	■■■□□ 2.19
DENND4B-209	ENST00000483561	COPRS	Q9NQ92	184 aa		28.74	■■■□□ 2.19
DENND4B-209	ENST00000483561	UBE2Q2L	H0YL09	131 aa		28.73	■■■□□ 2.19
DENND4B-209	ENST00000483561	NOG	Q13253	232 aa		28.73	■■■□□ 2.19
DENND4B-209	ENST00000483561	TNS4	Q8IZW8	715 aa		28.73	■■■□□ 2.19
DENND4B-209	ENST00000483561	LPIN2	Q92539	896 aa		28.73	■■■□□ 2.19
DENND4B-209	ENST00000483561	CEP126	Q9P2H0	1117 aa		28.73	■■■□□ 2.19
DENND4B-209	ENST00000483561	TSKS	Q9UJT2	592 aa		28.73	■■■□□ 2.19
DENND4B-209	ENST00000483561	FBXO3	Q9UK99	471 aa		28.73	■■■□□ 2.19
DENND4B-209	ENST00000483561	SRGAP3	O43295	1099 aa		28.72	■■■□□ 2.19
DENND4B-209	ENST00000483561	ATP2B3	Q16720	1220 aa		28.72	■■■□□ 2.19
DENND4B-209	ENST00000483561	BEGAIN	Q9BUH8	593 aa		28.72	■■■□□ 2.19
DENND4B-209	ENST00000483561	IL15	P40933	162 aa	Predicted RBP	28.71	■■■□□ 2.19
DENND4B-209	ENST00000483561	FKBP1B	P68106	108 aa		28.71	■■■□□ 2.19
DENND4B-209	ENST00000483561	PRKG1	Q13976	671 aa		28.71	■■■□□ 2.19
DENND4B-209	ENST00000483561	TTLL12	Q14166	644 aa	Predicted RBP	28.71	■■■□□ 2.19
DENND4B-209	ENST00000483561	VEZT	Q9HBM0	779 aa		28.71	■■■□□ 2.19
DENND4B-209	ENST00000483561	PRDM10	Q9NQV6	1147 aa		28.71	■■■□□ 2.19
DENND4B-209	ENST00000483561	SLC10A3	P09131	477 aa		28.7	■■■□□ 2.18
DENND4B-209	ENST00000483561	CCDC102A	Q96A19	550 aa		28.7	■■■□□ 2.18
DENND4B-209	ENST00000483561	DEFB129	Q9H1M3	183 aa		28.7	■■■□□ 2.18
DENND4B-209	ENST00000483561	AKAP11	Q9UKA4	1901 aa		28.7	■■■□□ 2.18
DENND4B-209	ENST00000483561	MYO1B	O43795	1136 aa		28.69	■■■□□ 2.18
DENND4B-209	ENST00000483561	GNAI2	P04899	355 aa		28.69	■■■□□ 2.18
DENND4B-209	ENST00000483561	NF2	P35240	595 aa		28.69	■■■□□ 2.18
DENND4B-209	ENST00000483561	CRK	P46108	304 aa		28.69	■■■□□ 2.18
DENND4B-209	ENST00000483561	KIF23	Q02241	960 aa	Predicted RBP	28.69	■■■□□ 2.18
DENND4B-209	ENST00000483561	MTX1	Q13505	466 aa		28.69	■■■□□ 2.18
DENND4B-209	ENST00000483561	RASAL3	Q86YV0	1011 aa		28.69	■■■□□ 2.18
DENND4B-209	ENST00000483561	FZD1	Q9UP38	647 aa		28.69	■■■□□ 2.18
DENND4B-209	ENST00000483561	COL1A1	P02452	1464 aa	Predicted RBP	28.69	■■■□□ 2.18
DENND4B-209	ENST00000483561	TBC1D22A	Q8WUA7	517 aa		28.68	■■■□□ 2.18
DENND4B-209	ENST00000483561	TDRD3	Q9H7E2	651 aa	Known RBP	28.68	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms