RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 MROH5Q6ZUA9 1318 aa12.24□□□□□ -0.45
TMEM39A-207ENST00000482162 PAXIP1Q6ZW49 1069 aaPredicted RBP12.24□□□□□ -0.45
TMEM39A-207ENST00000482162 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
TMEM39A-207ENST00000482162 ARHGAP45Q92619 1136 aa12.24□□□□□ -0.45
TMEM39A-207ENST00000482162 HDAC9Q9UKV0 1011 aa12.24□□□□□ -0.45
TMEM39A-207ENST00000482162 SLC10A3P09131 477 aa12.23□□□□□ -0.45
TMEM39A-207ENST00000482162 RARSP54136 660 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-207ENST00000482162 LRRC24Q50LG9 513 aa12.23□□□□□ -0.45
TMEM39A-207ENST00000482162 SMC4Q9NTJ3 1288 aa12.23□□□□□ -0.45
TMEM39A-207ENST00000482162 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-207ENST00000482162 KIF16BQ96L93 1317 aa12.22□□□□□ -0.45
TMEM39A-207ENST00000482162 PLIN1O60240 522 aa12.22□□□□□ -0.45
TMEM39A-207ENST00000482162 PDE8BO95263 885 aa12.22□□□□□ -0.45
TMEM39A-207ENST00000482162 FGFR2P21802 821 aa12.22□□□□□ -0.45
TMEM39A-207ENST00000482162 HIBADHP31937 336 aaKnown RBP12.22□□□□□ -0.45
TMEM39A-207ENST00000482162 GRM1Q13255 1194 aa12.22□□□□□ -0.45
TMEM39A-207ENST00000482162 PRMT6Q96LA8 375 aaPredicted RBP12.22□□□□□ -0.45
TMEM39A-207ENST00000482162 BEGAINQ9BUH8 593 aa12.22□□□□□ -0.45
TMEM39A-207ENST00000482162 SPDYE2BA6NHP3 402 aa12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 ZBTB22O15209 634 aa12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 SPDYE6P0CI01 402 aa12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 GYG1P46976 350 aa12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 ZNF157P51786 506 aaPredicted RBP12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 KIF23Q02241 960 aaPredicted RBP12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 PTPN12Q05209 780 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 LDLRAD1Q5T700 205 aa12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 PRAMEF18Q5VWM3 479 aa12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 INTS3Q68E01 1043 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 APOBEC3FQ8IUX4 373 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 FBXW7Q969H0 707 aa12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 CSRNP1Q96S65 589 aa12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 FBXO3Q9UK99 471 aa12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 SCAF8Q9UPN6 1271 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-207ENST00000482162 PAPPA2Q9BXP8 1791 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 EYA2O00167 538 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 DLGAP5Q15398 846 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 MOB2Q70IA6 237 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 ATG9AQ7Z3C6 839 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 RASAL3Q86YV0 1011 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 KLHDC4Q8TBB5 520 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 MRIQ9BWK5 157 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 PCDHAC2Q9Y5I4 1007 aa12.2□□□□□ -0.46
TMEM39A-207ENST00000482162 AOX1Q06278 1338 aa12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 UBE2Q2LH0YL09 131 aa12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 CIAO1O76071 339 aa12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 HDLBPQ00341 1268 aaKnown RBP12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 MAP3K11Q16584 847 aa12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 CFAP100Q494V2 611 aa12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 MFSD14BQ5SR56 506 aa12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 SERPINA10Q9UK55 444 aa12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 PPP2R3BQ9Y5P8 575 aa12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 COL1A1P02452 1464 aaPredicted RBP12.19□□□□□ -0.46
TMEM39A-207ENST00000482162 UNCXA6NJT0 531 aa12.18□□□□□ -0.46
TMEM39A-207ENST00000482162 UBTFL1P0CB47 393 aaPredicted RBP12.18□□□□□ -0.46
TMEM39A-207ENST00000482162 PUM3Q15397 648 aaKnown RBP12.18□□□□□ -0.46
TMEM39A-207ENST00000482162 GRIK5Q16478 980 aa12.18□□□□□ -0.46
TMEM39A-207ENST00000482162 MIER1Q8N108 512 aa12.18□□□□□ -0.46
TMEM39A-207ENST00000482162 RNF186Q9NXI6 227 aa12.18□□□□□ -0.46
TMEM39A-207ENST00000482162 HDAC5Q9UQL6 1122 aa12.18□□□□□ -0.46
TMEM39A-207ENST00000482162 TM4SF4P48230 202 aa12.17□□□□□ -0.46
TMEM39A-207ENST00000482162 BCAMP50895 628 aa12.17□□□□□ -0.46
TMEM39A-207ENST00000482162 MTX1Q13505 466 aa12.17□□□□□ -0.46
TMEM39A-207ENST00000482162 TBC1D22AQ8WUA7 517 aa12.17□□□□□ -0.46
TMEM39A-207ENST00000482162 COPRSQ9NQ92 184 aa12.17□□□□□ -0.46
TMEM39A-207ENST00000482162 TSKSQ9UJT2 592 aa12.17□□□□□ -0.46
TMEM39A-207ENST00000482162 JAG2Q9Y219 1238 aa12.17□□□□□ -0.46
TMEM39A-207ENST00000482162 SUGT1Q9Y2Z0 365 aa12.17□□□□□ -0.46
TMEM39A-207ENST00000482162 F8W031 263 aaPredicted RBP12.16□□□□□ -0.46
TMEM39A-207ENST00000482162 IFIT1P09914 478 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-207ENST00000482162 NF2P35240 595 aa12.16□□□□□ -0.46
TMEM39A-207ENST00000482162 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
TMEM39A-207ENST00000482162 CAVIN4Q5BKX8 364 aa12.16□□□□□ -0.46
TMEM39A-207ENST00000482162 DZIP1LQ8IYY4 767 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-207ENST00000482162 LPIN2Q92539 896 aa12.16□□□□□ -0.46
TMEM39A-207ENST00000482162 MEIS3Q99687 375 aa12.16□□□□□ -0.46
TMEM39A-207ENST00000482162 TTF2Q9UNY4 1162 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-207ENST00000482162 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
TMEM39A-207ENST00000482162 MYO1BO43795 1136 aa12.15□□□□□ -0.46
TMEM39A-207ENST00000482162 TRIM27P14373 513 aa12.15□□□□□ -0.46
TMEM39A-207ENST00000482162 RASA3Q14644 834 aa12.15□□□□□ -0.46
TMEM39A-207ENST00000482162 SUPT20HL1Q3ZLR7 823 aa12.15□□□□□ -0.46
TMEM39A-207ENST00000482162 ARMC9Q7Z3E5 817 aa12.15□□□□□ -0.46
TMEM39A-207ENST00000482162 ABHD8Q96I13 439 aa12.15□□□□□ -0.46
TMEM39A-207ENST00000482162 TEPSINQ96N21 525 aa12.15□□□□□ -0.46
TMEM39A-207ENST00000482162 ZNF70Q9UC06 446 aaPredicted RBP12.15□□□□□ -0.46
TMEM39A-207ENST00000482162 LRRFIP2Q9Y608 721 aaKnown RBP12.15□□□□□ -0.46
TMEM39A-207ENST00000482162 SSC5DA1L4H1 1573 aa12.14□□□□□ -0.47
TMEM39A-207ENST00000482162 CLRN2A0PK11 232 aa12.14□□□□□ -0.47
TMEM39A-207ENST00000482162 IL15P40933 162 aaPredicted RBP12.14□□□□□ -0.47
TMEM39A-207ENST00000482162 CRKP46108 304 aa12.14□□□□□ -0.47
TMEM39A-207ENST00000482162 NOM1Q5C9Z4 860 aaKnown RBP12.14□□□□□ -0.47
TMEM39A-207ENST00000482162 NBPF12Q5TAG4 269 aaPredicted RBP12.14□□□□□ -0.47
TMEM39A-207ENST00000482162 ATF7IPQ6VMQ6 1270 aa12.14□□□□□ -0.47
TMEM39A-207ENST00000482162 VPS37DQ86XT2 251 aa12.14□□□□□ -0.47
TMEM39A-207ENST00000482162 ZDHHC15Q96MV8 337 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms