RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 IL1R1P14778 569 aa14.67□□□□□ -0.06
GARNL3-217ENST00000481875 NF2P35240 595 aa14.67□□□□□ -0.06
GARNL3-217ENST00000481875 LDLRAD1Q5T700 205 aa14.67□□□□□ -0.06
GARNL3-217ENST00000481875 APOBEC3FQ8IUX4 373 aaKnown RBP14.67□□□□□ -0.06
GARNL3-217ENST00000481875 MXD3Q9BW11 206 aa14.67□□□□□ -0.06
GARNL3-217ENST00000481875 HDAC9Q9UKV0 1011 aa14.67□□□□□ -0.06
GARNL3-217ENST00000481875 KLRK1P26718 216 aa14.66□□□□□ -0.06
GARNL3-217ENST00000481875 EXOSC9Q06265 439 aaKnown RBP14.66□□□□□ -0.06
GARNL3-217ENST00000481875 IFIT5Q13325 482 aaKnown RBP14.66□□□□□ -0.06
GARNL3-217ENST00000481875 PKN2Q16513 984 aaKnown RBP14.66□□□□□ -0.06
GARNL3-217ENST00000481875 MAP3K11Q16584 847 aa14.66□□□□□ -0.06
GARNL3-217ENST00000481875 YTHDC1Q96MU7 727 aaKnown RBP14.66□□□□□ -0.06
GARNL3-217ENST00000481875 UBE2Q2LH0YL09 131 aa14.65□□□□□ -0.06
GARNL3-217ENST00000481875 GTF2IP78347 998 aa14.65□□□□□ -0.06
GARNL3-217ENST00000481875 CTU1Q7Z7A3 348 aaKnown RBP14.65□□□□□ -0.06
GARNL3-217ENST00000481875 PPP2R3BQ9Y5P8 575 aa14.65□□□□□ -0.06
GARNL3-217ENST00000481875 GRM8O00222 908 aa14.64□□□□□ -0.07
GARNL3-217ENST00000481875 ABCB7O75027 752 aa14.64□□□□□ -0.07
GARNL3-217ENST00000481875 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
GARNL3-217ENST00000481875 MOB2Q70IA6 237 aa14.64□□□□□ -0.07
GARNL3-217ENST00000481875 ARMC9Q7Z3E5 817 aa14.64□□□□□ -0.07
GARNL3-217ENST00000481875 KIAA0825Q8IV33 1275 aa14.64□□□□□ -0.07
GARNL3-217ENST00000481875 CERS5Q8N5B7 392 aa14.64□□□□□ -0.07
GARNL3-217ENST00000481875 SASH1O94885 1247 aa14.63□□□□□ -0.07
GARNL3-217ENST00000481875 KCNJ4P48050 445 aa14.63□□□□□ -0.07
GARNL3-217ENST00000481875 INHBEP58166 350 aa14.63□□□□□ -0.07
GARNL3-217ENST00000481875 PRAMEF18Q5VWM3 479 aa14.63□□□□□ -0.07
GARNL3-217ENST00000481875 ZNF804AQ7Z570 1209 aa14.63□□□□□ -0.07
GARNL3-217ENST00000481875 F6X3S4 739 aa14.62□□□□□ -0.07
GARNL3-217ENST00000481875 PTPN12Q05209 780 aaKnown RBP14.62□□□□□ -0.07
GARNL3-217ENST00000481875 SREBF2Q12772 1141 aa14.62□□□□□ -0.07
GARNL3-217ENST00000481875 DLGAP5Q15398 846 aa14.62□□□□□ -0.07
GARNL3-217ENST00000481875 CCDC57Q2TAC2 916 aa14.62□□□□□ -0.07
GARNL3-217ENST00000481875 LMBR1LQ6UX01 489 aa14.62□□□□□ -0.07
GARNL3-217ENST00000481875 DEFB129Q9H1M3 183 aa14.62□□□□□ -0.07
GARNL3-217ENST00000481875 SCAF8Q9UPN6 1271 aaKnown RBP14.62□□□□□ -0.07
GARNL3-217ENST00000481875 HTTP42858 3142 aa14.62□□□□□ -0.07
GARNL3-217ENST00000481875 UTYO14607 1347 aa14.62□□□□□ -0.07
GARNL3-217ENST00000481875 FAM205AQ6ZU69 1335 aa14.62□□□□□ -0.07
GARNL3-217ENST00000481875 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
GARNL3-217ENST00000481875 TAF5LO75529 589 aa14.61□□□□□ -0.07
GARNL3-217ENST00000481875 ALDH1A1P00352 501 aa14.61□□□□□ -0.07
GARNL3-217ENST00000481875 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
GARNL3-217ENST00000481875 UBE4AQ14139 1066 aa14.61□□□□□ -0.07
GARNL3-217ENST00000481875 EPHA10Q5JZY3 1008 aa14.61□□□□□ -0.07
GARNL3-217ENST00000481875 SPRYD7Q5W111 196 aa14.61□□□□□ -0.07
GARNL3-217ENST00000481875 LDHAL6AQ6ZMR3 332 aa14.61□□□□□ -0.07
GARNL3-217ENST00000481875 FBXW7Q969H0 707 aa14.61□□□□□ -0.07
GARNL3-217ENST00000481875 CENPFP49454 3210 aa14.6□□□□□ -0.07
GARNL3-217ENST00000481875 SNAP23O00161 211 aa14.6□□□□□ -0.07
GARNL3-217ENST00000481875 SLC34A2O95436 690 aa14.6□□□□□ -0.07
GARNL3-217ENST00000481875 ZBTB48P10074 688 aaPredicted RBP14.6□□□□□ -0.07
GARNL3-217ENST00000481875 TTLL12Q14166 644 aaPredicted RBP14.6□□□□□ -0.07
GARNL3-217ENST00000481875 TDRD7Q8NHU6 1098 aaKnown RBP14.6□□□□□ -0.07
GARNL3-217ENST00000481875 ZNF296Q8WUU4 475 aaPredicted RBP14.6□□□□□ -0.07
GARNL3-217ENST00000481875 ZNF521Q96K83 1311 aa14.6□□□□□ -0.07
GARNL3-217ENST00000481875 GPR25O00155 361 aa14.59□□□□□ -0.07
GARNL3-217ENST00000481875 MYO1BO43795 1136 aa14.59□□□□□ -0.07
GARNL3-217ENST00000481875 PPP1R12BO60237 982 aaPredicted RBP14.59□□□□□ -0.07
GARNL3-217ENST00000481875 SUPT20HL1Q3ZLR7 823 aa14.59□□□□□ -0.07
GARNL3-217ENST00000481875 HELBQ8NG08 1087 aaPredicted RBP14.59□□□□□ -0.07
GARNL3-217ENST00000481875 KAZALD1Q96I82 304 aa14.59□□□□□ -0.07
GARNL3-217ENST00000481875 PRMT6Q96LA8 375 aaPredicted RBP14.59□□□□□ -0.07
GARNL3-217ENST00000481875 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
GARNL3-217ENST00000481875 ARAP2Q8WZ64 1704 aa14.58□□□□□ -0.07
GARNL3-217ENST00000481875 MANSC4A6NHS7 340 aaPredicted RBP14.58□□□□□ -0.08
GARNL3-217ENST00000481875 TBC1D8O95759 1140 aa14.58□□□□□ -0.08
GARNL3-217ENST00000481875 RABL6Q3YEC7 729 aaPredicted RBP14.58□□□□□ -0.08
GARNL3-217ENST00000481875 CFAP100Q494V2 611 aa14.58□□□□□ -0.08
GARNL3-217ENST00000481875 SRCIN1Q9C0H9 1055 aa14.58□□□□□ -0.08
GARNL3-217ENST00000481875 SERPINA10Q9UK55 444 aa14.58□□□□□ -0.08
GARNL3-217ENST00000481875 RIPOR2Q9Y4F9 1068 aa14.58□□□□□ -0.08
GARNL3-217ENST00000481875 SSC5DA1L4H1 1573 aa14.58□□□□□ -0.08
GARNL3-217ENST00000481875 ZBED9Q6R2W3 1325 aa14.58□□□□□ -0.08
GARNL3-217ENST00000481875 SLC10A4Q96EP9 437 aa14.57□□□□□ -0.08
GARNL3-217ENST00000481875 ZNF594Q96JF6 807 aaPredicted RBP14.57□□□□□ -0.08
GARNL3-217ENST00000481875 FAM84BQ96KN1 310 aaPredicted RBP14.57□□□□□ -0.08
GARNL3-217ENST00000481875 CNNM1Q9NRU3 951 aa14.57□□□□□ -0.08
GARNL3-217ENST00000481875 ANGEL1Q9UNK9 670 aaKnown RBP14.57□□□□□ -0.08
GARNL3-217ENST00000481875 HPS5Q9UPZ3 1129 aa14.57□□□□□ -0.08
GARNL3-217ENST00000481875 MKI67P46013 3256 aaKnown RBP14.56□□□□□ -0.08
GARNL3-217ENST00000481875 HIBADHP31937 336 aaKnown RBP14.56□□□□□ -0.08
GARNL3-217ENST00000481875 HDLBPQ00341 1268 aaKnown RBP14.56□□□□□ -0.08
GARNL3-217ENST00000481875 TNFAIP1Q13829 316 aa14.56□□□□□ -0.08
GARNL3-217ENST00000481875 FBXO46Q6PJ61 603 aaPredicted RBP14.56□□□□□ -0.08
GARNL3-217ENST00000481875 MRIQ9BWK5 157 aa14.56□□□□□ -0.08
GARNL3-217ENST00000481875 CHMP3Q9Y3E7 222 aa14.56□□□□□ -0.08
GARNL3-217ENST00000481875 MROH5Q6ZUA9 1318 aa14.56□□□□□ -0.08
GARNL3-217ENST00000481875 TESPA1A2RU30 521 aaPredicted RBP14.55□□□□□ -0.08
GARNL3-217ENST00000481875 E9PSI1 815 aa14.55□□□□□ -0.08
GARNL3-217ENST00000481875 FKTNO75072 461 aa14.55□□□□□ -0.08
GARNL3-217ENST00000481875 USP2O75604 605 aaPredicted RBP14.55□□□□□ -0.08
GARNL3-217ENST00000481875 NBPF7P0C2Y1 421 aaPredicted RBP14.55□□□□□ -0.08
GARNL3-217ENST00000481875 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
GARNL3-217ENST00000481875 TAF7LQ5H9L4 462 aa14.55□□□□□ -0.08
GARNL3-217ENST00000481875 FBXO33Q7Z6M2 555 aa14.55□□□□□ -0.08
GARNL3-217ENST00000481875 IFNL1Q8IU54 200 aa14.55□□□□□ -0.08
GARNL3-217ENST00000481875 CDCA7LQ96GN5 454 aa14.55□□□□□ -0.08
GARNL3-217ENST00000481875 PCDHAC2Q9Y5I4 1007 aa14.55□□□□□ -0.08
GARNL3-217ENST00000481875 PTPRCP08575 1304 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms