RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 JAG2Q9Y219 1238 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 ADAMTSL1Q8N6G6 1762 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 TRPM7Q96QT4 1865 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 SCN9AQ15858 1988 aa11.36□□□□□ -0.59
CMTM1-208ENST00000479381 MYO3BQ8WXR4 1341 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 WTIPA6NIX2 430 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-208ENST00000479381 F8W031 263 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-208ENST00000479381 SNAP23O00161 211 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
CMTM1-208ENST00000479381 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
CMTM1-208ENST00000479381 KLRK1P26718 216 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 ECE1P42892 770 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 PSEN1P49768 467 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 RBM5P52756 815 aaKnown RBP eCLIP11.35□□□□□ -0.59
CMTM1-208ENST00000479381 FMR1Q06787 632 aaKnown RBP eCLIP11.35□□□□□ -0.59
CMTM1-208ENST00000479381 KIAA0825Q8IV33 1275 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 FTSJ3Q8IY81 847 aaKnown RBP11.35□□□□□ -0.59
CMTM1-208ENST00000479381 DNAJC5GQ8N7S2 189 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 ZC3H15Q8WU90 426 aaKnown RBP11.35□□□□□ -0.59
CMTM1-208ENST00000479381 BEGAINQ9BUH8 593 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 MXD3Q9BW11 206 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 MYOZ2Q9NPC6 264 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
CMTM1-208ENST00000479381 CNTNAP1P78357 1384 aa11.34□□□□□ -0.59
CMTM1-208ENST00000479381 RARSP54136 660 aaKnown RBP11.34□□□□□ -0.59
CMTM1-208ENST00000479381 HIRAP54198 1017 aaPredicted RBP11.34□□□□□ -0.59
CMTM1-208ENST00000479381 TTLL12Q14166 644 aaPredicted RBP11.34□□□□□ -0.59
CMTM1-208ENST00000479381 CAVIN4Q5BKX8 364 aa11.34□□□□□ -0.59
CMTM1-208ENST00000479381 STRIP1Q5VSL9 837 aa11.34□□□□□ -0.59
CMTM1-208ENST00000479381 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
CMTM1-208ENST00000479381 TXNRD3Q86VQ6 643 aa11.34□□□□□ -0.59
CMTM1-208ENST00000479381 CLUAP1Q96AJ1 413 aa11.34□□□□□ -0.59
CMTM1-208ENST00000479381 SIL1Q9H173 461 aa11.34□□□□□ -0.59
CMTM1-208ENST00000479381 CD209Q9NNX6 404 aa11.34□□□□□ -0.59
CMTM1-208ENST00000479381 PSME4Q14997 1843 aa11.33□□□□□ -0.6
CMTM1-208ENST00000479381 ADM5C9JUS6 153 aa11.33□□□□□ -0.6
CMTM1-208ENST00000479381 RIOK3O14730 519 aaKnown RBP11.33□□□□□ -0.6
CMTM1-208ENST00000479381 SEC24BO95487 1268 aa11.33□□□□□ -0.6
CMTM1-208ENST00000479381 CHAF1AQ13111 956 aaPredicted RBP11.33□□□□□ -0.6
CMTM1-208ENST00000479381 SCARF1Q14162 830 aa11.33□□□□□ -0.6
CMTM1-208ENST00000479381 TRMT2AQ8IZ69 625 aaKnown RBP11.33□□□□□ -0.6
CMTM1-208ENST00000479381 KLHDC4Q8TBB5 520 aa11.33□□□□□ -0.6
CMTM1-208ENST00000479381 PUS3Q9BZE2 481 aaKnown RBP11.33□□□□□ -0.6
CMTM1-208ENST00000479381 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
CMTM1-208ENST00000479381 TAOK2Q9UL54 1235 aa11.33□□□□□ -0.6
CMTM1-208ENST00000479381 LRRFIP2Q9Y608 721 aaKnown RBP11.33□□□□□ -0.6
CMTM1-208ENST00000479381 A0A1B0GUL6 1792 aa11.33□□□□□ -0.6
CMTM1-208ENST00000479381 MYO1BO43795 1136 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 SASH1O94885 1247 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 EGFRP00533 1210 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 IFIT1P09914 478 aaKnown RBP11.32□□□□□ -0.6
CMTM1-208ENST00000479381 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
CMTM1-208ENST00000479381 NF2P35240 595 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 GYG1P46976 350 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 VEGFBP49765 207 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 UBE4AQ14139 1066 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 DACT2Q5SW24 774 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 ZKSCAN2Q63HK3 967 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 CYP4F22Q6NT55 531 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 C2orf69Q8N8R5 385 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 USP44Q9H0E7 712 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 UTYO14607 1347 aa11.32□□□□□ -0.6
CMTM1-208ENST00000479381 WDR33Q9C0J8 1336 aaKnown RBP11.32□□□□□ -0.6
CMTM1-208ENST00000479381 BCAR3O75815 825 aa11.31□□□□□ -0.6
CMTM1-208ENST00000479381 GNAI3P08754 354 aa11.31□□□□□ -0.6
CMTM1-208ENST00000479381 SLC5A1P13866 664 aa11.31□□□□□ -0.6
CMTM1-208ENST00000479381 HUNKP57058 714 aa11.31□□□□□ -0.6
CMTM1-208ENST00000479381 DLGAP5Q15398 846 aa11.31□□□□□ -0.6
CMTM1-208ENST00000479381 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
CMTM1-208ENST00000479381 LHX8Q68G74 356 aa11.31□□□□□ -0.6
CMTM1-208ENST00000479381 ANKRD44Q8N8A2 993 aa11.31□□□□□ -0.6
CMTM1-208ENST00000479381 JMYQ8N9B5 988 aa11.31□□□□□ -0.6
CMTM1-208ENST00000479381 CAPNS2Q96L46 248 aa11.31□□□□□ -0.6
CMTM1-208ENST00000479381 GBA2Q9HCG7 927 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-208ENST00000479381 IQSEC3Q9UPP2 1182 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-208ENST00000479381 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
CMTM1-208ENST00000479381 RABL6Q3YEC7 729 aaPredicted RBP11.3□□□□□ -0.6
CMTM1-208ENST00000479381 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
CMTM1-208ENST00000479381 KAZALD1Q96I82 304 aa11.3□□□□□ -0.6
CMTM1-208ENST00000479381 MEIS3Q99687 375 aa11.3□□□□□ -0.6
CMTM1-208ENST00000479381 VEZTQ9HBM0 779 aa11.3□□□□□ -0.6
CMTM1-208ENST00000479381 SCAF8Q9UPN6 1271 aaKnown RBP11.3□□□□□ -0.6
CMTM1-208ENST00000479381 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
CMTM1-208ENST00000479381 ASTN2O75129 1339 aaPredicted RBP11.3□□□□□ -0.6
CMTM1-208ENST00000479381 ZBED9Q6R2W3 1325 aa11.3□□□□□ -0.6
CMTM1-208ENST00000479381 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
CMTM1-208ENST00000479381 EYA2O00167 538 aa11.29□□□□□ -0.6
CMTM1-208ENST00000479381 ZNF280AP59817 542 aaPredicted RBP11.29□□□□□ -0.6
CMTM1-208ENST00000479381 OS9Q13438 667 aaPredicted RBP11.29□□□□□ -0.6
CMTM1-208ENST00000479381 PUM3Q15397 648 aaKnown RBP11.29□□□□□ -0.6
CMTM1-208ENST00000479381 NBPF9Q3BBW0 867 aa11.29□□□□□ -0.6
CMTM1-208ENST00000479381 MFSD14BQ5SR56 506 aa11.29□□□□□ -0.6
CMTM1-208ENST00000479381 IER5LQ5T953 404 aa11.29□□□□□ -0.6
CMTM1-208ENST00000479381 DLK2Q6UY11 383 aa11.29□□□□□ -0.6
CMTM1-208ENST00000479381 ITPRIPQ8IWB1 547 aa11.29□□□□□ -0.6
CMTM1-208ENST00000479381 ARHGAP45Q92619 1136 aa11.29□□□□□ -0.6
CMTM1-208ENST00000479381 CDCA5Q96FF9 252 aa11.29□□□□□ -0.6
CMTM1-208ENST00000479381 CEP126Q9P2H0 1117 aa11.29□□□□□ -0.6
CMTM1-208ENST00000479381 SRGAP3O43295 1099 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms