RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 THSD7BQ9C0I4 1608 aa17.29■□□□□ 0.36
RCC1-211ENST00000478232 KIF23Q02241 960 aaPredicted RBP17.29■□□□□ 0.36
RCC1-211ENST00000478232 APOBEC3FQ8IUX4 373 aaKnown RBP17.29■□□□□ 0.36
RCC1-211ENST00000478232 TDRD7Q8NHU6 1098 aaKnown RBP17.29■□□□□ 0.36
RCC1-211ENST00000478232 FAM84BQ96KN1 310 aaPredicted RBP17.29■□□□□ 0.36
RCC1-211ENST00000478232 ZIC5Q96T25 663 aa17.29■□□□□ 0.36
RCC1-211ENST00000478232 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
RCC1-211ENST00000478232 NF2P35240 595 aa17.28■□□□□ 0.36
RCC1-211ENST00000478232 PRAMEF18Q5VWM3 479 aa17.28■□□□□ 0.36
RCC1-211ENST00000478232 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
RCC1-211ENST00000478232 NOB1Q9ULX3 412 aaKnown RBP17.28■□□□□ 0.36
RCC1-211ENST00000478232 SCAF8Q9UPN6 1271 aaKnown RBP17.28■□□□□ 0.36
RCC1-211ENST00000478232 SLC10A3P09131 477 aa17.27■□□□□ 0.36
RCC1-211ENST00000478232 GYG1P46976 350 aa17.27■□□□□ 0.36
RCC1-211ENST00000478232 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
RCC1-211ENST00000478232 API5Q9BZZ5 524 aaKnown RBP17.27■□□□□ 0.36
RCC1-211ENST00000478232 HDAC5Q9UQL6 1122 aa17.27■□□□□ 0.36
RCC1-211ENST00000478232 F8W031 263 aaPredicted RBP17.26■□□□□ 0.35
RCC1-211ENST00000478232 UBE2Q2LH0YL09 131 aa17.26■□□□□ 0.35
RCC1-211ENST00000478232 MYO1BO43795 1136 aa17.26■□□□□ 0.35
RCC1-211ENST00000478232 PDE8BO95263 885 aa17.26■□□□□ 0.35
RCC1-211ENST00000478232 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
RCC1-211ENST00000478232 FBXO33Q7Z6M2 555 aa17.26■□□□□ 0.35
RCC1-211ENST00000478232 TSKSQ9UJT2 592 aa17.26■□□□□ 0.35
RCC1-211ENST00000478232 TTLL12Q14166 644 aaPredicted RBP17.25■□□□□ 0.35
RCC1-211ENST00000478232 CFAP100Q494V2 611 aa17.25■□□□□ 0.35
RCC1-211ENST00000478232 CAVIN4Q5BKX8 364 aa17.25■□□□□ 0.35
RCC1-211ENST00000478232 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
RCC1-211ENST00000478232 PRMT6Q96LA8 375 aaPredicted RBP17.25■□□□□ 0.35
RCC1-211ENST00000478232 DEFB129Q9H1M3 183 aa17.25■□□□□ 0.35
RCC1-211ENST00000478232 JAG2Q9Y219 1238 aa17.25■□□□□ 0.35
RCC1-211ENST00000478232 UBTFL1P0CB47 393 aaPredicted RBP17.24■□□□□ 0.35
RCC1-211ENST00000478232 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
RCC1-211ENST00000478232 MFSD14BQ5SR56 506 aa17.24■□□□□ 0.35
RCC1-211ENST00000478232 MOB2Q70IA6 237 aa17.24■□□□□ 0.35
RCC1-211ENST00000478232 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
RCC1-211ENST00000478232 VGLL2Q8N8G2 317 aa17.24■□□□□ 0.35
RCC1-211ENST00000478232 ARHGAP45Q92619 1136 aa17.24■□□□□ 0.35
RCC1-211ENST00000478232 CSRNP1Q96S65 589 aa17.24■□□□□ 0.35
RCC1-211ENST00000478232 SAGE1Q9NXZ1 904 aa17.24■□□□□ 0.35
RCC1-211ENST00000478232 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
RCC1-211ENST00000478232 SPDYE2BA6NHP3 402 aa17.23■□□□□ 0.35
RCC1-211ENST00000478232 EYA2O00167 538 aa17.23■□□□□ 0.35
RCC1-211ENST00000478232 SPDYE6P0CI01 402 aa17.23■□□□□ 0.35
RCC1-211ENST00000478232 RBM5P52756 815 aaKnown RBP eCLIP17.23■□□□□ 0.35
RCC1-211ENST00000478232 RASAL3Q86YV0 1011 aa17.23■□□□□ 0.35
RCC1-211ENST00000478232 KLHDC4Q8TBB5 520 aa17.23■□□□□ 0.35
RCC1-211ENST00000478232 PPP2R3BQ9Y5P8 575 aa17.23■□□□□ 0.35
RCC1-211ENST00000478232 RFX5P48382 616 aaPredicted RBP17.22■□□□□ 0.35
RCC1-211ENST00000478232 RNF186Q9NXI6 227 aa17.22■□□□□ 0.35
RCC1-211ENST00000478232 SERPINA10Q9UK55 444 aa17.22■□□□□ 0.35
RCC1-211ENST00000478232 FBXO3Q9UK99 471 aa17.22■□□□□ 0.35
RCC1-211ENST00000478232 TTF2Q9UNY4 1162 aaKnown RBP17.22■□□□□ 0.35
RCC1-211ENST00000478232 PCDHAC2Q9Y5I4 1007 aa17.22■□□□□ 0.35
RCC1-211ENST00000478232 FRAT2O75474 233 aaPredicted RBP17.21■□□□□ 0.35
RCC1-211ENST00000478232 TRPA1O75762 1119 aa17.21■□□□□ 0.35
RCC1-211ENST00000478232 IFIT1P09914 478 aaKnown RBP17.21■□□□□ 0.35
RCC1-211ENST00000478232 PTPN12Q05209 780 aaKnown RBP17.21■□□□□ 0.35
RCC1-211ENST00000478232 PUM3Q15397 648 aaKnown RBP17.21■□□□□ 0.35
RCC1-211ENST00000478232 SUPT20HL1Q3ZLR7 823 aa17.21■□□□□ 0.35
RCC1-211ENST00000478232 LDLRAD1Q5T700 205 aa17.21■□□□□ 0.35
RCC1-211ENST00000478232 TBC1D22AQ8WUA7 517 aa17.21■□□□□ 0.35
RCC1-211ENST00000478232 PAPPA2Q9BXP8 1791 aa17.2■□□□□ 0.34
RCC1-211ENST00000478232 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
RCC1-211ENST00000478232 FGFR2P21802 821 aa17.2■□□□□ 0.34
RCC1-211ENST00000478232 ABHD8Q96I13 439 aa17.2■□□□□ 0.34
RCC1-211ENST00000478232 A0A1B0GUL6 1792 aa17.2■□□□□ 0.34
RCC1-211ENST00000478232 KIF16BQ96L93 1317 aa17.2■□□□□ 0.34
RCC1-211ENST00000478232 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
RCC1-211ENST00000478232 CLRN2A0PK11 232 aa17.19■□□□□ 0.34
RCC1-211ENST00000478232 PPP1R12BO60237 982 aaPredicted RBP17.19■□□□□ 0.34
RCC1-211ENST00000478232 BCAMP50895 628 aa17.19■□□□□ 0.34
RCC1-211ENST00000478232 HDLBPQ00341 1268 aaKnown RBP17.19■□□□□ 0.34
RCC1-211ENST00000478232 PRKG1Q13976 671 aa17.19■□□□□ 0.34
RCC1-211ENST00000478232 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
RCC1-211ENST00000478232 LPIN2Q92539 896 aa17.19■□□□□ 0.34
RCC1-211ENST00000478232 MRIQ9BWK5 157 aa17.19■□□□□ 0.34
RCC1-211ENST00000478232 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
RCC1-211ENST00000478232 ANGEL1Q9UNK9 670 aaKnown RBP17.19■□□□□ 0.34
RCC1-211ENST00000478232 IQSEC3Q9UPP2 1182 aaPredicted RBP17.19■□□□□ 0.34
RCC1-211ENST00000478232 UNCXA6NJT0 531 aa17.18■□□□□ 0.34
RCC1-211ENST00000478232 CIAO1O76071 339 aa17.18■□□□□ 0.34
RCC1-211ENST00000478232 TM4SF4P48230 202 aa17.18■□□□□ 0.34
RCC1-211ENST00000478232 CHAF1AQ13111 956 aaPredicted RBP17.18■□□□□ 0.34
RCC1-211ENST00000478232 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
RCC1-211ENST00000478232 MAP3K11Q16584 847 aa17.18■□□□□ 0.34
RCC1-211ENST00000478232 ATG9AQ7Z3C6 839 aa17.18■□□□□ 0.34
RCC1-211ENST00000478232 DZIP1LQ8IYY4 767 aaKnown RBP17.18■□□□□ 0.34
RCC1-211ENST00000478232 CEP126Q9P2H0 1117 aa17.18■□□□□ 0.34
RCC1-211ENST00000478232 ZNF70Q9UC06 446 aaPredicted RBP17.18■□□□□ 0.34
RCC1-211ENST00000478232 SLC5A1P13866 664 aa17.17■□□□□ 0.34
RCC1-211ENST00000478232 CRKP46108 304 aa17.17■□□□□ 0.34
RCC1-211ENST00000478232 RASA3Q14644 834 aa17.17■□□□□ 0.34
RCC1-211ENST00000478232 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
RCC1-211ENST00000478232 MIER1Q8N108 512 aa17.17■□□□□ 0.34
RCC1-211ENST00000478232 SLC10A4Q96EP9 437 aa17.17■□□□□ 0.34
RCC1-211ENST00000478232 TDRD3Q9H7E2 651 aaKnown RBP17.17■□□□□ 0.34
RCC1-211ENST00000478232 SUGT1Q9Y2Z0 365 aa17.17■□□□□ 0.34
RCC1-211ENST00000478232 LRRFIP2Q9Y608 721 aaKnown RBP17.17■□□□□ 0.34
RCC1-211ENST00000478232 GNAI3P08754 354 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms