RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 RSBN1LQ6PCB5 846 aaPredicted RBP12.15□□□□□ -0.46
NIFK-205ENST00000477693 ZNF804AQ7Z570 1209 aa12.15□□□□□ -0.46
NIFK-205ENST00000477693 AGBL3Q8NEM8 1001 aa12.15□□□□□ -0.46
NIFK-205ENST00000477693 EXOC6Q8TAG9 804 aa12.15□□□□□ -0.46
NIFK-205ENST00000477693 CD209Q9NNX6 404 aa12.15□□□□□ -0.46
NIFK-205ENST00000477693 ZBTB40Q9NUA8 1239 aa12.15□□□□□ -0.46
NIFK-205ENST00000477693 CNOT7Q9UIV1 285 aaKnown RBP12.15□□□□□ -0.46
NIFK-205ENST00000477693 ZNF646O15015 1829 aaPredicted RBP12.14□□□□□ -0.47
NIFK-205ENST00000477693 SLC34A2O95436 690 aa12.14□□□□□ -0.47
NIFK-205ENST00000477693 FGFR2P21802 821 aa12.14□□□□□ -0.47
NIFK-205ENST00000477693 IL15P40933 162 aaPredicted RBP12.14□□□□□ -0.47
NIFK-205ENST00000477693 IRX6P78412 446 aaPredicted RBP12.14□□□□□ -0.47
NIFK-205ENST00000477693 PUM3Q15397 648 aaKnown RBP12.14□□□□□ -0.47
NIFK-205ENST00000477693 EAPPQ56P03 285 aaPredicted RBP12.14□□□□□ -0.47
NIFK-205ENST00000477693 DACT2Q5SW24 774 aa12.14□□□□□ -0.47
NIFK-205ENST00000477693 MICALL2Q8IY33 904 aa12.14□□□□□ -0.47
NIFK-205ENST00000477693 GMLQ99445 158 aa12.14□□□□□ -0.47
NIFK-205ENST00000477693 SIL1Q9H173 461 aa12.14□□□□□ -0.47
NIFK-205ENST00000477693 PA2G4Q9UQ80 394 aaKnown RBP12.14□□□□□ -0.47
NIFK-205ENST00000477693 MYO3BQ8WXR4 1341 aa12.13□□□□□ -0.47
NIFK-205ENST00000477693 PNMA6EA0A0J9YXQ4 647 aa12.13□□□□□ -0.47
NIFK-205ENST00000477693 H7C1D1 291 aa12.13□□□□□ -0.47
NIFK-205ENST00000477693 HTRA3P83110 453 aa12.13□□□□□ -0.47
NIFK-205ENST00000477693 TTLL5Q6EMB2 1281 aa12.13□□□□□ -0.47
NIFK-205ENST00000477693 CCDC136Q96JN2 1154 aa12.13□□□□□ -0.47
NIFK-205ENST00000477693 FAM84BQ96KN1 310 aaPredicted RBP12.13□□□□□ -0.47
NIFK-205ENST00000477693 SHTN1A0MZ66 631 aa12.12□□□□□ -0.47
NIFK-205ENST00000477693 HIBADHP31937 336 aaKnown RBP12.12□□□□□ -0.47
NIFK-205ENST00000477693 GYG1P46976 350 aa12.12□□□□□ -0.47
NIFK-205ENST00000477693 MMP14P50281 582 aa12.12□□□□□ -0.47
NIFK-205ENST00000477693 ZNF280AP59817 542 aaPredicted RBP12.12□□□□□ -0.47
NIFK-205ENST00000477693 ATP8B2P98198 1209 aa12.12□□□□□ -0.47
NIFK-205ENST00000477693 FBXO33Q7Z6M2 555 aa12.12□□□□□ -0.47
NIFK-205ENST00000477693 SSH3Q8TE77 659 aa12.12□□□□□ -0.47
NIFK-205ENST00000477693 LPIN2Q92539 896 aa12.12□□□□□ -0.47
NIFK-205ENST00000477693 CEP126Q9P2H0 1117 aa12.12□□□□□ -0.47
NIFK-205ENST00000477693 SASH1O94885 1247 aa12.11□□□□□ -0.47
NIFK-205ENST00000477693 IFIT1P09914 478 aaKnown RBP12.11□□□□□ -0.47
NIFK-205ENST00000477693 HIRAP54198 1017 aaPredicted RBP12.11□□□□□ -0.47
NIFK-205ENST00000477693 FKBP1AP62942 108 aaKnown RBP12.11□□□□□ -0.47
NIFK-205ENST00000477693 GTF2IP78347 998 aa12.11□□□□□ -0.47
NIFK-205ENST00000477693 CAVIN4Q5BKX8 364 aa12.11□□□□□ -0.47
NIFK-205ENST00000477693 RPAP2Q8IXW5 612 aaPredicted RBP12.11□□□□□ -0.47
NIFK-205ENST00000477693 TDRD7Q8NHU6 1098 aaKnown RBP12.11□□□□□ -0.47
NIFK-205ENST00000477693 TRPM4Q8TD43 1214 aa12.11□□□□□ -0.47
NIFK-205ENST00000477693 ZC3H15Q8WU90 426 aaKnown RBP12.11□□□□□ -0.47
NIFK-205ENST00000477693 RWDD1Q9H446 243 aaPredicted RBP12.11□□□□□ -0.47
NIFK-205ENST00000477693 C1orf115Q9H7X2 142 aa12.11□□□□□ -0.47
NIFK-205ENST00000477693 PGAP2Q9UHJ9 254 aa12.11□□□□□ -0.47
NIFK-205ENST00000477693 PASKQ96RG2 1323 aa12.11□□□□□ -0.47
NIFK-205ENST00000477693 ITGBL1O95965 494 aaPredicted RBP12.1□□□□□ -0.47
NIFK-205ENST00000477693 EGFRP00533 1210 aa12.1□□□□□ -0.47
NIFK-205ENST00000477693 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
NIFK-205ENST00000477693 SLC5A1P13866 664 aa12.1□□□□□ -0.47
NIFK-205ENST00000477693 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
NIFK-205ENST00000477693 ATP2B3Q16720 1220 aa12.1□□□□□ -0.47
NIFK-205ENST00000477693 MAP1SQ66K74 1059 aaPredicted RBP12.1□□□□□ -0.47
NIFK-205ENST00000477693 CEP85Q6P2H3 762 aa12.1□□□□□ -0.47
NIFK-205ENST00000477693 SAMD7Q7Z3H4 446 aa12.1□□□□□ -0.47
NIFK-205ENST00000477693 VPS37DQ86XT2 251 aa12.1□□□□□ -0.47
NIFK-205ENST00000477693 FBXW7Q969H0 707 aa12.1□□□□□ -0.47
NIFK-205ENST00000477693 FAM205AQ6ZU69 1335 aa12.1□□□□□ -0.47
NIFK-205ENST00000477693 HDAC1Q13547 482 aaPredicted RBP12.09□□□□□ -0.47
NIFK-205ENST00000477693 KIF4BQ2VIQ3 1234 aa12.09□□□□□ -0.47
NIFK-205ENST00000477693 CNTROBQ8N137 903 aa12.09□□□□□ -0.47
NIFK-205ENST00000477693 MXD3Q9BW11 206 aa12.09□□□□□ -0.47
NIFK-205ENST00000477693 MYOZ2Q9NPC6 264 aa12.09□□□□□ -0.47
NIFK-205ENST00000477693 HMMRO75330 724 aa12.08□□□□□ -0.48
NIFK-205ENST00000477693 BCAMP50895 628 aa12.08□□□□□ -0.48
NIFK-205ENST00000477693 TFCP2Q12800 502 aa12.08□□□□□ -0.48
NIFK-205ENST00000477693 G3BP1Q13283 466 aaKnown RBP eCLIP12.08□□□□□ -0.48
NIFK-205ENST00000477693 TBC1D10BQ4KMP7 808 aaPredicted RBP12.08□□□□□ -0.48
NIFK-205ENST00000477693 CENPQQ7L2Z9 268 aaPredicted RBP12.08□□□□□ -0.48
NIFK-205ENST00000477693 OGFOD1Q8N543 542 aa12.08□□□□□ -0.48
NIFK-205ENST00000477693 CERS5Q8N5B7 392 aa12.08□□□□□ -0.48
NIFK-205ENST00000477693 AKAP2Q9Y2D5 859 aa12.08□□□□□ -0.48
NIFK-205ENST00000477693 NOP58Q9Y2X3 529 aaKnown RBP12.08□□□□□ -0.48
NIFK-205ENST00000477693 PCNTO95613 3336 aa12.08□□□□□ -0.48
NIFK-205ENST00000477693 ARAP2Q8WZ64 1704 aa12.08□□□□□ -0.48
NIFK-205ENST00000477693 HSPA1AP0DMV8 641 aaKnown RBP12.07□□□□□ -0.48
NIFK-205ENST00000477693 HSPA1BP0DMV9 641 aaKnown RBP12.07□□□□□ -0.48
NIFK-205ENST00000477693 HDAC9Q9UKV0 1011 aa12.07□□□□□ -0.48
NIFK-205ENST00000477693 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.07□□□□□ -0.48
NIFK-205ENST00000477693 A0A1B0GUL7 405 aa12.06□□□□□ -0.48
NIFK-205ENST00000477693 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
NIFK-205ENST00000477693 MFSD14BQ5SR56 506 aa12.06□□□□□ -0.48
NIFK-205ENST00000477693 RBM26Q5T8P6 1007 aaKnown RBP12.06□□□□□ -0.48
NIFK-205ENST00000477693 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
NIFK-205ENST00000477693 TBC1D22AQ8WUA7 517 aa12.06□□□□□ -0.48
NIFK-205ENST00000477693 GPR108Q9NPR9 543 aa12.06□□□□□ -0.48
NIFK-205ENST00000477693 IQSEC3Q9UPP2 1182 aaPredicted RBP12.06□□□□□ -0.48
NIFK-205ENST00000477693 JAG2Q9Y219 1238 aa12.06□□□□□ -0.48
NIFK-205ENST00000477693 PITPNM2Q9BZ72 1349 aa12.06□□□□□ -0.48
NIFK-205ENST00000477693 WNT10BO00744 389 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 SEMA3EO15041 775 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 FRAT2O75474 233 aaPredicted RBP12.05□□□□□ -0.48
NIFK-205ENST00000477693 ADORA1P30542 326 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 TIMM10P62072 90 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 SCARF1Q14162 830 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 CCDC102BQ68D86 513 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms