RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 PDS5AQ29RF7 1337 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-205ENST00000477360 GYG1P46976 350 aa15.3■□□□□ 0.04
CLCNKA-205ENST00000477360 HDLBPQ00341 1268 aaKnown RBP15.3■□□□□ 0.04
CLCNKA-205ENST00000477360 G3BP1Q13283 466 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLCNKA-205ENST00000477360 MAP1SQ66K74 1059 aaPredicted RBP15.3■□□□□ 0.04
CLCNKA-205ENST00000477360 CEP85Q6P2H3 762 aa15.3■□□□□ 0.04
CLCNKA-205ENST00000477360 TRPM4Q8TD43 1214 aa15.3■□□□□ 0.04
CLCNKA-205ENST00000477360 SIL1Q9H173 461 aa15.3■□□□□ 0.04
CLCNKA-205ENST00000477360 PA2G4Q9UQ80 394 aaKnown RBP15.3■□□□□ 0.04
CLCNKA-205ENST00000477360 IGSF3O75054 1194 aa15.29■□□□□ 0.04
CLCNKA-205ENST00000477360 HMMRO75330 724 aa15.29■□□□□ 0.04
CLCNKA-205ENST00000477360 HSP90AB4PQ58FF6 505 aa15.29■□□□□ 0.04
CLCNKA-205ENST00000477360 SAMD7Q7Z3H4 446 aa15.29■□□□□ 0.04
CLCNKA-205ENST00000477360 WDR66Q8TBY9 1149 aa15.29■□□□□ 0.04
CLCNKA-205ENST00000477360 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-205ENST00000477360 TMEM88BA6NKF7 163 aa15.28■□□□□ 0.04
CLCNKA-205ENST00000477360 CENPBP07199 599 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-205ENST00000477360 TBC1D10BQ4KMP7 808 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-205ENST00000477360 MFSD14BQ5SR56 506 aa15.28■□□□□ 0.04
CLCNKA-205ENST00000477360 ERC1Q8IUD2 1116 aa15.28■□□□□ 0.04
CLCNKA-205ENST00000477360 CERS5Q8N5B7 392 aa15.28■□□□□ 0.04
CLCNKA-205ENST00000477360 DCPSQ96C86 337 aaKnown RBP15.28■□□□□ 0.04
CLCNKA-205ENST00000477360 ZBED3Q96IU2 234 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-205ENST00000477360 SERPINA10Q9UK55 444 aa15.28■□□□□ 0.04
CLCNKA-205ENST00000477360 MAST3O60307 1309 aa15.27■□□□□ 0.04
CLCNKA-205ENST00000477360 SALL1Q9NSC2 1324 aa15.27■□□□□ 0.04
CLCNKA-205ENST00000477360 SHTN1A0MZ66 631 aa15.27■□□□□ 0.04
CLCNKA-205ENST00000477360 BCAMP50895 628 aa15.27■□□□□ 0.04
CLCNKA-205ENST00000477360 AAMPQ13685 434 aa15.27■□□□□ 0.04
CLCNKA-205ENST00000477360 DNAJC5GQ8N7S2 189 aa15.27■□□□□ 0.04
CLCNKA-205ENST00000477360 DENND2AQ9ULE3 1009 aa15.27■□□□□ 0.04
CLCNKA-205ENST00000477360 COG6Q9Y2V7 657 aa15.27■□□□□ 0.04
CLCNKA-205ENST00000477360 WNT10BO00744 389 aa15.26■□□□□ 0.03
CLCNKA-205ENST00000477360 FRAT2O75474 233 aaPredicted RBP15.26■□□□□ 0.03
CLCNKA-205ENST00000477360 TFCP2Q12800 502 aa15.26■□□□□ 0.03
CLCNKA-205ENST00000477360 SCARF1Q14162 830 aa15.26■□□□□ 0.03
CLCNKA-205ENST00000477360 KIAA0825Q8IV33 1275 aa15.26■□□□□ 0.03
CLCNKA-205ENST00000477360 SULF1Q8IWU6 871 aa15.26■□□□□ 0.03
CLCNKA-205ENST00000477360 FBXW7Q969H0 707 aa15.26■□□□□ 0.03
CLCNKA-205ENST00000477360 HHIPL1Q96JK4 782 aa15.26■□□□□ 0.03
CLCNKA-205ENST00000477360 A0A1B0GUL7 405 aa15.25■□□□□ 0.03
CLCNKA-205ENST00000477360 SURF6O75683 361 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-205ENST00000477360 EGFRP00533 1210 aa15.25■□□□□ 0.03
CLCNKA-205ENST00000477360 KRT26Q7Z3Y9 468 aa15.25■□□□□ 0.03
CLCNKA-205ENST00000477360 APOBEC3FQ8IUX4 373 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-205ENST00000477360 ZGPATQ8N5A5 531 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-205ENST00000477360 ZNF512BQ96KM6 892 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-205ENST00000477360 COL1A1P02452 1464 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-205ENST00000477360 MYO1BO43795 1136 aa15.24■□□□□ 0.03
CLCNKA-205ENST00000477360 RRP1P56182 461 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-205ENST00000477360 DLGAP5Q15398 846 aa15.24■□□□□ 0.03
CLCNKA-205ENST00000477360 CCDC102BQ68D86 513 aa15.24■□□□□ 0.03
CLCNKA-205ENST00000477360 KLRG1Q96E93 195 aa15.24■□□□□ 0.03
CLCNKA-205ENST00000477360 XAGE2Q96GT9 111 aa15.24■□□□□ 0.03
CLCNKA-205ENST00000477360 MXD3Q9BW11 206 aa15.24■□□□□ 0.03
CLCNKA-205ENST00000477360 C1orf115Q9H7X2 142 aa15.24■□□□□ 0.03
CLCNKA-205ENST00000477360 GGA3Q9NZ52 723 aa15.24■□□□□ 0.03
CLCNKA-205ENST00000477360 PPP2R3BQ9Y5P8 575 aa15.24■□□□□ 0.03
CLCNKA-205ENST00000477360 ARAP2Q8WZ64 1704 aa15.23■□□□□ 0.03
CLCNKA-205ENST00000477360 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
CLCNKA-205ENST00000477360 RASSF10A6NK89 507 aa15.23■□□□□ 0.03
CLCNKA-205ENST00000477360 RAB11FIP3O75154 756 aa15.23■□□□□ 0.03
CLCNKA-205ENST00000477360 UQCRFS1P1P0C7P4 283 aa15.23■□□□□ 0.03
CLCNKA-205ENST00000477360 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
CLCNKA-205ENST00000477360 FKBP1BP68106 108 aa15.23■□□□□ 0.03
CLCNKA-205ENST00000477360 RBM26Q5T8P6 1007 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-205ENST00000477360 TIMM10P62072 90 aa15.22■□□□□ 0.03
CLCNKA-205ENST00000477360 OS9Q13438 667 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-205ENST00000477360 NBPF9Q3BBW0 867 aa15.22■□□□□ 0.03
CLCNKA-205ENST00000477360 ANGEL2Q5VTE6 544 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-205ENST00000477360 HHIPL2Q6UWX4 724 aa15.22■□□□□ 0.03
CLCNKA-205ENST00000477360 JMYQ8N9B5 988 aa15.22■□□□□ 0.03
CLCNKA-205ENST00000477360 GLIS2Q9BZE0 524 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-205ENST00000477360 TTF2Q9UNY4 1162 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-205ENST00000477360 ARID4AP29374 1257 aaPredicted RBP15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 PHKA1P46020 1223 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 CFAP100Q494V2 611 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 TNNI3KQ59H18 835 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 C20orf194Q5TEA3 1177 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 FKBP1CQ5VVH2 108 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 CST9Q5W186 159 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 TMED8Q6PL24 325 aaPredicted RBP15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 USP48Q86UV5 1035 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 TEKT1Q969V4 418 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 ZDHHC15Q96MV8 337 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 TLL2Q9Y6L7 1015 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 FPGT-TNNI3KV9GXZ4 949 aa15.21■□□□□ 0.03
CLCNKA-205ENST00000477360 CNTNAP1P78357 1384 aa15.21■□□□□ 0.02
CLCNKA-205ENST00000477360 TRAF5O00463 557 aa15.2■□□□□ 0.02
CLCNKA-205ENST00000477360 CELF2O95319 508 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-205ENST00000477360 CHAF1AQ13111 956 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-205ENST00000477360 TNFAIP1Q13829 316 aa15.2■□□□□ 0.02
CLCNKA-205ENST00000477360 GORABQ5T7V8 394 aa15.2■□□□□ 0.02
CLCNKA-205ENST00000477360 SPTY2D1Q68D10 685 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-205ENST00000477360 SLF2Q8IX21 1173 aa15.2■□□□□ 0.02
CLCNKA-205ENST00000477360 SIRT2Q8IXJ6 389 aa15.2■□□□□ 0.02
CLCNKA-205ENST00000477360 NEUROD6Q96NK8 337 aa15.2■□□□□ 0.02
CLCNKA-205ENST00000477360 CEP350Q5VT06 3117 aa15.2■□□□□ 0.02
CLCNKA-205ENST00000477360 UNCXA6NJT0 531 aa15.19■□□□□ 0.02
CLCNKA-205ENST00000477360 ADORA1P30542 326 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms