RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 RARSP54136 660 aaKnown RBP13.56□□□□□ -0.24
SEC13-214ENST00000476597 PRAMEF18Q5VWM3 479 aa13.56□□□□□ -0.24
SEC13-214ENST00000476597 MTMR14Q8NCE2 650 aa13.56□□□□□ -0.24
SEC13-214ENST00000476597 FAM205AQ6ZU69 1335 aa13.56□□□□□ -0.24
SEC13-214ENST00000476597 PDE8BO95263 885 aa13.55□□□□□ -0.24
SEC13-214ENST00000476597 GYG1P46976 350 aa13.55□□□□□ -0.24
SEC13-214ENST00000476597 RFX5P48382 616 aaPredicted RBP13.55□□□□□ -0.24
SEC13-214ENST00000476597 DLGAP5Q15398 846 aa13.55□□□□□ -0.24
SEC13-214ENST00000476597 FBXO33Q7Z6M2 555 aa13.55□□□□□ -0.24
SEC13-214ENST00000476597 API5Q9BZZ5 524 aaKnown RBP13.55□□□□□ -0.24
SEC13-214ENST00000476597 JAG2Q9Y219 1238 aa13.55□□□□□ -0.24
SEC13-214ENST00000476597 F8W031 263 aaPredicted RBP13.54□□□□□ -0.24
SEC13-214ENST00000476597 SLC10A3P09131 477 aa13.54□□□□□ -0.24
SEC13-214ENST00000476597 KIF23Q02241 960 aaPredicted RBP13.54□□□□□ -0.24
SEC13-214ENST00000476597 METTL24Q5JXM2 366 aa13.54□□□□□ -0.24
SEC13-214ENST00000476597 VGLL2Q8N8G2 317 aa13.54□□□□□ -0.24
SEC13-214ENST00000476597 KLHDC4Q8TBB5 520 aa13.54□□□□□ -0.24
SEC13-214ENST00000476597 ARHGAP45Q92619 1136 aa13.54□□□□□ -0.24
SEC13-214ENST00000476597 PSME4Q14997 1843 aa13.53□□□□□ -0.24
SEC13-214ENST00000476597 SPEF2Q9C093 1822 aa13.53□□□□□ -0.24
SEC13-214ENST00000476597 PTPN12Q05209 780 aaKnown RBP13.53□□□□□ -0.24
SEC13-214ENST00000476597 CFAP100Q494V2 611 aa13.53□□□□□ -0.24
SEC13-214ENST00000476597 MOB2Q70IA6 237 aa13.53□□□□□ -0.24
SEC13-214ENST00000476597 APOBEC3FQ8IUX4 373 aaKnown RBP13.53□□□□□ -0.24
SEC13-214ENST00000476597 MIER1Q8N108 512 aa13.53□□□□□ -0.24
SEC13-214ENST00000476597 PRMT6Q96LA8 375 aaPredicted RBP13.53□□□□□ -0.24
SEC13-214ENST00000476597 TSKSQ9UJT2 592 aa13.53□□□□□ -0.24
SEC13-214ENST00000476597 PCDHAC2Q9Y5I4 1007 aa13.53□□□□□ -0.24
SEC13-214ENST00000476597 THSD7BQ9C0I4 1608 aa13.53□□□□□ -0.24
SEC13-214ENST00000476597 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
SEC13-214ENST00000476597 UBE2Q2LH0YL09 131 aa13.52□□□□□ -0.25
SEC13-214ENST00000476597 EYA2O00167 538 aa13.52□□□□□ -0.25
SEC13-214ENST00000476597 CAPN15O75808 1086 aa13.52□□□□□ -0.25
SEC13-214ENST00000476597 UBTFL1P0CB47 393 aaPredicted RBP13.52□□□□□ -0.25
SEC13-214ENST00000476597 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
SEC13-214ENST00000476597 FGFR2P21802 821 aa13.52□□□□□ -0.25
SEC13-214ENST00000476597 CAVIN4Q5BKX8 364 aa13.52□□□□□ -0.25
SEC13-214ENST00000476597 MFSD14BQ5SR56 506 aa13.52□□□□□ -0.25
SEC13-214ENST00000476597 CSRNP1Q96S65 589 aa13.52□□□□□ -0.25
SEC13-214ENST00000476597 DEFB129Q9H1M3 183 aa13.52□□□□□ -0.25
SEC13-214ENST00000476597 POLR2AP24928 1970 aaKnown RBP13.51□□□□□ -0.25
SEC13-214ENST00000476597 NF2P35240 595 aa13.51□□□□□ -0.25
SEC13-214ENST00000476597 BCAMP50895 628 aa13.51□□□□□ -0.25
SEC13-214ENST00000476597 INTS3Q68E01 1043 aaKnown RBP13.51□□□□□ -0.25
SEC13-214ENST00000476597 ATG9AQ7Z3C6 839 aa13.51□□□□□ -0.25
SEC13-214ENST00000476597 VPS37DQ86XT2 251 aa13.51□□□□□ -0.25
SEC13-214ENST00000476597 RASAL3Q86YV0 1011 aa13.51□□□□□ -0.25
SEC13-214ENST00000476597 FBXO3Q9UK99 471 aa13.51□□□□□ -0.25
SEC13-214ENST00000476597 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
SEC13-214ENST00000476597 MYO1BO43795 1136 aa13.5□□□□□ -0.25
SEC13-214ENST00000476597 IFIT1P09914 478 aaKnown RBP13.5□□□□□ -0.25
SEC13-214ENST00000476597 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
SEC13-214ENST00000476597 TTLL12Q14166 644 aaPredicted RBP13.5□□□□□ -0.25
SEC13-214ENST00000476597 PUM3Q15397 648 aaKnown RBP13.5□□□□□ -0.25
SEC13-214ENST00000476597 DIEXFQ68CQ4 756 aaKnown RBP13.5□□□□□ -0.25
SEC13-214ENST00000476597 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
SEC13-214ENST00000476597 RNF186Q9NXI6 227 aa13.5□□□□□ -0.25
SEC13-214ENST00000476597 SERPINA10Q9UK55 444 aa13.5□□□□□ -0.25
SEC13-214ENST00000476597 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
SEC13-214ENST00000476597 AOX1Q06278 1338 aa13.49□□□□□ -0.25
SEC13-214ENST00000476597 KIF16BQ96L93 1317 aa13.49□□□□□ -0.25
SEC13-214ENST00000476597 ZNF646O15015 1829 aaPredicted RBP13.49□□□□□ -0.25
SEC13-214ENST00000476597 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
SEC13-214ENST00000476597 LDLRAD1Q5T700 205 aa13.49□□□□□ -0.25
SEC13-214ENST00000476597 ARMC9Q7Z3E5 817 aa13.49□□□□□ -0.25
SEC13-214ENST00000476597 LPIN2Q92539 896 aa13.49□□□□□ -0.25
SEC13-214ENST00000476597 SAGE1Q9NXZ1 904 aa13.49□□□□□ -0.25
SEC13-214ENST00000476597 IQSEC3Q9UPP2 1182 aaPredicted RBP13.49□□□□□ -0.25
SEC13-214ENST00000476597 PPP2R3BQ9Y5P8 575 aa13.49□□□□□ -0.25
SEC13-214ENST00000476597 LRRFIP2Q9Y608 721 aaKnown RBP13.49□□□□□ -0.25
SEC13-214ENST00000476597 IPO8O15397 1037 aaKnown RBP13.48□□□□□ -0.25
SEC13-214ENST00000476597 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
SEC13-214ENST00000476597 CIAO1O76071 339 aa13.48□□□□□ -0.25
SEC13-214ENST00000476597 HDLBPQ00341 1268 aaKnown RBP13.48□□□□□ -0.25
SEC13-214ENST00000476597 PRKG1Q13976 671 aa13.48□□□□□ -0.25
SEC13-214ENST00000476597 GRIK5Q16478 980 aa13.48□□□□□ -0.25
SEC13-214ENST00000476597 TBC1D22AQ8WUA7 517 aa13.48□□□□□ -0.25
SEC13-214ENST00000476597 MEIS3Q99687 375 aa13.48□□□□□ -0.25
SEC13-214ENST00000476597 MRIQ9BWK5 157 aa13.48□□□□□ -0.25
SEC13-214ENST00000476597 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
SEC13-214ENST00000476597 TRPA1O75762 1119 aa13.47□□□□□ -0.25
SEC13-214ENST00000476597 BCAR3O75815 825 aa13.47□□□□□ -0.25
SEC13-214ENST00000476597 CRKP46108 304 aa13.47□□□□□ -0.25
SEC13-214ENST00000476597 CHAF1AQ13111 956 aaPredicted RBP13.47□□□□□ -0.25
SEC13-214ENST00000476597 RASA3Q14644 834 aa13.47□□□□□ -0.25
SEC13-214ENST00000476597 MAP3K11Q16584 847 aa13.47□□□□□ -0.25
SEC13-214ENST00000476597 SUPT20HL1Q3ZLR7 823 aa13.47□□□□□ -0.25
SEC13-214ENST00000476597 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
SEC13-214ENST00000476597 DZIP1LQ8IYY4 767 aaKnown RBP13.47□□□□□ -0.25
SEC13-214ENST00000476597 TDRD3Q9H7E2 651 aaKnown RBP13.47□□□□□ -0.25
SEC13-214ENST00000476597 COPRSQ9NQ92 184 aa13.47□□□□□ -0.25
SEC13-214ENST00000476597 CEP126Q9P2H0 1117 aa13.47□□□□□ -0.25
SEC13-214ENST00000476597 ZNF70Q9UC06 446 aaPredicted RBP13.47□□□□□ -0.25
SEC13-214ENST00000476597 ANGEL1Q9UNK9 670 aaKnown RBP13.47□□□□□ -0.25
SEC13-214ENST00000476597 GNAI3P08754 354 aa13.46□□□□□ -0.25
SEC13-214ENST00000476597 SLC5A1P13866 664 aa13.46□□□□□ -0.25
SEC13-214ENST00000476597 TRIM27P14373 513 aa13.46□□□□□ -0.25
SEC13-214ENST00000476597 IL15P40933 162 aaPredicted RBP13.46□□□□□ -0.25
SEC13-214ENST00000476597 TM4SF4P48230 202 aa13.46□□□□□ -0.25
SEC13-214ENST00000476597 NBPF12Q5TAG4 269 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms