RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 AOX1Q06278 1338 aa16.66■□□□□ 0.26
MRPL55-228ENST00000476267 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-228ENST00000476267 ALDH1L1O75891 902 aa16.65■□□□□ 0.26
MRPL55-228ENST00000476267 NF2P35240 595 aa16.65■□□□□ 0.26
MRPL55-228ENST00000476267 MAP3K11Q16584 847 aa16.65■□□□□ 0.26
MRPL55-228ENST00000476267 NOM1Q5C9Z4 860 aaKnown RBP16.65■□□□□ 0.26
MRPL55-228ENST00000476267 ZNF804AQ7Z570 1209 aa16.65■□□□□ 0.26
MRPL55-228ENST00000476267 CFHR5Q9BXR6 569 aa16.65■□□□□ 0.26
MRPL55-228ENST00000476267 OTOFQ9HC10 1997 aa16.65■□□□□ 0.26
MRPL55-228ENST00000476267 UTYO14607 1347 aa16.65■□□□□ 0.26
MRPL55-228ENST00000476267 SPDYE2BA6NHP3 402 aa16.64■□□□□ 0.25
MRPL55-228ENST00000476267 SPDYE6P0CI01 402 aa16.64■□□□□ 0.25
MRPL55-228ENST00000476267 TTLL12Q14166 644 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-228ENST00000476267 DLGAP5Q15398 846 aa16.64■□□□□ 0.25
MRPL55-228ENST00000476267 LDHAL6AQ6ZMR3 332 aa16.64■□□□□ 0.25
MRPL55-228ENST00000476267 DEFB129Q9H1M3 183 aa16.64■□□□□ 0.25
MRPL55-228ENST00000476267 FZD1Q9UP38 647 aa16.64■□□□□ 0.25
MRPL55-228ENST00000476267 CHMP3Q9Y3E7 222 aa16.64■□□□□ 0.25
MRPL55-228ENST00000476267 TBC1D8O95759 1140 aa16.63■□□□□ 0.25
MRPL55-228ENST00000476267 CCDC57Q2TAC2 916 aa16.63■□□□□ 0.25
MRPL55-228ENST00000476267 ARMC9Q7Z3E5 817 aa16.63■□□□□ 0.25
MRPL55-228ENST00000476267 ZNF296Q8WUU4 475 aaPredicted RBP16.63■□□□□ 0.25
MRPL55-228ENST00000476267 SUCLG2Q96I99 432 aa16.63■□□□□ 0.25
MRPL55-228ENST00000476267 PRMT6Q96LA8 375 aaPredicted RBP16.63■□□□□ 0.25
MRPL55-228ENST00000476267 PPP2R3BQ9Y5P8 575 aa16.63■□□□□ 0.25
MRPL55-228ENST00000476267 FAM205AQ6ZU69 1335 aa16.63■□□□□ 0.25
MRPL55-228ENST00000476267 NBPF7P0C2Y1 421 aaPredicted RBP16.62■□□□□ 0.25
MRPL55-228ENST00000476267 PRKG1Q13976 671 aa16.62■□□□□ 0.25
MRPL55-228ENST00000476267 CFAP100Q494V2 611 aa16.62■□□□□ 0.25
MRPL55-228ENST00000476267 SPRYD7Q5W111 196 aa16.62■□□□□ 0.25
MRPL55-228ENST00000476267 TDRD7Q8NHU6 1098 aaKnown RBP16.62■□□□□ 0.25
MRPL55-228ENST00000476267 SRCIN1Q9C0H9 1055 aa16.62■□□□□ 0.25
MRPL55-228ENST00000476267 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
MRPL55-228ENST00000476267 HTTP42858 3142 aa16.62■□□□□ 0.25
MRPL55-228ENST00000476267 F8W031 263 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-228ENST00000476267 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-228ENST00000476267 SREBF2Q12772 1141 aa16.61■□□□□ 0.25
MRPL55-228ENST00000476267 MKRN3Q13064 507 aaKnown RBP16.61■□□□□ 0.25
MRPL55-228ENST00000476267 UBE4AQ14139 1066 aa16.61■□□□□ 0.25
MRPL55-228ENST00000476267 RABL6Q3YEC7 729 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-228ENST00000476267 PUS3Q9BZE2 481 aaKnown RBP16.61■□□□□ 0.25
MRPL55-228ENST00000476267 R3HDMLQ9H3Y0 253 aa16.61■□□□□ 0.25
MRPL55-228ENST00000476267 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
MRPL55-228ENST00000476267 C9orf78Q9NZ63 289 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-228ENST00000476267 JAG2Q9Y219 1238 aa16.61■□□□□ 0.25
MRPL55-228ENST00000476267 CLRN2A0PK11 232 aa16.6■□□□□ 0.25
MRPL55-228ENST00000476267 GPR25O00155 361 aa16.6■□□□□ 0.25
MRPL55-228ENST00000476267 SLC4A10Q6U841 1118 aa16.6■□□□□ 0.25
MRPL55-228ENST00000476267 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
MRPL55-228ENST00000476267 FAM84BQ96KN1 310 aaPredicted RBP16.6■□□□□ 0.25
MRPL55-228ENST00000476267 HPS5Q9UPZ3 1129 aa16.6■□□□□ 0.25
MRPL55-228ENST00000476267 RIPOR2Q9Y4F9 1068 aa16.6■□□□□ 0.25
MRPL55-228ENST00000476267 UNCXA6NJT0 531 aa16.59■□□□□ 0.25
MRPL55-228ENST00000476267 PLIN1O60240 522 aa16.59■□□□□ 0.25
MRPL55-228ENST00000476267 SLC34A2O95436 690 aa16.59■□□□□ 0.25
MRPL55-228ENST00000476267 SOX10P56693 466 aa16.59■□□□□ 0.25
MRPL55-228ENST00000476267 TAF7LQ5H9L4 462 aa16.59■□□□□ 0.25
MRPL55-228ENST00000476267 MRPL50Q8N5N7 158 aaKnown RBP16.59■□□□□ 0.25
MRPL55-228ENST00000476267 ANKRD44Q8N8A2 993 aa16.59■□□□□ 0.25
MRPL55-228ENST00000476267 CLMNQ96JQ2 1002 aa16.59■□□□□ 0.25
MRPL55-228ENST00000476267 MYO1BO43795 1136 aa16.58■□□□□ 0.24
MRPL55-228ENST00000476267 ZBTB48P10074 688 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-228ENST00000476267 GYG1P46976 350 aa16.58■□□□□ 0.24
MRPL55-228ENST00000476267 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.24
MRPL55-228ENST00000476267 NBPF12Q5TAG4 269 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-228ENST00000476267 VGLL2Q8N8G2 317 aa16.58■□□□□ 0.24
MRPL55-228ENST00000476267 WNK4Q96J92 1243 aa16.58■□□□□ 0.24
MRPL55-228ENST00000476267 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.24
MRPL55-228ENST00000476267 MROH5Q6ZUA9 1318 aa16.57■□□□□ 0.24
MRPL55-228ENST00000476267 RASA3Q14644 834 aa16.57■□□□□ 0.24
MRPL55-228ENST00000476267 SPDYE2Q495Y8 402 aa16.57■□□□□ 0.24
MRPL55-228ENST00000476267 MFSD14BQ5SR56 506 aa16.57■□□□□ 0.24
MRPL55-228ENST00000476267 SERPINA10Q9UK55 444 aa16.57■□□□□ 0.24
MRPL55-228ENST00000476267 MANSC4A6NHS7 340 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-228ENST00000476267 IGF2BP3O00425 579 aaKnown RBP eCLIP16.56■□□□□ 0.24
MRPL55-228ENST00000476267 PPP1R12BO60237 982 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-228ENST00000476267 USP2O75604 605 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-228ENST00000476267 HIBADHP31937 336 aaKnown RBP16.56■□□□□ 0.24
MRPL55-228ENST00000476267 GJA5P36382 358 aa16.56■□□□□ 0.24
MRPL55-228ENST00000476267 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
MRPL55-228ENST00000476267 FBXO33Q7Z6M2 555 aa16.56■□□□□ 0.24
MRPL55-228ENST00000476267 IFNL1Q8IU54 200 aa16.56■□□□□ 0.24
MRPL55-228ENST00000476267 TEPSINQ96N21 525 aa16.56■□□□□ 0.24
MRPL55-228ENST00000476267 VEZTQ9HBM0 779 aa16.56■□□□□ 0.24
MRPL55-228ENST00000476267 PTPRCP08575 1304 aa16.55■□□□□ 0.24
MRPL55-228ENST00000476267 ALDH1A1P00352 501 aa16.55■□□□□ 0.24
MRPL55-228ENST00000476267 INHBEP58166 350 aa16.55■□□□□ 0.24
MRPL55-228ENST00000476267 GRIK5Q16478 980 aa16.55■□□□□ 0.24
MRPL55-228ENST00000476267 LRRC24Q50LG9 513 aa16.55■□□□□ 0.24
MRPL55-228ENST00000476267 CDAN1Q8IWY9 1227 aa16.55■□□□□ 0.24
MRPL55-228ENST00000476267 SLC10A4Q96EP9 437 aa16.55■□□□□ 0.24
MRPL55-228ENST00000476267 ZNF70Q9UC06 446 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-228ENST00000476267 TTF2Q9UNY4 1162 aaKnown RBP16.55■□□□□ 0.24
MRPL55-228ENST00000476267 FKTNO75072 461 aa16.54■□□□□ 0.24
MRPL55-228ENST00000476267 FBXO46Q6PJ61 603 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-228ENST00000476267 TDRD3Q9H7E2 651 aaKnown RBP16.54■□□□□ 0.24
MRPL55-228ENST00000476267 CENPFP49454 3210 aa16.53■□□□□ 0.24
MRPL55-228ENST00000476267 TESPA1A2RU30 521 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-228ENST00000476267 RBM5P52756 815 aaKnown RBP eCLIP16.53■□□□□ 0.24
MRPL55-228ENST00000476267 DZIP1LQ8IYY4 767 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms