RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 MAP3K12Q12852 859 aa21.69■■□□□ 1.06
HIF3A-207ENST00000475432 UBE3CQ15386 1083 aa21.69■■□□□ 1.06
HIF3A-207ENST00000475432 TBC1D16Q8TBP0 767 aa21.69■■□□□ 1.06
HIF3A-207ENST00000475432 GPR101Q96P66 508 aaPredicted RBP21.69■■□□□ 1.06
HIF3A-207ENST00000475432 DAXXQ9UER7 740 aaPredicted RBP21.69■■□□□ 1.06
HIF3A-207ENST00000475432 POLLQ9UGP5 575 aa21.69■■□□□ 1.06
HIF3A-207ENST00000475432 RBM8AQ9Y5S9 174 aaKnown RBP21.69■■□□□ 1.06
HIF3A-207ENST00000475432 PDE6AP16499 860 aa21.68■■□□□ 1.06
HIF3A-207ENST00000475432 C10orf71Q711Q0 1435 aa21.68■■□□□ 1.06
HIF3A-207ENST00000475432 LRRC37AA6NMS7 1700 aa21.68■■□□□ 1.06
HIF3A-207ENST00000475432 ZBTB22O15209 634 aa21.68■■□□□ 1.06
HIF3A-207ENST00000475432 ZBTB7AO95365 584 aa21.68■■□□□ 1.06
HIF3A-207ENST00000475432 NECTIN1Q15223 517 aa21.68■■□□□ 1.06
HIF3A-207ENST00000475432 OLFM4Q6UX06 510 aa21.68■■□□□ 1.06
HIF3A-207ENST00000475432 PUS7LQ9H0K6 701 aaKnown RBP21.68■■□□□ 1.06
HIF3A-207ENST00000475432 PDS5AQ29RF7 1337 aaKnown RBP21.68■■□□□ 1.06
HIF3A-207ENST00000475432 ZNF532Q9HCE3 1301 aa21.67■■□□□ 1.06
HIF3A-207ENST00000475432 PRPF40BQ6NWY9 871 aaKnown RBP21.67■■□□□ 1.06
HIF3A-207ENST00000475432 ZNF804AQ7Z570 1209 aa21.67■■□□□ 1.06
HIF3A-207ENST00000475432 SNX21Q969T3 373 aa21.67■■□□□ 1.06
HIF3A-207ENST00000475432 LRP2BPQ9P2M1 347 aa21.67■■□□□ 1.06
HIF3A-207ENST00000475432 TCRBV5S4A2TA0A5A2 114 aa21.67■■□□□ 1.06
HIF3A-207ENST00000475432 RASEFQ8IZ41 740 aa21.67■■□□□ 1.06
HIF3A-207ENST00000475432 SNX14Q9Y5W7 946 aa21.67■■□□□ 1.06
HIF3A-207ENST00000475432 R3HDM1Q15032 1099 aaKnown RBP21.66■■□□□ 1.06
HIF3A-207ENST00000475432 ABCF2Q9UG63 623 aa21.66■■□□□ 1.06
HIF3A-207ENST00000475432 C6orf229H3BNL8 230 aa21.65■■□□□ 1.06
HIF3A-207ENST00000475432 VPS53Q5VIR6 699 aa21.65■■□□□ 1.06
HIF3A-207ENST00000475432 MAGEB6Q8N7X4 407 aa21.65■■□□□ 1.06
HIF3A-207ENST00000475432 KCNB2Q92953 911 aa21.65■■□□□ 1.06
HIF3A-207ENST00000475432 CNKSR1Q969H4 720 aa21.65■■□□□ 1.06
HIF3A-207ENST00000475432 TMX4Q9H1E5 349 aaPredicted RBP21.65■■□□□ 1.06
HIF3A-207ENST00000475432 CD2BP2O95400 341 aaKnown RBP21.65■■□□□ 1.06
HIF3A-207ENST00000475432 CREB3L3Q68CJ9 461 aa21.65■■□□□ 1.06
HIF3A-207ENST00000475432 MPNDQ8N594 471 aa21.65■■□□□ 1.06
HIF3A-207ENST00000475432 TDRD7Q8NHU6 1098 aaKnown RBP21.65■■□□□ 1.06
HIF3A-207ENST00000475432 DSCC1Q9BVC3 393 aa21.65■■□□□ 1.06
HIF3A-207ENST00000475432 MTFR1LQ9H019 292 aa21.65■■□□□ 1.06
HIF3A-207ENST00000475432 LTBP1Q14766 1721 aa21.64■■□□□ 1.06
HIF3A-207ENST00000475432 HSPD1P10809 573 aaKnown RBP21.64■■□□□ 1.05
HIF3A-207ENST00000475432 HSCBQ8IWL3 235 aa21.64■■□□□ 1.05
HIF3A-207ENST00000475432 CHAF1AQ13111 956 aaPredicted RBP21.63■■□□□ 1.05
HIF3A-207ENST00000475432 DPP8Q6V1X1 898 aaPredicted RBP21.63■■□□□ 1.05
HIF3A-207ENST00000475432 ATF5Q9Y2D1 282 aaPredicted RBP21.63■■□□□ 1.05
HIF3A-207ENST00000475432 U3KPZ7 1027 aaPredicted RBP21.63■■□□□ 1.05
HIF3A-207ENST00000475432 SLC27A2O14975 620 aa21.63■■□□□ 1.05
HIF3A-207ENST00000475432 GPAA1O43292 621 aa21.63■■□□□ 1.05
HIF3A-207ENST00000475432 ZKSCAN1P17029 563 aaPredicted RBP21.63■■□□□ 1.05
HIF3A-207ENST00000475432 RAI14Q9P0K7 980 aa21.63■■□□□ 1.05
HIF3A-207ENST00000475432 DOCK2Q92608 1830 aa21.62■■□□□ 1.05
HIF3A-207ENST00000475432 RNF20Q5VTR2 975 aa21.62■■□□□ 1.05
HIF3A-207ENST00000475432 CD209Q9NNX6 404 aa21.62■■□□□ 1.05
HIF3A-207ENST00000475432 NEK4P51957 841 aa21.62■■□□□ 1.05
HIF3A-207ENST00000475432 DUOX1Q9NRD9 1551 aa21.61■■□□□ 1.05
HIF3A-207ENST00000475432 ST18O60284 1047 aa21.61■■□□□ 1.05
HIF3A-207ENST00000475432 IL1R1P14778 569 aa21.61■■□□□ 1.05
HIF3A-207ENST00000475432 POLD1P28340 1107 aa21.61■■□□□ 1.05
HIF3A-207ENST00000475432 JAG2Q9Y219 1238 aa21.61■■□□□ 1.05
HIF3A-207ENST00000475432 FOXP2O15409 715 aa21.6■■□□□ 1.05
HIF3A-207ENST00000475432 C7orf43Q8WVR3 580 aa21.6■■□□□ 1.05
HIF3A-207ENST00000475432 UPF3BQ9BZI7 483 aaKnown RBP21.6■■□□□ 1.05
HIF3A-207ENST00000475432 MYO5AQ9Y4I1 1855 aaKnown RBP21.6■■□□□ 1.05
HIF3A-207ENST00000475432 MYH7P12883 1935 aa21.6■■□□□ 1.05
HIF3A-207ENST00000475432 AIDAQ96BJ3 306 aa21.6■■□□□ 1.05
HIF3A-207ENST00000475432 ADCK5Q3MIX3 580 aa21.59■■□□□ 1.05
HIF3A-207ENST00000475432 ERICH6Q7L0X2 663 aa21.59■■□□□ 1.05
HIF3A-207ENST00000475432 WDR66Q8TBY9 1149 aa21.59■■□□□ 1.05
HIF3A-207ENST00000475432 ZNF219Q9P2Y4 722 aaPredicted RBP21.59■■□□□ 1.05
HIF3A-207ENST00000475432 SALL1Q9NSC2 1324 aa21.59■■□□□ 1.05
HIF3A-207ENST00000475432 A0A0G2JLW4 131 aa21.58■■□□□ 1.05
HIF3A-207ENST00000475432 RIMBP2O15034 1052 aa21.58■■□□□ 1.05
HIF3A-207ENST00000475432 CYP7A1P22680 504 aa21.58■■□□□ 1.05
HIF3A-207ENST00000475432 TSGA10IPQ3SY00 556 aa21.58■■□□□ 1.05
HIF3A-207ENST00000475432 ZC3H12CQ9C0D7 883 aaKnown RBP21.58■■□□□ 1.05
HIF3A-207ENST00000475432 TAF6LQ9Y6J9 622 aa21.58■■□□□ 1.05
HIF3A-207ENST00000475432 CYP21A2P08686 494 aa21.58■■□□□ 1.04
HIF3A-207ENST00000475432 DPEP1P16444 411 aa21.58■■□□□ 1.04
HIF3A-207ENST00000475432 PRDX5P30044 214 aa21.58■■□□□ 1.04
HIF3A-207ENST00000475432 ADGRA1Q86SQ6 560 aa21.58■■□□□ 1.04
HIF3A-207ENST00000475432 ZNF384Q8TF68 577 aa21.58■■□□□ 1.04
HIF3A-207ENST00000475432 STRBPQ96SI9 672 aaKnown RBP21.58■■□□□ 1.04
HIF3A-207ENST00000475432 SLX4Q8IY92 1834 aa21.57■■□□□ 1.04
HIF3A-207ENST00000475432 PSDA5PKW4 1024 aaPredicted RBP21.57■■□□□ 1.04
HIF3A-207ENST00000475432 K7ELQ4 463 aaPredicted RBP21.57■■□□□ 1.04
HIF3A-207ENST00000475432 MBD4O95243 580 aa21.57■■□□□ 1.04
HIF3A-207ENST00000475432 KCNA3P22001 575 aa21.57■■□□□ 1.04
HIF3A-207ENST00000475432 ZGPATQ8N5A5 531 aaKnown RBP21.57■■□□□ 1.04
HIF3A-207ENST00000475432 TTLL6Q8N841 843 aa21.57■■□□□ 1.04
HIF3A-207ENST00000475432 NSUN4Q96CB9 384 aaKnown RBP21.57■■□□□ 1.04
HIF3A-207ENST00000475432 JAKMIP1Q96N16 626 aaKnown RBP21.57■■□□□ 1.04
HIF3A-207ENST00000475432 TM6SF1Q9BZW5 370 aa21.57■■□□□ 1.04
HIF3A-207ENST00000475432 COA1Q9GZY4 146 aa21.57■■□□□ 1.04
HIF3A-207ENST00000475432 CASTP20810 708 aaKnown RBP21.56■■□□□ 1.04
HIF3A-207ENST00000475432 MECOMQ03112 1051 aa21.56■■□□□ 1.04
HIF3A-207ENST00000475432 SPTY2D1Q68D10 685 aaPredicted RBP21.56■■□□□ 1.04
HIF3A-207ENST00000475432 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
HIF3A-207ENST00000475432 IL27Q8NEV9 243 aa21.56■■□□□ 1.04
HIF3A-207ENST00000475432 MIGA1Q8NAN2 632 aa21.56■■□□□ 1.04
HIF3A-207ENST00000475432 EYA3Q99504 573 aa21.56■■□□□ 1.04
HIF3A-207ENST00000475432 ARMT1Q9H993 441 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms