RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 KIF1BPQ96EK5 621 aa12.86□□□□□ -0.35
VANGL1-205ENST00000474344 MXD3Q9BW11 206 aa12.86□□□□□ -0.35
VANGL1-205ENST00000474344 TAF1DQ9H5J8 278 aaPredicted RBP12.86□□□□□ -0.35
VANGL1-205ENST00000474344 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
VANGL1-205ENST00000474344 DOCK2Q92608 1830 aa12.85□□□□□ -0.35
VANGL1-205ENST00000474344 SHTN1A0MZ66 631 aa12.85□□□□□ -0.35
VANGL1-205ENST00000474344 ZNF280AP59817 542 aaPredicted RBP12.85□□□□□ -0.35
VANGL1-205ENST00000474344 OS9Q13438 667 aaPredicted RBP12.85□□□□□ -0.35
VANGL1-205ENST00000474344 CNOT7Q9UIV1 285 aaKnown RBP12.85□□□□□ -0.35
VANGL1-205ENST00000474344 DBNLQ9UJU6 430 aaKnown RBP12.85□□□□□ -0.35
VANGL1-205ENST00000474344 IQCA1LA6NCM1 817 aa12.84□□□□□ -0.35
VANGL1-205ENST00000474344 ARID4AP29374 1257 aaPredicted RBP12.84□□□□□ -0.35
VANGL1-205ENST00000474344 NEUROD6Q96NK8 337 aa12.84□□□□□ -0.35
VANGL1-205ENST00000474344 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
VANGL1-205ENST00000474344 HACL1Q9UJ83 578 aa12.84□□□□□ -0.35
VANGL1-205ENST00000474344 IQSEC3Q9UPP2 1182 aaPredicted RBP12.84□□□□□ -0.35
VANGL1-205ENST00000474344 PDS5AQ29RF7 1337 aaKnown RBP12.84□□□□□ -0.35
VANGL1-205ENST00000474344 MYO3BQ8WXR4 1341 aa12.84□□□□□ -0.35
VANGL1-205ENST00000474344 CDK5RAP2Q96SN8 1893 aa12.83□□□□□ -0.36
VANGL1-205ENST00000474344 SEMA3EO15041 775 aa12.83□□□□□ -0.36
VANGL1-205ENST00000474344 IGHDP01880 384 aa12.83□□□□□ -0.36
VANGL1-205ENST00000474344 EPHX2P34913 555 aa12.83□□□□□ -0.36
VANGL1-205ENST00000474344 MMP14P50281 582 aa12.83□□□□□ -0.36
VANGL1-205ENST00000474344 HIRAP54198 1017 aaPredicted RBP12.83□□□□□ -0.36
VANGL1-205ENST00000474344 GRIK5Q16478 980 aa12.83□□□□□ -0.36
VANGL1-205ENST00000474344 VPS37DQ86XT2 251 aa12.83□□□□□ -0.36
VANGL1-205ENST00000474344 ZNF512BQ96KM6 892 aaPredicted RBP12.83□□□□□ -0.36
VANGL1-205ENST00000474344 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.36
VANGL1-205ENST00000474344 IL1RAPL2Q9NP60 686 aa12.83□□□□□ -0.36
VANGL1-205ENST00000474344 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
VANGL1-205ENST00000474344 EGFRP00533 1210 aa12.82□□□□□ -0.36
VANGL1-205ENST00000474344 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
VANGL1-205ENST00000474344 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
VANGL1-205ENST00000474344 RASGRF1Q13972 1273 aa12.82□□□□□ -0.36
VANGL1-205ENST00000474344 SMC5Q8IY18 1101 aa12.82□□□□□ -0.36
VANGL1-205ENST00000474344 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
VANGL1-205ENST00000474344 ZBED3Q96IU2 234 aaPredicted RBP12.82□□□□□ -0.36
VANGL1-205ENST00000474344 LRRCC1Q9C099 1032 aa12.82□□□□□ -0.36
VANGL1-205ENST00000474344 ADARB2Q9NS39 739 aaKnown RBP12.82□□□□□ -0.36
VANGL1-205ENST00000474344 GNL3LQ9NVN8 582 aaKnown RBP12.82□□□□□ -0.36
VANGL1-205ENST00000474344 PGAP2Q9UHJ9 254 aa12.82□□□□□ -0.36
VANGL1-205ENST00000474344 JAG2Q9Y219 1238 aa12.82□□□□□ -0.36
VANGL1-205ENST00000474344 SALL1Q9NSC2 1324 aa12.82□□□□□ -0.36
VANGL1-205ENST00000474344 APBB1O00213 710 aa12.81□□□□□ -0.36
VANGL1-205ENST00000474344 SMARCA5O60264 1052 aaPredicted RBP12.81□□□□□ -0.36
VANGL1-205ENST00000474344 USP17L8P0C7I0 530 aa12.81□□□□□ -0.36
VANGL1-205ENST00000474344 MCAMP43121 646 aa12.81□□□□□ -0.36
VANGL1-205ENST00000474344 SCARF1Q14162 830 aa12.81□□□□□ -0.36
VANGL1-205ENST00000474344 MFSD14BQ5SR56 506 aa12.81□□□□□ -0.36
VANGL1-205ENST00000474344 USP50Q70EL3 339 aaPredicted RBP12.81□□□□□ -0.36
VANGL1-205ENST00000474344 AACSQ86V21 672 aa12.81□□□□□ -0.36
VANGL1-205ENST00000474344 CLASRPQ8N2M8 674 aaKnown RBP12.81□□□□□ -0.36
VANGL1-205ENST00000474344 TRPM4Q8TD43 1214 aa12.81□□□□□ -0.36
VANGL1-205ENST00000474344 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
VANGL1-205ENST00000474344 DENND2AQ9ULE3 1009 aa12.81□□□□□ -0.36
VANGL1-205ENST00000474344 H7C1D1 291 aa12.8□□□□□ -0.36
VANGL1-205ENST00000474344 TOMM70O94826 608 aa12.8□□□□□ -0.36
VANGL1-205ENST00000474344 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
VANGL1-205ENST00000474344 LMOD1P29536 600 aaPredicted RBP12.8□□□□□ -0.36
VANGL1-205ENST00000474344 CHAF1AQ13111 956 aaPredicted RBP12.8□□□□□ -0.36
VANGL1-205ENST00000474344 SAMD7Q7Z3H4 446 aa12.8□□□□□ -0.36
VANGL1-205ENST00000474344 PNMA8AQ86V59 439 aaPredicted RBP12.8□□□□□ -0.36
VANGL1-205ENST00000474344 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
VANGL1-205ENST00000474344 RBM46Q8TBY0 533 aaKnown RBP12.8□□□□□ -0.36
VANGL1-205ENST00000474344 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
VANGL1-205ENST00000474344 TBC1D22AQ8WUA7 517 aa12.8□□□□□ -0.36
VANGL1-205ENST00000474344 GCC1Q96CN9 775 aa12.8□□□□□ -0.36
VANGL1-205ENST00000474344 MRIQ9BWK5 157 aa12.8□□□□□ -0.36
VANGL1-205ENST00000474344 SUGT1Q9Y2Z0 365 aa12.8□□□□□ -0.36
VANGL1-205ENST00000474344 UQCRFS1P1P0C7P4 283 aa12.79□□□□□ -0.36
VANGL1-205ENST00000474344 PI16Q6UXB8 463 aa12.79□□□□□ -0.36
VANGL1-205ENST00000474344 KIAA0825Q8IV33 1275 aa12.79□□□□□ -0.36
VANGL1-205ENST00000474344 FBXW7Q969H0 707 aa12.79□□□□□ -0.36
VANGL1-205ENST00000474344 RWDD1Q9H446 243 aaPredicted RBP12.79□□□□□ -0.36
VANGL1-205ENST00000474344 AK9Q5TCS8 1911 aa12.79□□□□□ -0.36
VANGL1-205ENST00000474344 SALL3Q9BXA9 1300 aa12.79□□□□□ -0.36
VANGL1-205ENST00000474344 MAST2Q6P0Q8 1798 aa12.79□□□□□ -0.36
VANGL1-205ENST00000474344 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
VANGL1-205ENST00000474344 FRAT2O75474 233 aaPredicted RBP12.78□□□□□ -0.36
VANGL1-205ENST00000474344 HDLBPQ00341 1268 aaKnown RBP12.78□□□□□ -0.36
VANGL1-205ENST00000474344 TBC1D10BQ4KMP7 808 aaPredicted RBP12.78□□□□□ -0.36
VANGL1-205ENST00000474344 CCDC158Q5M9N0 1113 aa12.78□□□□□ -0.36
VANGL1-205ENST00000474344 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
VANGL1-205ENST00000474344 LDHDQ86WU2 507 aa12.78□□□□□ -0.36
VANGL1-205ENST00000474344 SPATA5Q8NB90 893 aa12.78□□□□□ -0.36
VANGL1-205ENST00000474344 ZNF384Q8TF68 577 aa12.78□□□□□ -0.36
VANGL1-205ENST00000474344 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
VANGL1-205ENST00000474344 MYOZ2Q9NPC6 264 aa12.78□□□□□ -0.36
VANGL1-205ENST00000474344 PCNTO95613 3336 aa12.78□□□□□ -0.36
VANGL1-205ENST00000474344 CYP2E1P05181 493 aaPredicted RBP12.77□□□□□ -0.37
VANGL1-205ENST00000474344 KIF4BQ2VIQ3 1234 aa12.77□□□□□ -0.37
VANGL1-205ENST00000474344 TTC39AQ5SRH9 613 aa12.77□□□□□ -0.37
VANGL1-205ENST00000474344 C16orf71Q8IYS4 520 aaPredicted RBP12.77□□□□□ -0.37
VANGL1-205ENST00000474344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.77□□□□□ -0.37
VANGL1-205ENST00000474344 SERPINA10Q9UK55 444 aa12.77□□□□□ -0.37
VANGL1-205ENST00000474344 TTF2Q9UNY4 1162 aaKnown RBP12.77□□□□□ -0.37
VANGL1-205ENST00000474344 PCDHAC2Q9Y5I4 1007 aa12.77□□□□□ -0.37
VANGL1-205ENST00000474344 AOX1Q06278 1338 aa12.77□□□□□ -0.37
VANGL1-205ENST00000474344 WNT10BO00744 389 aa12.76□□□□□ -0.37
VANGL1-205ENST00000474344 ITGBL1O95965 494 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms