RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 RABL6Q3YEC7 729 aaPredicted RBP22.63■■□□□ 1.21
SNX4-204ENST00000473417 INTS3Q68E01 1043 aaKnown RBP22.63■■□□□ 1.21
SNX4-204ENST00000473417 WNT10BO00744 389 aa22.62■■□□□ 1.21
SNX4-204ENST00000473417 IL1R1P14778 569 aa22.62■■□□□ 1.21
SNX4-204ENST00000473417 NOGQ13253 232 aa22.62■■□□□ 1.21
SNX4-204ENST00000473417 RGMBQ6NW40 437 aa22.62■■□□□ 1.21
SNX4-204ENST00000473417 ZNF804AQ7Z570 1209 aa22.62■■□□□ 1.21
SNX4-204ENST00000473417 BICC1Q9H694 974 aaKnown RBP22.62■■□□□ 1.21
SNX4-204ENST00000473417 KIAA0825Q8IV33 1275 aa22.61■■□□□ 1.21
SNX4-204ENST00000473417 FAM155AB1AL88 458 aaPredicted RBP22.6■■□□□ 1.21
SNX4-204ENST00000473417 CA12O43570 354 aa22.6■■□□□ 1.21
SNX4-204ENST00000473417 SASH1O94885 1247 aa22.6■■□□□ 1.21
SNX4-204ENST00000473417 CERS5Q8N5B7 392 aa22.6■■□□□ 1.21
SNX4-204ENST00000473417 ANKRD44Q8N8A2 993 aa22.6■■□□□ 1.21
SNX4-204ENST00000473417 HDAC9Q9UKV0 1011 aa22.6■■□□□ 1.21
SNX4-204ENST00000473417 CASP8AP2Q9UKL3 1982 aa22.59■■□□□ 1.21
SNX4-204ENST00000473417 PLIN1O60240 522 aa22.59■■□□□ 1.21
SNX4-204ENST00000473417 UBTFL1P0CB47 393 aaPredicted RBP22.59■■□□□ 1.21
SNX4-204ENST00000473417 FTSJ3Q8IY81 847 aaKnown RBP22.59■■□□□ 1.21
SNX4-204ENST00000473417 TMEM57Q8N5G2 664 aa22.59■■□□□ 1.21
SNX4-204ENST00000473417 ZBED3Q96IU2 234 aaPredicted RBP22.59■■□□□ 1.21
SNX4-204ENST00000473417 MEIS3Q99687 375 aa22.59■■□□□ 1.21
SNX4-204ENST00000473417 PUS3Q9BZE2 481 aaKnown RBP22.59■■□□□ 1.21
SNX4-204ENST00000473417 SCAF8Q9UPN6 1271 aaKnown RBP22.59■■□□□ 1.21
SNX4-204ENST00000473417 FKBP1AP62942 108 aaKnown RBP22.58■■□□□ 1.21
SNX4-204ENST00000473417 FKBP1BP68106 108 aa22.58■■□□□ 1.21
SNX4-204ENST00000473417 UBE4AQ14139 1066 aa22.58■■□□□ 1.21
SNX4-204ENST00000473417 DZIP1LQ8IYY4 767 aaKnown RBP22.58■■□□□ 1.21
SNX4-204ENST00000473417 ZIC5Q96T25 663 aa22.58■■□□□ 1.21
SNX4-204ENST00000473417 RIPOR2Q9Y4F9 1068 aa22.58■■□□□ 1.21
SNX4-204ENST00000473417 COL1A1P02452 1464 aaPredicted RBP22.58■■□□□ 1.2
SNX4-204ENST00000473417 CCDC102AQ96A19 550 aa22.57■■□□□ 1.2
SNX4-204ENST00000473417 LAMB1P07942 1786 aa22.57■■□□□ 1.2
SNX4-204ENST00000473417 MROH5Q6ZUA9 1318 aa22.57■■□□□ 1.2
SNX4-204ENST00000473417 SLC10A3P09131 477 aa22.56■■□□□ 1.2
SNX4-204ENST00000473417 RLBP1P12271 317 aa22.56■■□□□ 1.2
SNX4-204ENST00000473417 ZNF157P51786 506 aaPredicted RBP22.56■■□□□ 1.2
SNX4-204ENST00000473417 APOBEC3FQ8IUX4 373 aaKnown RBP22.55■■□□□ 1.2
SNX4-204ENST00000473417 MTMR14Q8NCE2 650 aa22.55■■□□□ 1.2
SNX4-204ENST00000473417 TSKSQ9UJT2 592 aa22.55■■□□□ 1.2
SNX4-204ENST00000473417 FAM205AQ6ZU69 1335 aa22.55■■□□□ 1.2
SNX4-204ENST00000473417 PANK1Q8TE04 598 aa22.54■■□□□ 1.2
SNX4-204ENST00000473417 LRRFIP2Q9Y608 721 aaKnown RBP22.54■■□□□ 1.2
SNX4-204ENST00000473417 GNAI3P08754 354 aa22.53■■□□□ 1.2
SNX4-204ENST00000473417 GYG1P46976 350 aa22.53■■□□□ 1.2
SNX4-204ENST00000473417 LRRC24Q50LG9 513 aa22.53■■□□□ 1.2
SNX4-204ENST00000473417 PRAMEF18Q5VWM3 479 aa22.53■■□□□ 1.2
SNX4-204ENST00000473417 RASAL3Q86YV0 1011 aa22.53■■□□□ 1.2
SNX4-204ENST00000473417 ITPRIPQ8IWB1 547 aa22.53■■□□□ 1.2
SNX4-204ENST00000473417 VGLL2Q8N8G2 317 aa22.53■■□□□ 1.2
SNX4-204ENST00000473417 TDRD7Q8NHU6 1098 aaKnown RBP22.53■■□□□ 1.2
SNX4-204ENST00000473417 HDAC5Q9UQL6 1122 aa22.53■■□□□ 1.2
SNX4-204ENST00000473417 JAG2Q9Y219 1238 aa22.53■■□□□ 1.2
SNX4-204ENST00000473417 HIBADHP31937 336 aaKnown RBP22.52■■□□□ 1.2
SNX4-204ENST00000473417 KIF23Q02241 960 aaPredicted RBP22.52■■□□□ 1.2
SNX4-204ENST00000473417 DLGAP5Q15398 846 aa22.52■■□□□ 1.2
SNX4-204ENST00000473417 FAM84BQ96KN1 310 aaPredicted RBP22.52■■□□□ 1.2
SNX4-204ENST00000473417 MOB2Q70IA6 237 aa22.51■■□□□ 1.19
SNX4-204ENST00000473417 KLHDC4Q8TBB5 520 aa22.51■■□□□ 1.19
SNX4-204ENST00000473417 OTOFQ9HC10 1997 aa22.5■■□□□ 1.19
SNX4-204ENST00000473417 F8W031 263 aaPredicted RBP22.5■■□□□ 1.19
SNX4-204ENST00000473417 NF2P35240 595 aa22.5■■□□□ 1.19
SNX4-204ENST00000473417 METTL24Q5JXM2 366 aa22.5■■□□□ 1.19
SNX4-204ENST00000473417 ABHD8Q96I13 439 aa22.5■■□□□ 1.19
SNX4-204ENST00000473417 PCDHAC2Q9Y5I4 1007 aa22.5■■□□□ 1.19
SNX4-204ENST00000473417 SPDYE2BA6NHP3 402 aa22.49■■□□□ 1.19
SNX4-204ENST00000473417 PDE8BO95263 885 aa22.49■■□□□ 1.19
SNX4-204ENST00000473417 SPDYE6P0CI01 402 aa22.49■■□□□ 1.19
SNX4-204ENST00000473417 MS4A1P11836 297 aa22.49■■□□□ 1.19
SNX4-204ENST00000473417 RFX5P48382 616 aaPredicted RBP22.49■■□□□ 1.19
SNX4-204ENST00000473417 CFAP100Q494V2 611 aa22.49■■□□□ 1.19
SNX4-204ENST00000473417 SAGE1Q9NXZ1 904 aa22.49■■□□□ 1.19
SNX4-204ENST00000473417 SSC5DA1L4H1 1573 aa22.49■■□□□ 1.19
SNX4-204ENST00000473417 UBE2Q2LH0YL09 131 aa22.48■■□□□ 1.19
SNX4-204ENST00000473417 MFSD14BQ5SR56 506 aa22.48■■□□□ 1.19
SNX4-204ENST00000473417 GNAI2P04899 355 aa22.47■■□□□ 1.19
SNX4-204ENST00000473417 FBXO33Q7Z6M2 555 aa22.47■■□□□ 1.19
SNX4-204ENST00000473417 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.47■■□□□ 1.19
SNX4-204ENST00000473417 AOX1Q06278 1338 aa22.47■■□□□ 1.19
SNX4-204ENST00000473417 ZBTB7BO15156 539 aaPredicted RBP22.46■■□□□ 1.19
SNX4-204ENST00000473417 MYO1BO43795 1136 aa22.46■■□□□ 1.19
SNX4-204ENST00000473417 PTPN12Q05209 780 aaKnown RBP22.46■■□□□ 1.19
SNX4-204ENST00000473417 TTLL12Q14166 644 aaPredicted RBP22.46■■□□□ 1.19
SNX4-204ENST00000473417 PRMT6Q96LA8 375 aaPredicted RBP22.46■■□□□ 1.19
SNX4-204ENST00000473417 CSRNP1Q96S65 589 aa22.46■■□□□ 1.19
SNX4-204ENST00000473417 DEFB129Q9H1M3 183 aa22.46■■□□□ 1.19
SNX4-204ENST00000473417 PPP2R3BQ9Y5P8 575 aa22.46■■□□□ 1.19
SNX4-204ENST00000473417 EYA2O00167 538 aa22.45■■□□□ 1.18
SNX4-204ENST00000473417 FGFR2P21802 821 aa22.45■■□□□ 1.18
SNX4-204ENST00000473417 CAVIN4Q5BKX8 364 aa22.45■■□□□ 1.18
SNX4-204ENST00000473417 REM2Q8IYK8 340 aaPredicted RBP22.45■■□□□ 1.18
SNX4-204ENST00000473417 COG6Q9Y2V7 657 aa22.45■■□□□ 1.18
SNX4-204ENST00000473417 CLRN2A0PK11 232 aa22.44■■□□□ 1.18
SNX4-204ENST00000473417 PUM3Q15397 648 aaKnown RBP22.44■■□□□ 1.18
SNX4-204ENST00000473417 C20orf194Q5TEA3 1177 aa22.44■■□□□ 1.18
SNX4-204ENST00000473417 VPS37DQ86XT2 251 aa22.44■■□□□ 1.18
SNX4-204ENST00000473417 C1orf115Q9H7X2 142 aa22.44■■□□□ 1.18
SNX4-204ENST00000473417 SERPINA10Q9UK55 444 aa22.44■■□□□ 1.18
SNX4-204ENST00000473417 TTF2Q9UNY4 1162 aaKnown RBP22.44■■□□□ 1.18
SNX4-204ENST00000473417 IQSEC3Q9UPP2 1182 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms