RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 LATS2Q9NRM7 1088 aa5.68□□□□□ -1.5
CLCC1-208ENST00000473062 WWC3Q9ULE0 1092 aa5.68□□□□□ -1.5
CLCC1-208ENST00000473062 E9PSI1 815 aa5.67□□□□□ -1.5
CLCC1-208ENST00000473062 IRS1P35568 1242 aa5.67□□□□□ -1.5
CLCC1-208ENST00000473062 ST13P50502 369 aaKnown RBP5.67□□□□□ -1.5
CLCC1-208ENST00000473062 TRIM28Q13263 835 aaKnown RBP5.67□□□□□ -1.5
CLCC1-208ENST00000473062 TRAPPC3LQ5T215 181 aa5.67□□□□□ -1.5
CLCC1-208ENST00000473062 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
CLCC1-208ENST00000473062 NXPE4Q6UWF7 544 aa5.67□□□□□ -1.5
CLCC1-208ENST00000473062 C1orf229Q6ZS94 237 aaPredicted RBP5.67□□□□□ -1.5
CLCC1-208ENST00000473062 FOXD4L4Q8WXT5 416 aaPredicted RBP5.67□□□□□ -1.5
CLCC1-208ENST00000473062 TCF12Q99081 682 aa5.67□□□□□ -1.5
CLCC1-208ENST00000473062 POP1Q99575 1024 aaKnown RBP5.67□□□□□ -1.5
CLCC1-208ENST00000473062 LACRTQ9GZZ8 138 aa5.67□□□□□ -1.5
CLCC1-208ENST00000473062 ABCB6Q9NP58 842 aa5.67□□□□□ -1.5
CLCC1-208ENST00000473062 OSGEPQ9NPF4 335 aa5.67□□□□□ -1.5
CLCC1-208ENST00000473062 TRIM33Q9UPN9 1127 aa5.67□□□□□ -1.5
CLCC1-208ENST00000473062 NFKBIEO00221 500 aa5.66□□□□□ -1.5
CLCC1-208ENST00000473062 USP17L7P0C7H9 530 aa5.66□□□□□ -1.5
CLCC1-208ENST00000473062 FCGRTP55899 365 aa5.66□□□□□ -1.5
CLCC1-208ENST00000473062 AP3B2Q13367 1082 aa5.66□□□□□ -1.5
CLCC1-208ENST00000473062 PWP1Q13610 501 aa5.66□□□□□ -1.5
CLCC1-208ENST00000473062 WHAMMQ8TF30 809 aa5.66□□□□□ -1.5
CLCC1-208ENST00000473062 SEC31BQ9NQW1 1179 aa5.66□□□□□ -1.5
CLCC1-208ENST00000473062 SOX13Q9UN79 622 aa5.66□□□□□ -1.5
CLCC1-208ENST00000473062 CYP11A1P05108 521 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 SPATA31C1P0DKV0 1188 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 NID1P14543 1247 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 LMNB1P20700 586 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 RBM25P49756 843 aaKnown RBP5.65□□□□□ -1.5
CLCC1-208ENST00000473062 PCDH1Q08174 1060 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 C19orf57Q0VDD7 668 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 SV2BQ7L1I2 683 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 KRTAP17-1Q9BYP8 105 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 ZNF576Q9H609 170 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 METTL5Q9NRN9 209 aaKnown RBP5.65□□□□□ -1.5
CLCC1-208ENST00000473062 TTF2Q9UNY4 1162 aaKnown RBP5.65□□□□□ -1.5
CLCC1-208ENST00000473062 ADAMTS8Q9UP79 889 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 AKAP2Q9Y2D5 859 aa5.65□□□□□ -1.5
CLCC1-208ENST00000473062 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
CLCC1-208ENST00000473062 B3GALT4O96024 378 aa5.64□□□□□ -1.51
CLCC1-208ENST00000473062 ELNP15502 786 aa5.64□□□□□ -1.51
CLCC1-208ENST00000473062 MRPL58Q14197 206 aaKnown RBP5.64□□□□□ -1.51
CLCC1-208ENST00000473062 TAF1CQ15572 869 aaPredicted RBP5.64□□□□□ -1.51
CLCC1-208ENST00000473062 XP32Q5T750 250 aa5.64□□□□□ -1.51
CLCC1-208ENST00000473062 SCARA3Q6AZY7 606 aa5.64□□□□□ -1.51
CLCC1-208ENST00000473062 PI16Q6UXB8 463 aa5.64□□□□□ -1.51
CLCC1-208ENST00000473062 GLIS3Q8NEA6 775 aa5.64□□□□□ -1.51
CLCC1-208ENST00000473062 MRRFQ96E11 262 aaKnown RBP5.64□□□□□ -1.51
CLCC1-208ENST00000473062 NOC4LQ9BVI4 516 aaKnown RBP5.64□□□□□ -1.51
CLCC1-208ENST00000473062 EMILIN2Q9BXX0 1053 aa5.64□□□□□ -1.51
CLCC1-208ENST00000473062 OSBPL7Q9BZF2 842 aa5.64□□□□□ -1.51
CLCC1-208ENST00000473062 TMEM39AQ9NV64 488 aa5.64□□□□□ -1.51
CLCC1-208ENST00000473062 GPN3Q9UHW5 284 aaPredicted RBP5.64□□□□□ -1.51
CLCC1-208ENST00000473062 SCAMP3O14828 347 aaKnown RBP5.63□□□□□ -1.51
CLCC1-208ENST00000473062 FSCN2O14926 492 aa5.63□□□□□ -1.51
CLCC1-208ENST00000473062 APBA3O96018 575 aa5.63□□□□□ -1.51
CLCC1-208ENST00000473062 ACPPP15309 386 aa5.63□□□□□ -1.51
CLCC1-208ENST00000473062 GRIA4P48058 902 aa5.63□□□□□ -1.51
CLCC1-208ENST00000473062 NRG1Q02297 640 aaPredicted RBP5.63□□□□□ -1.51
CLCC1-208ENST00000473062 LRRC14Q15048 493 aa5.63□□□□□ -1.51
CLCC1-208ENST00000473062 CCDC85BQ15834 202 aaPredicted RBP5.63□□□□□ -1.51
CLCC1-208ENST00000473062 GRIK5Q16478 980 aa5.63□□□□□ -1.51
CLCC1-208ENST00000473062 DMRTC2Q8IXT2 367 aaPredicted RBP5.63□□□□□ -1.51
CLCC1-208ENST00000473062 SETDB2Q96T68 719 aa5.63□□□□□ -1.51
CLCC1-208ENST00000473062 PLVAPQ9BX97 442 aa5.63□□□□□ -1.51
CLCC1-208ENST00000473062 A0A0A0MRY4 1105 aa5.62□□□□□ -1.51
CLCC1-208ENST00000473062 ESRRAP11474 423 aaPredicted RBP5.62□□□□□ -1.51
CLCC1-208ENST00000473062 EPHA1P21709 976 aa5.62□□□□□ -1.51
CLCC1-208ENST00000473062 LINC00114Q6XXX2 140 aa5.62□□□□□ -1.51
CLCC1-208ENST00000473062 HS2ST1Q7LGA3 356 aa5.62□□□□□ -1.51
CLCC1-208ENST00000473062 VN1R5Q7Z5H4 357 aa5.62□□□□□ -1.51
CLCC1-208ENST00000473062 FBXO11Q86XK2 927 aa5.62□□□□□ -1.51
CLCC1-208ENST00000473062 FMR1NBQ8N0W7 255 aaPredicted RBP5.62□□□□□ -1.51
CLCC1-208ENST00000473062 C3orf58Q8NDZ4 430 aa5.62□□□□□ -1.51
CLCC1-208ENST00000473062 HHIPQ96QV1 700 aa5.62□□□□□ -1.51
CLCC1-208ENST00000473062 MRPL18Q9H0U6 180 aaKnown RBP5.62□□□□□ -1.51
CLCC1-208ENST00000473062 LINC01387J3KSC0 135 aa5.61□□□□□ -1.51
CLCC1-208ENST00000473062 TRPA1O75762 1119 aa5.61□□□□□ -1.51
CLCC1-208ENST00000473062 CD68P34810 354 aaPredicted RBP5.61□□□□□ -1.51
CLCC1-208ENST00000473062 BAG6P46379 1132 aa5.61□□□□□ -1.51
CLCC1-208ENST00000473062 SPRED3Q2MJR0 410 aa5.61□□□□□ -1.51
CLCC1-208ENST00000473062 TSNAXIP1Q2TAA8 658 aa5.61□□□□□ -1.51
CLCC1-208ENST00000473062 IGF2-ASQ6U949 168 aa5.61□□□□□ -1.51
CLCC1-208ENST00000473062 TMEM87AQ8NBN3 555 aa5.61□□□□□ -1.51
CLCC1-208ENST00000473062 SLC7A3Q8WY07 619 aa5.61□□□□□ -1.51
CLCC1-208ENST00000473062 CORO1BQ9BR76 489 aa5.61□□□□□ -1.51
CLCC1-208ENST00000473062 USP31Q70CQ4 1352 aa5.6□□□□□ -1.51
CLCC1-208ENST00000473062 METTL12A8MUP2 240 aa5.6□□□□□ -1.51
CLCC1-208ENST00000473062 C9orf172C9J069 976 aa5.6□□□□□ -1.51
CLCC1-208ENST00000473062 ZNF76P36508 570 aa5.6□□□□□ -1.51
CLCC1-208ENST00000473062 RANGAP1P46060 587 aaPredicted RBP5.6□□□□□ -1.51
CLCC1-208ENST00000473062 RPS26P62854 115 aaKnown RBP5.6□□□□□ -1.51
CLCC1-208ENST00000473062 SNRPNP63162 240 aaKnown RBP5.6□□□□□ -1.51
CLCC1-208ENST00000473062 GSTM4Q03013 218 aa5.6□□□□□ -1.51
CLCC1-208ENST00000473062 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
CLCC1-208ENST00000473062 C8orf86Q6ZUL3 223 aa5.6□□□□□ -1.51
CLCC1-208ENST00000473062 NPM2Q86SE8 214 aaKnown RBP5.6□□□□□ -1.51
CLCC1-208ENST00000473062 TRIM11Q96F44 468 aa5.6□□□□□ -1.51
CLCC1-208ENST00000473062 FAM161BQ96MY7 647 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms