RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 MXD3Q9BW11 206 aa18.22■□□□□ 0.51
COMMD3-206ENST00000468179 LRRFIP2Q9Y608 721 aaKnown RBP18.22■□□□□ 0.51
COMMD3-206ENST00000468179 CIAO1O76071 339 aa18.21■□□□□ 0.51
COMMD3-206ENST00000468179 RFX5P48382 616 aaPredicted RBP18.21■□□□□ 0.51
COMMD3-206ENST00000468179 PTPN12Q05209 780 aaKnown RBP18.21■□□□□ 0.51
COMMD3-206ENST00000468179 PUM3Q15397 648 aaKnown RBP18.21■□□□□ 0.51
COMMD3-206ENST00000468179 ANGEL2Q5VTE6 544 aaKnown RBP18.21■□□□□ 0.51
COMMD3-206ENST00000468179 PAXIP1Q6ZW49 1069 aaPredicted RBP18.21■□□□□ 0.51
COMMD3-206ENST00000468179 TDRD7Q8NHU6 1098 aaKnown RBP18.21■□□□□ 0.51
COMMD3-206ENST00000468179 KLHDC4Q8TBB5 520 aa18.21■□□□□ 0.51
COMMD3-206ENST00000468179 FAM84BQ96KN1 310 aaPredicted RBP18.21■□□□□ 0.51
COMMD3-206ENST00000468179 MEIS3Q99687 375 aa18.21■□□□□ 0.51
COMMD3-206ENST00000468179 PSME4Q14997 1843 aa18.2■□□□□ 0.5
COMMD3-206ENST00000468179 FRAT2O75474 233 aaPredicted RBP18.2■□□□□ 0.5
COMMD3-206ENST00000468179 GYG1P46976 350 aa18.2■□□□□ 0.5
COMMD3-206ENST00000468179 SAPCD2Q86UD0 394 aa18.2■□□□□ 0.5
COMMD3-206ENST00000468179 VGLL2Q8N8G2 317 aa18.2■□□□□ 0.5
COMMD3-206ENST00000468179 C2orf69Q8N8R5 385 aa18.2■□□□□ 0.5
COMMD3-206ENST00000468179 FAM205AQ6ZU69 1335 aa18.2■□□□□ 0.5
COMMD3-206ENST00000468179 CEP350Q5VT06 3117 aa18.19■□□□□ 0.5
COMMD3-206ENST00000468179 GNAI2P04899 355 aa18.19■□□□□ 0.5
COMMD3-206ENST00000468179 DLGAP5Q15398 846 aa18.19■□□□□ 0.5
COMMD3-206ENST00000468179 FBXO33Q7Z6M2 555 aa18.19■□□□□ 0.5
COMMD3-206ENST00000468179 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
COMMD3-206ENST00000468179 CLUAP1Q96AJ1 413 aa18.19■□□□□ 0.5
COMMD3-206ENST00000468179 CEP126Q9P2H0 1117 aa18.19■□□□□ 0.5
COMMD3-206ENST00000468179 WDR33Q9C0J8 1336 aaKnown RBP18.19■□□□□ 0.5
COMMD3-206ENST00000468179 ADM5C9JUS6 153 aa18.18■□□□□ 0.5
COMMD3-206ENST00000468179 WNT10BO00744 389 aa18.18■□□□□ 0.5
COMMD3-206ENST00000468179 SLC5A1P13866 664 aa18.18■□□□□ 0.5
COMMD3-206ENST00000468179 IL15P40933 162 aaPredicted RBP18.18■□□□□ 0.5
COMMD3-206ENST00000468179 TBC1D22AQ8WUA7 517 aa18.18■□□□□ 0.5
COMMD3-206ENST00000468179 LPIN2Q92539 896 aa18.18■□□□□ 0.5
COMMD3-206ENST00000468179 AIDAQ96BJ3 306 aa18.18■□□□□ 0.5
COMMD3-206ENST00000468179 CAPNS2Q96L46 248 aa18.18■□□□□ 0.5
COMMD3-206ENST00000468179 GBA2Q9HCG7 927 aaPredicted RBP18.18■□□□□ 0.5
COMMD3-206ENST00000468179 MYO1BO43795 1136 aa18.17■□□□□ 0.5
COMMD3-206ENST00000468179 HSPA1AP0DMV8 641 aaKnown RBP18.17■□□□□ 0.5
COMMD3-206ENST00000468179 HSPA1BP0DMV9 641 aaKnown RBP18.17■□□□□ 0.5
COMMD3-206ENST00000468179 MAP2K1Q02750 393 aaPredicted RBP18.17■□□□□ 0.5
COMMD3-206ENST00000468179 NBPF9Q3BBW0 867 aa18.17■□□□□ 0.5
COMMD3-206ENST00000468179 MTMR14Q8NCE2 650 aa18.17■□□□□ 0.5
COMMD3-206ENST00000468179 COPRSQ9NQ92 184 aa18.17■□□□□ 0.5
COMMD3-206ENST00000468179 SRGAP3O43295 1099 aa18.16■□□□□ 0.5
COMMD3-206ENST00000468179 ASTN2O75129 1339 aaPredicted RBP18.16■□□□□ 0.5
COMMD3-206ENST00000468179 MS4A1P11836 297 aa18.16■□□□□ 0.5
COMMD3-206ENST00000468179 FGFR2P21802 821 aa18.16■□□□□ 0.5
COMMD3-206ENST00000468179 FKBP1BP68106 108 aa18.16■□□□□ 0.5
COMMD3-206ENST00000468179 MTX1Q13505 466 aa18.16■□□□□ 0.5
COMMD3-206ENST00000468179 MFSD14BQ5SR56 506 aa18.16■□□□□ 0.5
COMMD3-206ENST00000468179 ATG9AQ7Z3C6 839 aa18.16■□□□□ 0.5
COMMD3-206ENST00000468179 APOBEC3FQ8IUX4 373 aaKnown RBP18.16■□□□□ 0.5
COMMD3-206ENST00000468179 DZIP1LQ8IYY4 767 aaKnown RBP18.16■□□□□ 0.5
COMMD3-206ENST00000468179 CERS5Q8N5B7 392 aa18.16■□□□□ 0.5
COMMD3-206ENST00000468179 CDCA5Q96FF9 252 aa18.16■□□□□ 0.5
COMMD3-206ENST00000468179 SIL1Q9H173 461 aa18.16■□□□□ 0.5
COMMD3-206ENST00000468179 TRPM7Q96QT4 1865 aa18.15■□□□□ 0.5
COMMD3-206ENST00000468179 NF2P35240 595 aa18.15■□□□□ 0.5
COMMD3-206ENST00000468179 MAP2K2P36507 400 aa18.15■□□□□ 0.5
COMMD3-206ENST00000468179 HUNKP57058 714 aa18.15■□□□□ 0.5
COMMD3-206ENST00000468179 TMEM57Q8N5G2 664 aa18.15■□□□□ 0.5
COMMD3-206ENST00000468179 GNL3LQ9NVN8 582 aaKnown RBP18.15■□□□□ 0.5
COMMD3-206ENST00000468179 F8W031 263 aaPredicted RBP18.14■□□□□ 0.49
COMMD3-206ENST00000468179 RBM5P52756 815 aaKnown RBP eCLIP18.14■□□□□ 0.49
COMMD3-206ENST00000468179 GRM1Q13255 1194 aa18.14■□□□□ 0.49
COMMD3-206ENST00000468179 CYP4F22Q6NT55 531 aa18.14■□□□□ 0.49
COMMD3-206ENST00000468179 ZBED3Q96IU2 234 aaPredicted RBP18.14■□□□□ 0.49
COMMD3-206ENST00000468179 BEGAINQ9BUH8 593 aa18.14■□□□□ 0.49
COMMD3-206ENST00000468179 A0A1B0GUL6 1792 aa18.13■□□□□ 0.49
COMMD3-206ENST00000468179 BCAMP50895 628 aa18.13■□□□□ 0.49
COMMD3-206ENST00000468179 ATP2B3Q16720 1220 aa18.13■□□□□ 0.49
COMMD3-206ENST00000468179 CFAP100Q494V2 611 aa18.13■□□□□ 0.49
COMMD3-206ENST00000468179 CCDC102AQ96A19 550 aa18.13■□□□□ 0.49
COMMD3-206ENST00000468179 SERPINA10Q9UK55 444 aa18.13■□□□□ 0.49
COMMD3-206ENST00000468179 TTF2Q9UNY4 1162 aaKnown RBP18.13■□□□□ 0.49
COMMD3-206ENST00000468179 JAG2Q9Y219 1238 aa18.13■□□□□ 0.49
COMMD3-206ENST00000468179 AKAP2Q9Y2D5 859 aa18.13■□□□□ 0.49
COMMD3-206ENST00000468179 SUGT1Q9Y2Z0 365 aa18.13■□□□□ 0.49
COMMD3-206ENST00000468179 CHAF1AQ13111 956 aaPredicted RBP18.12■□□□□ 0.49
COMMD3-206ENST00000468179 RGMBQ6NW40 437 aa18.12■□□□□ 0.49
COMMD3-206ENST00000468179 DLK2Q6UY11 383 aa18.12■□□□□ 0.49
COMMD3-206ENST00000468179 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
COMMD3-206ENST00000468179 WBP1LQ9NX94 342 aa18.12■□□□□ 0.49
COMMD3-206ENST00000468179 PA2G4Q9UQ80 394 aaKnown RBP18.12■□□□□ 0.49
COMMD3-206ENST00000468179 TNNQ9UQP3 1299 aa18.12■□□□□ 0.49
COMMD3-206ENST00000468179 SPDYE2BA6NHP3 402 aa18.11■□□□□ 0.49
COMMD3-206ENST00000468179 SPDYE6P0CI01 402 aa18.11■□□□□ 0.49
COMMD3-206ENST00000468179 HDLBPQ00341 1268 aaKnown RBP18.11■□□□□ 0.49
COMMD3-206ENST00000468179 NOGQ13253 232 aa18.11■□□□□ 0.49
COMMD3-206ENST00000468179 WDR66Q8TBY9 1149 aa18.11■□□□□ 0.49
COMMD3-206ENST00000468179 IQSEC3Q9UPP2 1182 aaPredicted RBP18.11■□□□□ 0.49
COMMD3-206ENST00000468179 PPP2R3BQ9Y5P8 575 aa18.11■□□□□ 0.49
COMMD3-206ENST00000468179 MAST3O60307 1309 aa18.1■□□□□ 0.49
COMMD3-206ENST00000468179 CTCFP49711 727 aaPredicted RBP18.1■□□□□ 0.49
COMMD3-206ENST00000468179 G3BP1Q13283 466 aaKnown RBP eCLIP18.1■□□□□ 0.49
COMMD3-206ENST00000468179 SEMA3EO15041 775 aa18.09■□□□□ 0.49
COMMD3-206ENST00000468179 ZNF157P51786 506 aaPredicted RBP18.09■□□□□ 0.49
COMMD3-206ENST00000468179 TNFAIP1Q13829 316 aa18.09■□□□□ 0.49
COMMD3-206ENST00000468179 MRIQ9BWK5 157 aa18.09■□□□□ 0.49
COMMD3-206ENST00000468179 COL1A1P02452 1464 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms