RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 HSPA1AP0DMV8 641 aaKnown RBP14.4□□□□□ -0.1
CDHR3-205ENST00000468143 HSPA1BP0DMV9 641 aaKnown RBP14.4□□□□□ -0.1
CDHR3-205ENST00000468143 BCAMP50895 628 aa14.4□□□□□ -0.1
CDHR3-205ENST00000468143 CAVIN4Q5BKX8 364 aa14.4□□□□□ -0.1
CDHR3-205ENST00000468143 PRAMEF18Q5VWM3 479 aa14.4□□□□□ -0.1
CDHR3-205ENST00000468143 FBXO33Q7Z6M2 555 aa14.4□□□□□ -0.1
CDHR3-205ENST00000468143 PCDHAC2Q9Y5I4 1007 aa14.4□□□□□ -0.1
CDHR3-205ENST00000468143 WDR33Q9C0J8 1336 aaKnown RBP14.4□□□□□ -0.1
CDHR3-205ENST00000468143 CEP350Q5VT06 3117 aa14.39□□□□□ -0.11
CDHR3-205ENST00000468143 SRGAP3O43295 1099 aa14.39□□□□□ -0.11
CDHR3-205ENST00000468143 FRAT2O75474 233 aaPredicted RBP14.39□□□□□ -0.11
CDHR3-205ENST00000468143 FGFR2P21802 821 aa14.39□□□□□ -0.11
CDHR3-205ENST00000468143 CHAF1AQ13111 956 aaPredicted RBP14.39□□□□□ -0.11
CDHR3-205ENST00000468143 PUM3Q15397 648 aaKnown RBP14.39□□□□□ -0.11
CDHR3-205ENST00000468143 SAPCD2Q86UD0 394 aa14.39□□□□□ -0.11
CDHR3-205ENST00000468143 CDCA5Q96FF9 252 aa14.39□□□□□ -0.11
CDHR3-205ENST00000468143 A0A1B0GUL6 1792 aa14.38□□□□□ -0.11
CDHR3-205ENST00000468143 CIAO1O76071 339 aa14.38□□□□□ -0.11
CDHR3-205ENST00000468143 GNAI2P04899 355 aa14.38□□□□□ -0.11
CDHR3-205ENST00000468143 IFIT1P09914 478 aaKnown RBP14.38□□□□□ -0.11
CDHR3-205ENST00000468143 RLBP1P12271 317 aa14.38□□□□□ -0.11
CDHR3-205ENST00000468143 DLGAP5Q15398 846 aa14.38□□□□□ -0.11
CDHR3-205ENST00000468143 MFSD14BQ5SR56 506 aa14.38□□□□□ -0.11
CDHR3-205ENST00000468143 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
CDHR3-205ENST00000468143 DZIP1LQ8IYY4 767 aaKnown RBP14.38□□□□□ -0.11
CDHR3-205ENST00000468143 CAPNS2Q96L46 248 aa14.38□□□□□ -0.11
CDHR3-205ENST00000468143 CEP126Q9P2H0 1117 aa14.38□□□□□ -0.11
CDHR3-205ENST00000468143 FAM205AQ6ZU69 1335 aa14.38□□□□□ -0.11
CDHR3-205ENST00000468143 SLC5A1P13866 664 aa14.37□□□□□ -0.11
CDHR3-205ENST00000468143 RBM5P52756 815 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDHR3-205ENST00000468143 FKBP1AP62942 108 aaKnown RBP14.37□□□□□ -0.11
CDHR3-205ENST00000468143 CFAP100Q494V2 611 aa14.37□□□□□ -0.11
CDHR3-205ENST00000468143 ITPRIPQ8IWB1 547 aa14.37□□□□□ -0.11
CDHR3-205ENST00000468143 C2orf69Q8N8R5 385 aa14.37□□□□□ -0.11
CDHR3-205ENST00000468143 LPIN2Q92539 896 aa14.37□□□□□ -0.11
CDHR3-205ENST00000468143 C1orf115Q9H7X2 142 aa14.37□□□□□ -0.11
CDHR3-205ENST00000468143 GBA2Q9HCG7 927 aaPredicted RBP14.37□□□□□ -0.11
CDHR3-205ENST00000468143 COPRSQ9NQ92 184 aa14.37□□□□□ -0.11
CDHR3-205ENST00000468143 PSME4Q14997 1843 aa14.36□□□□□ -0.11
CDHR3-205ENST00000468143 PNMA6EA0A0J9YXQ4 647 aa14.36□□□□□ -0.11
CDHR3-205ENST00000468143 AOC2O75106 756 aa14.36□□□□□ -0.11
CDHR3-205ENST00000468143 IL15P40933 162 aaPredicted RBP14.36□□□□□ -0.11
CDHR3-205ENST00000468143 HUNKP57058 714 aa14.36□□□□□ -0.11
CDHR3-205ENST00000468143 GRIK5Q16478 980 aa14.36□□□□□ -0.11
CDHR3-205ENST00000468143 ATP2B3Q16720 1220 aa14.36□□□□□ -0.11
CDHR3-205ENST00000468143 ZBED3Q96IU2 234 aaPredicted RBP14.36□□□□□ -0.11
CDHR3-205ENST00000468143 PRMT6Q96LA8 375 aaPredicted RBP14.36□□□□□ -0.11
CDHR3-205ENST00000468143 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
CDHR3-205ENST00000468143 TTF2Q9UNY4 1162 aaKnown RBP14.36□□□□□ -0.11
CDHR3-205ENST00000468143 CLRN2A0PK11 232 aa14.35□□□□□ -0.11
CDHR3-205ENST00000468143 ECE1P42892 770 aa14.35□□□□□ -0.11
CDHR3-205ENST00000468143 MMP14P50281 582 aa14.35□□□□□ -0.11
CDHR3-205ENST00000468143 MTX1Q13505 466 aa14.35□□□□□ -0.11
CDHR3-205ENST00000468143 MOB2Q70IA6 237 aa14.35□□□□□ -0.11
CDHR3-205ENST00000468143 PANK1Q8TE04 598 aa14.35□□□□□ -0.11
CDHR3-205ENST00000468143 ZNF646O15015 1829 aaPredicted RBP14.35□□□□□ -0.11
CDHR3-205ENST00000468143 AOX1Q06278 1338 aa14.35□□□□□ -0.11
CDHR3-205ENST00000468143 PITPNM2Q9BZ72 1349 aa14.35□□□□□ -0.11
CDHR3-205ENST00000468143 ZBTB7BO15156 539 aaPredicted RBP14.34□□□□□ -0.11
CDHR3-205ENST00000468143 TIMM10P62072 90 aa14.34□□□□□ -0.11
CDHR3-205ENST00000468143 TFCP2Q12800 502 aa14.34□□□□□ -0.11
CDHR3-205ENST00000468143 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.34□□□□□ -0.11
CDHR3-205ENST00000468143 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
CDHR3-205ENST00000468143 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
CDHR3-205ENST00000468143 ADORA1P30542 326 aa14.33□□□□□ -0.12
CDHR3-205ENST00000468143 PRKG1Q13976 671 aa14.33□□□□□ -0.12
CDHR3-205ENST00000468143 MTMR14Q8NCE2 650 aa14.33□□□□□ -0.12
CDHR3-205ENST00000468143 TRPM7Q96QT4 1865 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 UBE2Q2LH0YL09 131 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 FOXN1O15353 648 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 MYO1BO43795 1136 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 CRKP46108 304 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 ZNF157P51786 506 aaPredicted RBP14.32□□□□□ -0.12
CDHR3-205ENST00000468143 ATP8B2P98198 1209 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 TTLL12Q14166 644 aaPredicted RBP14.32□□□□□ -0.12
CDHR3-205ENST00000468143 COL13A1Q5TAT6 717 aaPredicted RBP14.32□□□□□ -0.12
CDHR3-205ENST00000468143 RGMBQ6NW40 437 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 APOBEC3FQ8IUX4 373 aaKnown RBP14.32□□□□□ -0.12
CDHR3-205ENST00000468143 AIDAQ96BJ3 306 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 HHIPL1Q96JK4 782 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 ZIC5Q96T25 663 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 TDRD3Q9H7E2 651 aaKnown RBP14.32□□□□□ -0.12
CDHR3-205ENST00000468143 VEZTQ9HBM0 779 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 WBP1LQ9NX94 342 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 RCAN3Q9UKA8 241 aa14.32□□□□□ -0.12
CDHR3-205ENST00000468143 PHKA1P46020 1223 aa14.31□□□□□ -0.12
CDHR3-205ENST00000468143 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDHR3-205ENST00000468143 TBC1D22AQ8WUA7 517 aa14.31□□□□□ -0.12
CDHR3-205ENST00000468143 NEUROD6Q96NK8 337 aa14.31□□□□□ -0.12
CDHR3-205ENST00000468143 DEFB129Q9H1M3 183 aa14.31□□□□□ -0.12
CDHR3-205ENST00000468143 SERPINA10Q9UK55 444 aa14.31□□□□□ -0.12
CDHR3-205ENST00000468143 FZD1Q9UP38 647 aa14.31□□□□□ -0.12
CDHR3-205ENST00000468143 POLR2AP24928 1970 aaKnown RBP14.31□□□□□ -0.12
CDHR3-205ENST00000468143 A0A1B0GUL7 405 aa14.3□□□□□ -0.12
CDHR3-205ENST00000468143 MAP2K2P36507 400 aa14.3□□□□□ -0.12
CDHR3-205ENST00000468143 MAP2K1Q02750 393 aaPredicted RBP14.3□□□□□ -0.12
CDHR3-205ENST00000468143 CCDC102BQ68D86 513 aa14.3□□□□□ -0.12
CDHR3-205ENST00000468143 XAGE2Q96GT9 111 aa14.3□□□□□ -0.12
CDHR3-205ENST00000468143 GNL3LQ9NVN8 582 aaKnown RBP14.3□□□□□ -0.12
CDHR3-205ENST00000468143 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms