RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 LRRFIP2Q9Y608 721 aaKnown RBP22.69■■□□□ 1.22
CGREF1-208ENST00000467539 CAPNS2Q96L46 248 aa22.68■■□□□ 1.22
CGREF1-208ENST00000467539 ATG9AQ7Z3C6 839 aa22.67■■□□□ 1.22
CGREF1-208ENST00000467539 C2orf69Q8N8R5 385 aa22.67■■□□□ 1.22
CGREF1-208ENST00000467539 MTMR14Q8NCE2 650 aa22.67■■□□□ 1.22
CGREF1-208ENST00000467539 ZBED3Q96IU2 234 aaPredicted RBP22.67■■□□□ 1.22
CGREF1-208ENST00000467539 FGFR2P21802 821 aa22.66■■□□□ 1.22
CGREF1-208ENST00000467539 CAVIN4Q5BKX8 364 aa22.66■■□□□ 1.22
CGREF1-208ENST00000467539 ZKSCAN2Q63HK3 967 aa22.66■■□□□ 1.22
CGREF1-208ENST00000467539 CYP4F22Q6NT55 531 aa22.66■■□□□ 1.22
CGREF1-208ENST00000467539 GBA2Q9HCG7 927 aaPredicted RBP22.66■■□□□ 1.22
CGREF1-208ENST00000467539 CIAO1O76071 339 aa22.65■■□□□ 1.22
CGREF1-208ENST00000467539 VPS37DQ86XT2 251 aa22.65■■□□□ 1.22
CGREF1-208ENST00000467539 WBP1LQ9NX94 342 aa22.65■■□□□ 1.22
CGREF1-208ENST00000467539 TNNQ9UQP3 1299 aa22.65■■□□□ 1.22
CGREF1-208ENST00000467539 A0A1B0GUL6 1792 aa22.65■■□□□ 1.22
CGREF1-208ENST00000467539 MAP2K2P36507 400 aa22.64■■□□□ 1.21
CGREF1-208ENST00000467539 MAP2K1Q02750 393 aaPredicted RBP22.64■■□□□ 1.21
CGREF1-208ENST00000467539 PUM3Q15397 648 aaKnown RBP22.64■■□□□ 1.21
CGREF1-208ENST00000467539 PAXIP1Q6ZW49 1069 aaPredicted RBP22.64■■□□□ 1.21
CGREF1-208ENST00000467539 CLUAP1Q96AJ1 413 aa22.64■■□□□ 1.21
CGREF1-208ENST00000467539 CDCA5Q96FF9 252 aa22.64■■□□□ 1.21
CGREF1-208ENST00000467539 COPRSQ9NQ92 184 aa22.64■■□□□ 1.21
CGREF1-208ENST00000467539 ZNF646O15015 1829 aaPredicted RBP22.64■■□□□ 1.21
CGREF1-208ENST00000467539 IFIT1P09914 478 aaKnown RBP22.63■■□□□ 1.21
CGREF1-208ENST00000467539 HUNKP57058 714 aa22.63■■□□□ 1.21
CGREF1-208ENST00000467539 DLGAP5Q15398 846 aa22.63■■□□□ 1.21
CGREF1-208ENST00000467539 LPIN2Q92539 896 aa22.63■■□□□ 1.21
CGREF1-208ENST00000467539 CEP126Q9P2H0 1117 aa22.63■■□□□ 1.21
CGREF1-208ENST00000467539 BCAMP50895 628 aa22.62■■□□□ 1.21
CGREF1-208ENST00000467539 MTX1Q13505 466 aa22.62■■□□□ 1.21
CGREF1-208ENST00000467539 JAG2Q9Y219 1238 aa22.62■■□□□ 1.21
CGREF1-208ENST00000467539 F8W031 263 aaPredicted RBP22.61■■□□□ 1.21
CGREF1-208ENST00000467539 GNAI2P04899 355 aa22.61■■□□□ 1.21
CGREF1-208ENST00000467539 IL15P40933 162 aaPredicted RBP22.61■■□□□ 1.21
CGREF1-208ENST00000467539 MFSD14BQ5SR56 506 aa22.61■■□□□ 1.21
CGREF1-208ENST00000467539 SIL1Q9H173 461 aa22.61■■□□□ 1.21
CGREF1-208ENST00000467539 SLC5A1P13866 664 aa22.6■■□□□ 1.21
CGREF1-208ENST00000467539 FKBP1BP68106 108 aa22.6■■□□□ 1.21
CGREF1-208ENST00000467539 GRM1Q13255 1194 aa22.6■■□□□ 1.21
CGREF1-208ENST00000467539 CFAP100Q494V2 611 aa22.6■■□□□ 1.21
CGREF1-208ENST00000467539 TMEM57Q8N5G2 664 aa22.6■■□□□ 1.21
CGREF1-208ENST00000467539 SCAF8Q9UPN6 1271 aaKnown RBP22.6■■□□□ 1.21
CGREF1-208ENST00000467539 PA2G4Q9UQ80 394 aaKnown RBP22.6■■□□□ 1.21
CGREF1-208ENST00000467539 FOXN1O15353 648 aa22.59■■□□□ 1.21
CGREF1-208ENST00000467539 FRAT2O75474 233 aaPredicted RBP22.59■■□□□ 1.21
CGREF1-208ENST00000467539 RGMBQ6NW40 437 aa22.59■■□□□ 1.21
CGREF1-208ENST00000467539 APOBEC3FQ8IUX4 373 aaKnown RBP22.59■■□□□ 1.21
CGREF1-208ENST00000467539 TBC1D22AQ8WUA7 517 aa22.59■■□□□ 1.21
CGREF1-208ENST00000467539 AIDAQ96BJ3 306 aa22.59■■□□□ 1.21
CGREF1-208ENST00000467539 PRMT6Q96LA8 375 aaPredicted RBP22.59■■□□□ 1.21
CGREF1-208ENST00000467539 IQSEC3Q9UPP2 1182 aaPredicted RBP22.59■■□□□ 1.21
CGREF1-208ENST00000467539 SPDYE2BA6NHP3 402 aa22.58■■□□□ 1.21
CGREF1-208ENST00000467539 SRGAP3O43295 1099 aa22.58■■□□□ 1.21
CGREF1-208ENST00000467539 AOC2O75106 756 aa22.58■■□□□ 1.21
CGREF1-208ENST00000467539 SPDYE6P0CI01 402 aa22.58■■□□□ 1.21
CGREF1-208ENST00000467539 COL13A1Q5TAT6 717 aaPredicted RBP22.58■■□□□ 1.21
CGREF1-208ENST00000467539 PRAMEF18Q5VWM3 479 aa22.58■■□□□ 1.21
CGREF1-208ENST00000467539 CCDC102AQ96A19 550 aa22.58■■□□□ 1.21
CGREF1-208ENST00000467539 SERPINA10Q9UK55 444 aa22.58■■□□□ 1.21
CGREF1-208ENST00000467539 DZIP1LQ8IYY4 767 aaKnown RBP22.57■■□□□ 1.2
CGREF1-208ENST00000467539 MRIQ9BWK5 157 aa22.57■■□□□ 1.2
CGREF1-208ENST00000467539 TTF2Q9UNY4 1162 aaKnown RBP22.57■■□□□ 1.2
CGREF1-208ENST00000467539 PCDHAC2Q9Y5I4 1007 aa22.57■■□□□ 1.2
CGREF1-208ENST00000467539 MYO1BO43795 1136 aa22.56■■□□□ 1.2
CGREF1-208ENST00000467539 CTCFP49711 727 aaPredicted RBP22.56■■□□□ 1.2
CGREF1-208ENST00000467539 NOGQ13253 232 aa22.56■■□□□ 1.2
CGREF1-208ENST00000467539 ATP2B3Q16720 1220 aa22.56■■□□□ 1.2
CGREF1-208ENST00000467539 ZNF157P51786 506 aaPredicted RBP22.55■■□□□ 1.2
CGREF1-208ENST00000467539 RBM5P52756 815 aaKnown RBP eCLIP22.55■■□□□ 1.2
CGREF1-208ENST00000467539 HDLBPQ00341 1268 aaKnown RBP22.55■■□□□ 1.2
CGREF1-208ENST00000467539 CHAF1AQ13111 956 aaPredicted RBP22.55■■□□□ 1.2
CGREF1-208ENST00000467539 DEFB129Q9H1M3 183 aa22.55■■□□□ 1.2
CGREF1-208ENST00000467539 FAM155AB1AL88 458 aaPredicted RBP22.54■■□□□ 1.2
CGREF1-208ENST00000467539 ZBTB7BO15156 539 aaPredicted RBP22.54■■□□□ 1.2
CGREF1-208ENST00000467539 ZBTB22O15209 634 aa22.54■■□□□ 1.2
CGREF1-208ENST00000467539 NF2P35240 595 aa22.54■■□□□ 1.2
CGREF1-208ENST00000467539 GRIK5Q16478 980 aa22.54■■□□□ 1.2
CGREF1-208ENST00000467539 FTSJ3Q8IY81 847 aaKnown RBP22.54■■□□□ 1.2
CGREF1-208ENST00000467539 SUGT1Q9Y2Z0 365 aa22.54■■□□□ 1.2
CGREF1-208ENST00000467539 IFFO2Q5TF58 517 aa22.53■■□□□ 1.2
CGREF1-208ENST00000467539 BEGAINQ9BUH8 593 aa22.53■■□□□ 1.2
CGREF1-208ENST00000467539 PRDM10Q9NQV6 1147 aa22.53■■□□□ 1.2
CGREF1-208ENST00000467539 PNMA6EA0A0J9YXQ4 647 aa22.52■■□□□ 1.2
CGREF1-208ENST00000467539 RLBP1P12271 317 aa22.52■■□□□ 1.2
CGREF1-208ENST00000467539 CRKP46108 304 aa22.52■■□□□ 1.2
CGREF1-208ENST00000467539 WDR66Q8TBY9 1149 aa22.52■■□□□ 1.2
CGREF1-208ENST00000467539 GNL3LQ9NVN8 582 aaKnown RBP22.52■■□□□ 1.2
CGREF1-208ENST00000467539 PPP2R3BQ9Y5P8 575 aa22.52■■□□□ 1.2
CGREF1-208ENST00000467539 CLRN2A0PK11 232 aa22.51■■□□□ 1.19
CGREF1-208ENST00000467539 UBE2Q2LH0YL09 131 aa22.51■■□□□ 1.19
CGREF1-208ENST00000467539 TIMM10P62072 90 aa22.51■■□□□ 1.19
CGREF1-208ENST00000467539 ATP8B2P98198 1209 aa22.51■■□□□ 1.19
CGREF1-208ENST00000467539 MOB2Q70IA6 237 aa22.51■■□□□ 1.19
CGREF1-208ENST00000467539 ZIC5Q96T25 663 aa22.51■■□□□ 1.19
CGREF1-208ENST00000467539 AKAP2Q9Y2D5 859 aa22.51■■□□□ 1.19
CGREF1-208ENST00000467539 TFCP2Q12800 502 aa22.5■■□□□ 1.19
CGREF1-208ENST00000467539 ZNF70Q9UC06 446 aaPredicted RBP22.5■■□□□ 1.19
CGREF1-208ENST00000467539 AOX1Q06278 1338 aa22.5■■□□□ 1.19
CGREF1-208ENST00000467539 SEMA3EO15041 775 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms