RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 GNAI3P08754 354 aa15.21■□□□□ 0.03
XRN1-204ENST00000465074 IL1R1P14778 569 aa15.21■□□□□ 0.03
XRN1-204ENST00000465074 FTSJ3Q8IY81 847 aaKnown RBP15.21■□□□□ 0.03
XRN1-204ENST00000465074 RFX5P48382 616 aaPredicted RBP15.2■□□□□ 0.02
XRN1-204ENST00000465074 RBM5P52756 815 aaKnown RBP eCLIP15.2■□□□□ 0.02
XRN1-204ENST00000465074 PTPN12Q05209 780 aaKnown RBP15.2■□□□□ 0.02
XRN1-204ENST00000465074 CHAF1AQ13111 956 aaPredicted RBP15.2■□□□□ 0.02
XRN1-204ENST00000465074 CAVIN4Q5BKX8 364 aa15.2■□□□□ 0.02
XRN1-204ENST00000465074 CYP4F22Q6NT55 531 aa15.2■□□□□ 0.02
XRN1-204ENST00000465074 CERS5Q8N5B7 392 aa15.2■□□□□ 0.02
XRN1-204ENST00000465074 TMEM57Q8N5G2 664 aa15.2■□□□□ 0.02
XRN1-204ENST00000465074 FAM84BQ96KN1 310 aaPredicted RBP15.2■□□□□ 0.02
XRN1-204ENST00000465074 PA2G4Q9UQ80 394 aaKnown RBP15.2■□□□□ 0.02
XRN1-204ENST00000465074 RASSF10A6NK89 507 aa15.19■□□□□ 0.02
XRN1-204ENST00000465074 IFIT1P09914 478 aaKnown RBP15.19■□□□□ 0.02
XRN1-204ENST00000465074 HSPA1AP0DMV8 641 aaKnown RBP15.19■□□□□ 0.02
XRN1-204ENST00000465074 HSPA1BP0DMV9 641 aaKnown RBP15.19■□□□□ 0.02
XRN1-204ENST00000465074 DLGAP5Q15398 846 aa15.19■□□□□ 0.02
XRN1-204ENST00000465074 CAPNS2Q96L46 248 aa15.19■□□□□ 0.02
XRN1-204ENST00000465074 TLL2Q9Y6L7 1015 aa15.19■□□□□ 0.02
XRN1-204ENST00000465074 WDR33Q9C0J8 1336 aaKnown RBP15.18■□□□□ 0.02
XRN1-204ENST00000465074 ZNF609O15014 1411 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 PCNTO95613 3336 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 WNT10BO00744 389 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 SRGAP3O43295 1099 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 GNAI2P04899 355 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 BCAMP50895 628 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 PUM3Q15397 648 aaKnown RBP15.18■□□□□ 0.02
XRN1-204ENST00000465074 PRAMEF18Q5VWM3 479 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 ITPRIPQ8IWB1 547 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 VGLL2Q8N8G2 317 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 C2orf69Q8N8R5 385 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 TDRD7Q8NHU6 1098 aaKnown RBP15.18■□□□□ 0.02
XRN1-204ENST00000465074 CDCA5Q96FF9 252 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 CEP126Q9P2H0 1117 aa15.18■□□□□ 0.02
XRN1-204ENST00000465074 SLC5A1P13866 664 aa15.17■□□□□ 0.02
XRN1-204ENST00000465074 ECE1P42892 770 aa15.17■□□□□ 0.02
XRN1-204ENST00000465074 HUNKP57058 714 aa15.17■□□□□ 0.02
XRN1-204ENST00000465074 MFSD14BQ5SR56 506 aa15.17■□□□□ 0.02
XRN1-204ENST00000465074 ATG9AQ7Z3C6 839 aa15.17■□□□□ 0.02
XRN1-204ENST00000465074 SAPCD2Q86UD0 394 aa15.17■□□□□ 0.02
XRN1-204ENST00000465074 DZIP1LQ8IYY4 767 aaKnown RBP15.17■□□□□ 0.02
XRN1-204ENST00000465074 PCDHAC2Q9Y5I4 1007 aa15.17■□□□□ 0.02
XRN1-204ENST00000465074 TTLL12Q14166 644 aaPredicted RBP15.16■□□□□ 0.02
XRN1-204ENST00000465074 ATP2B3Q16720 1220 aa15.16■□□□□ 0.02
XRN1-204ENST00000465074 CFAP100Q494V2 611 aa15.16■□□□□ 0.02
XRN1-204ENST00000465074 FBXO33Q7Z6M2 555 aa15.16■□□□□ 0.02
XRN1-204ENST00000465074 AIDAQ96BJ3 306 aa15.16■□□□□ 0.02
XRN1-204ENST00000465074 GBA2Q9HCG7 927 aaPredicted RBP15.16■□□□□ 0.02
XRN1-204ENST00000465074 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
XRN1-204ENST00000465074 TTF2Q9UNY4 1162 aaKnown RBP15.16■□□□□ 0.02
XRN1-204ENST00000465074 CLRN2A0PK11 232 aa15.15■□□□□ 0.02
XRN1-204ENST00000465074 AOC2O75106 756 aa15.15■□□□□ 0.02
XRN1-204ENST00000465074 LPIN2Q92539 896 aa15.15■□□□□ 0.02
XRN1-204ENST00000465074 C1orf115Q9H7X2 142 aa15.15■□□□□ 0.02
XRN1-204ENST00000465074 MYH13Q9UKX3 1938 aa15.15■□□□□ 0.02
XRN1-204ENST00000465074 FAM205AQ6ZU69 1335 aa15.15■□□□□ 0.02
XRN1-204ENST00000465074 MYO1BO43795 1136 aa15.14■□□□□ 0.01
XRN1-204ENST00000465074 CIAO1O76071 339 aa15.14■□□□□ 0.01
XRN1-204ENST00000465074 FGFR2P21802 821 aa15.14■□□□□ 0.01
XRN1-204ENST00000465074 IL15P40933 162 aaPredicted RBP15.14■□□□□ 0.01
XRN1-204ENST00000465074 MMP14P50281 582 aa15.14■□□□□ 0.01
XRN1-204ENST00000465074 FKBP1AP62942 108 aaKnown RBP15.14■□□□□ 0.01
XRN1-204ENST00000465074 PRKG1Q13976 671 aa15.14■□□□□ 0.01
XRN1-204ENST00000465074 PANK1Q8TE04 598 aa15.14■□□□□ 0.01
XRN1-204ENST00000465074 VEZTQ9HBM0 779 aa15.14■□□□□ 0.01
XRN1-204ENST00000465074 PITPNM2Q9BZ72 1349 aa15.14■□□□□ 0.01
XRN1-204ENST00000465074 RLBP1P12271 317 aa15.13■□□□□ 0.01
XRN1-204ENST00000465074 APOBEC3FQ8IUX4 373 aaKnown RBP15.13■□□□□ 0.01
XRN1-204ENST00000465074 COPRSQ9NQ92 184 aa15.13■□□□□ 0.01
XRN1-204ENST00000465074 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
XRN1-204ENST00000465074 PNMA6EA0A0J9YXQ4 647 aa15.12■□□□□ 0.01
XRN1-204ENST00000465074 FOXN1O15353 648 aa15.12■□□□□ 0.01
XRN1-204ENST00000465074 NF2P35240 595 aa15.12■□□□□ 0.01
XRN1-204ENST00000465074 ZNF157P51786 506 aaPredicted RBP15.12■□□□□ 0.01
XRN1-204ENST00000465074 TIMM10P62072 90 aa15.12■□□□□ 0.01
XRN1-204ENST00000465074 TFCP2Q12800 502 aa15.12■□□□□ 0.01
XRN1-204ENST00000465074 G3BP1Q13283 466 aaKnown RBP eCLIP15.12■□□□□ 0.01
XRN1-204ENST00000465074 GRIK5Q16478 980 aa15.12■□□□□ 0.01
XRN1-204ENST00000465074 MOB2Q70IA6 237 aa15.12■□□□□ 0.01
XRN1-204ENST00000465074 PRMT6Q96LA8 375 aaPredicted RBP15.12■□□□□ 0.01
XRN1-204ENST00000465074 NEUROD6Q96NK8 337 aa15.12■□□□□ 0.01
XRN1-204ENST00000465074 BEGAINQ9BUH8 593 aa15.12■□□□□ 0.01
XRN1-204ENST00000465074 ECM29Q5VYK3 1845 aa15.11■□□□□ 0.01
XRN1-204ENST00000465074 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
XRN1-204ENST00000465074 UBE2Q2LH0YL09 131 aa15.11■□□□□ 0.01
XRN1-204ENST00000465074 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
XRN1-204ENST00000465074 ADORA1P30542 326 aa15.11■□□□□ 0.01
XRN1-204ENST00000465074 MAP2K1Q02750 393 aaPredicted RBP15.11■□□□□ 0.01
XRN1-204ENST00000465074 OS9Q13438 667 aaPredicted RBP15.11■□□□□ 0.01
XRN1-204ENST00000465074 RGMBQ6NW40 437 aa15.11■□□□□ 0.01
XRN1-204ENST00000465074 TBC1D22AQ8WUA7 517 aa15.11■□□□□ 0.01
XRN1-204ENST00000465074 GNL3LQ9NVN8 582 aaKnown RBP15.11■□□□□ 0.01
XRN1-204ENST00000465074 ARAP2Q8WZ64 1704 aa15.1■□□□□ 0.01
XRN1-204ENST00000465074 MTX1Q13505 466 aa15.1■□□□□ 0.01
XRN1-204ENST00000465074 GORABQ5T7V8 394 aa15.1■□□□□ 0.01
XRN1-204ENST00000465074 COL13A1Q5TAT6 717 aaPredicted RBP15.1■□□□□ 0.01
XRN1-204ENST00000465074 ZBED3Q96IU2 234 aaPredicted RBP15.1■□□□□ 0.01
XRN1-204ENST00000465074 DEFB129Q9H1M3 183 aa15.1■□□□□ 0.01
XRN1-204ENST00000465074 TDRD3Q9H7E2 651 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms