RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 SLC10A3P09131 477 aa25.07■■□□□ 1.6
SHISA4-202ENST00000464117 ANKRD44Q8N8A2 993 aa25.07■■□□□ 1.6
SHISA4-202ENST00000464117 MTMR14Q8NCE2 650 aa25.07■■□□□ 1.6
SHISA4-202ENST00000464117 PUS3Q9BZE2 481 aaKnown RBP25.07■■□□□ 1.6
SHISA4-202ENST00000464117 USP44Q9H0E7 712 aa25.07■■□□□ 1.6
SHISA4-202ENST00000464117 SCAF8Q9UPN6 1271 aaKnown RBP25.06■■□□□ 1.6
SHISA4-202ENST00000464117 NF2P35240 595 aa25.05■■□□□ 1.6
SHISA4-202ENST00000464117 DLGAP5Q15398 846 aa25.05■■□□□ 1.6
SHISA4-202ENST00000464117 TSKSQ9UJT2 592 aa25.05■■□□□ 1.6
SHISA4-202ENST00000464117 HIBADHP31937 336 aaKnown RBP25.04■■□□□ 1.6
SHISA4-202ENST00000464117 KIF23Q02241 960 aaPredicted RBP25.04■■□□□ 1.6
SHISA4-202ENST00000464117 FAM205AQ6ZU69 1335 aa25.04■■□□□ 1.6
SHISA4-202ENST00000464117 PRAMEF18Q5VWM3 479 aa25.03■■□□□ 1.6
SHISA4-202ENST00000464117 REM2Q8IYK8 340 aaPredicted RBP25.03■■□□□ 1.6
SHISA4-202ENST00000464117 TDRD7Q8NHU6 1098 aaKnown RBP25.03■■□□□ 1.6
SHISA4-202ENST00000464117 FAM84BQ96KN1 310 aaPredicted RBP25.03■■□□□ 1.6
SHISA4-202ENST00000464117 SAGE1Q9NXZ1 904 aa25.03■■□□□ 1.6
SHISA4-202ENST00000464117 COL1A1P02452 1464 aaPredicted RBP25.02■■□□□ 1.6
SHISA4-202ENST00000464117 RASAL3Q86YV0 1011 aa25.02■■□□□ 1.6
SHISA4-202ENST00000464117 F8W031 263 aaPredicted RBP25.01■■□□□ 1.59
SHISA4-202ENST00000464117 GYG1P46976 350 aa25.01■■□□□ 1.59
SHISA4-202ENST00000464117 LRRC24Q50LG9 513 aa25.01■■□□□ 1.59
SHISA4-202ENST00000464117 METTL24Q5JXM2 366 aa25.01■■□□□ 1.59
SHISA4-202ENST00000464117 MYO1BO43795 1136 aa25■■□□□ 1.59
SHISA4-202ENST00000464117 TTLL12Q14166 644 aaPredicted RBP25■■□□□ 1.59
SHISA4-202ENST00000464117 CFAP100Q494V2 611 aa25■■□□□ 1.59
SHISA4-202ENST00000464117 MOB2Q70IA6 237 aa25■■□□□ 1.59
SHISA4-202ENST00000464117 JAG2Q9Y219 1238 aa25■■□□□ 1.59
SHISA4-202ENST00000464117 SPDYE2BA6NHP3 402 aa24.99■■□□□ 1.59
SHISA4-202ENST00000464117 UBE2Q2LH0YL09 131 aa24.99■■□□□ 1.59
SHISA4-202ENST00000464117 PDE8BO95263 885 aa24.99■■□□□ 1.59
SHISA4-202ENST00000464117 SPDYE6P0CI01 402 aa24.99■■□□□ 1.59
SHISA4-202ENST00000464117 MFSD14BQ5SR56 506 aa24.99■■□□□ 1.59
SHISA4-202ENST00000464117 VGLL2Q8N8G2 317 aa24.99■■□□□ 1.59
SHISA4-202ENST00000464117 CSRNP1Q96S65 589 aa24.99■■□□□ 1.59
SHISA4-202ENST00000464117 API5Q9BZZ5 524 aaKnown RBP24.99■■□□□ 1.59
SHISA4-202ENST00000464117 NOB1Q9ULX3 412 aaKnown RBP24.99■■□□□ 1.59
SHISA4-202ENST00000464117 FBXO33Q7Z6M2 555 aa24.98■■□□□ 1.59
SHISA4-202ENST00000464117 VPS37DQ86XT2 251 aa24.98■■□□□ 1.59
SHISA4-202ENST00000464117 DEFB129Q9H1M3 183 aa24.98■■□□□ 1.59
SHISA4-202ENST00000464117 PPP2R3BQ9Y5P8 575 aa24.98■■□□□ 1.59
SHISA4-202ENST00000464117 ECM29Q5VYK3 1845 aa24.98■■□□□ 1.59
SHISA4-202ENST00000464117 CAVIN4Q5BKX8 364 aa24.97■■□□□ 1.59
SHISA4-202ENST00000464117 ARMC9Q7Z3E5 817 aa24.97■■□□□ 1.59
SHISA4-202ENST00000464117 KLHDC4Q8TBB5 520 aa24.97■■□□□ 1.59
SHISA4-202ENST00000464117 UBTFL1P0CB47 393 aaPredicted RBP24.96■■□□□ 1.59
SHISA4-202ENST00000464117 ABHD8Q96I13 439 aa24.96■■□□□ 1.59
SHISA4-202ENST00000464117 PRMT6Q96LA8 375 aaPredicted RBP24.96■■□□□ 1.59
SHISA4-202ENST00000464117 RNF186Q9NXI6 227 aa24.96■■□□□ 1.59
SHISA4-202ENST00000464117 SERPINA10Q9UK55 444 aa24.96■■□□□ 1.59
SHISA4-202ENST00000464117 PCDHAC2Q9Y5I4 1007 aa24.96■■□□□ 1.59
SHISA4-202ENST00000464117 AKAP11Q9UKA4 1901 aa24.96■■□□□ 1.59
SHISA4-202ENST00000464117 KIF16BQ96L93 1317 aa24.95■■□□□ 1.58
SHISA4-202ENST00000464117 CASP8AP2Q9UKL3 1982 aa24.95■■□□□ 1.58
SHISA4-202ENST00000464117 RFX5P48382 616 aaPredicted RBP24.95■■□□□ 1.58
SHISA4-202ENST00000464117 RBM5P52756 815 aaKnown RBP eCLIP24.95■■□□□ 1.58
SHISA4-202ENST00000464117 RARSP54136 660 aaKnown RBP24.95■■□□□ 1.58
SHISA4-202ENST00000464117 TTF2Q9UNY4 1162 aaKnown RBP24.95■■□□□ 1.58
SHISA4-202ENST00000464117 HDAC5Q9UQL6 1122 aa24.95■■□□□ 1.58
SHISA4-202ENST00000464117 EYA2O00167 538 aa24.94■■□□□ 1.58
SHISA4-202ENST00000464117 PUM3Q15397 648 aaKnown RBP24.94■■□□□ 1.58
SHISA4-202ENST00000464117 TBC1D22AQ8WUA7 517 aa24.94■■□□□ 1.58
SHISA4-202ENST00000464117 ARAP2Q8WZ64 1704 aa24.94■■□□□ 1.58
SHISA4-202ENST00000464117 CLRN2A0PK11 232 aa24.93■■□□□ 1.58
SHISA4-202ENST00000464117 TRPA1O75762 1119 aa24.93■■□□□ 1.58
SHISA4-202ENST00000464117 PTPN12Q05209 780 aaKnown RBP24.93■■□□□ 1.58
SHISA4-202ENST00000464117 ARHGAP45Q92619 1136 aa24.93■■□□□ 1.58
SHISA4-202ENST00000464117 VEZTQ9HBM0 779 aa24.93■■□□□ 1.58
SHISA4-202ENST00000464117 FBXO3Q9UK99 471 aa24.93■■□□□ 1.58
SHISA4-202ENST00000464117 FRAT2O75474 233 aaPredicted RBP24.92■■□□□ 1.58
SHISA4-202ENST00000464117 IFIT1P09914 478 aaKnown RBP24.92■■□□□ 1.58
SHISA4-202ENST00000464117 FGFR2P21802 821 aa24.92■■□□□ 1.58
SHISA4-202ENST00000464117 LDLRAD1Q5T700 205 aa24.92■■□□□ 1.58
SHISA4-202ENST00000464117 PPP1R12BO60237 982 aaPredicted RBP24.91■■□□□ 1.58
SHISA4-202ENST00000464117 TNFAIP1Q13829 316 aa24.91■■□□□ 1.58
SHISA4-202ENST00000464117 PRKG1Q13976 671 aa24.91■■□□□ 1.58
SHISA4-202ENST00000464117 MAP3K11Q16584 847 aa24.91■■□□□ 1.58
SHISA4-202ENST00000464117 SUPT20HL1Q3ZLR7 823 aa24.91■■□□□ 1.58
SHISA4-202ENST00000464117 ANGEL1Q9UNK9 670 aaKnown RBP24.91■■□□□ 1.58
SHISA4-202ENST00000464117 IQSEC3Q9UPP2 1182 aaPredicted RBP24.91■■□□□ 1.58
SHISA4-202ENST00000464117 BCAMP50895 628 aa24.9■■□□□ 1.58
SHISA4-202ENST00000464117 SPDYE2Q495Y8 402 aa24.9■■□□□ 1.58
SHISA4-202ENST00000464117 AOX1Q06278 1338 aa24.89■■□□□ 1.58
SHISA4-202ENST00000464117 UNCXA6NJT0 531 aa24.89■■□□□ 1.58
SHISA4-202ENST00000464117 SLC5A1P13866 664 aa24.89■■□□□ 1.58
SHISA4-202ENST00000464117 HDLBPQ00341 1268 aaKnown RBP24.89■■□□□ 1.58
SHISA4-202ENST00000464117 CHAF1AQ13111 956 aaPredicted RBP24.89■■□□□ 1.58
SHISA4-202ENST00000464117 DZIP1LQ8IYY4 767 aaKnown RBP24.89■■□□□ 1.58
SHISA4-202ENST00000464117 LPIN2Q92539 896 aa24.89■■□□□ 1.58
SHISA4-202ENST00000464117 MCOLN1Q9GZU1 580 aa24.89■■□□□ 1.58
SHISA4-202ENST00000464117 CIAO1O76071 339 aa24.88■■□□□ 1.57
SHISA4-202ENST00000464117 CRKP46108 304 aa24.88■■□□□ 1.57
SHISA4-202ENST00000464117 TM4SF4P48230 202 aa24.88■■□□□ 1.57
SHISA4-202ENST00000464117 RASA3Q14644 834 aa24.88■■□□□ 1.57
SHISA4-202ENST00000464117 ATG9AQ7Z3C6 839 aa24.88■■□□□ 1.57
SHISA4-202ENST00000464117 ZNF70Q9UC06 446 aaPredicted RBP24.88■■□□□ 1.57
SHISA4-202ENST00000464117 LRRFIP2Q9Y608 721 aaKnown RBP24.88■■□□□ 1.57
SHISA4-202ENST00000464117 SSC5DA1L4H1 1573 aa24.88■■□□□ 1.57
SHISA4-202ENST00000464117 SREBF2Q12772 1141 aa24.87■■□□□ 1.57
SHISA4-202ENST00000464117 DGKZQ13574 1117 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms