RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 MTMR14Q8NCE2 650 aa22.06■■□□□ 1.12
COL5A1-204ENST00000463925 BICC1Q9H694 974 aaKnown RBP22.06■■□□□ 1.12
COL5A1-204ENST00000463925 ALDH1L2Q3SY69 923 aa22.05■■□□□ 1.12
COL5A1-204ENST00000463925 PRAMEF18Q5VWM3 479 aa22.05■■□□□ 1.12
COL5A1-204ENST00000463925 REM2Q8IYK8 340 aaPredicted RBP22.05■■□□□ 1.12
COL5A1-204ENST00000463925 CASP8AP2Q9UKL3 1982 aa22.05■■□□□ 1.12
COL5A1-204ENST00000463925 MROH5Q6ZUA9 1318 aa22.05■■□□□ 1.12
COL5A1-204ENST00000463925 DLGAP5Q15398 846 aa22.04■■□□□ 1.12
COL5A1-204ENST00000463925 MOB2Q70IA6 237 aa22.04■■□□□ 1.12
COL5A1-204ENST00000463925 ANKRD44Q8N8A2 993 aa22.04■■□□□ 1.12
COL5A1-204ENST00000463925 PUS3Q9BZE2 481 aaKnown RBP22.04■■□□□ 1.12
COL5A1-204ENST00000463925 RIPOR2Q9Y4F9 1068 aa22.04■■□□□ 1.12
COL5A1-204ENST00000463925 FAM205AQ6ZU69 1335 aa22.04■■□□□ 1.12
COL5A1-204ENST00000463925 ECM29Q5VYK3 1845 aa22.03■■□□□ 1.12
COL5A1-204ENST00000463925 CSRNP1Q96S65 589 aa22.03■■□□□ 1.12
COL5A1-204ENST00000463925 AKAP11Q9UKA4 1901 aa22.03■■□□□ 1.12
COL5A1-204ENST00000463925 UBE2Q2LH0YL09 131 aa22.02■■□□□ 1.12
COL5A1-204ENST00000463925 TRMT2AQ8IZ69 625 aaKnown RBP22.02■■□□□ 1.12
COL5A1-204ENST00000463925 TDRD7Q8NHU6 1098 aaKnown RBP22.02■■□□□ 1.12
COL5A1-204ENST00000463925 CDCA7LQ96GN5 454 aa22.02■■□□□ 1.12
COL5A1-204ENST00000463925 RNF186Q9NXI6 227 aa22.02■■□□□ 1.12
COL5A1-204ENST00000463925 ARAP2Q8WZ64 1704 aa22.01■■□□□ 1.11
COL5A1-204ENST00000463925 CCER2I3L3R5 266 aa22.01■■□□□ 1.11
COL5A1-204ENST00000463925 CT47B1P0C2W7 299 aaPredicted RBP22.01■■□□□ 1.11
COL5A1-204ENST00000463925 TTLL12Q14166 644 aaPredicted RBP22.01■■□□□ 1.11
COL5A1-204ENST00000463925 USP44Q9H0E7 712 aa22.01■■□□□ 1.11
COL5A1-204ENST00000463925 SPDYE2BA6NHP3 402 aa22■■□□□ 1.11
COL5A1-204ENST00000463925 F8W031 263 aaPredicted RBP22■■□□□ 1.11
COL5A1-204ENST00000463925 SPDYE6P0CI01 402 aa22■■□□□ 1.11
COL5A1-204ENST00000463925 HIBADHP31937 336 aaKnown RBP22■■□□□ 1.11
COL5A1-204ENST00000463925 CFAP100Q494V2 611 aa22■■□□□ 1.11
COL5A1-204ENST00000463925 ARMC9Q7Z3E5 817 aa22■■□□□ 1.11
COL5A1-204ENST00000463925 FAM84BQ96KN1 310 aaPredicted RBP22■■□□□ 1.11
COL5A1-204ENST00000463925 JAG2Q9Y219 1238 aa22■■□□□ 1.11
COL5A1-204ENST00000463925 PPP2R3BQ9Y5P8 575 aa22■■□□□ 1.11
COL5A1-204ENST00000463925 MYO1BO43795 1136 aa21.99■■□□□ 1.11
COL5A1-204ENST00000463925 TRPA1O75762 1119 aa21.99■■□□□ 1.11
COL5A1-204ENST00000463925 GYG1P46976 350 aa21.99■■□□□ 1.11
COL5A1-204ENST00000463925 VGLL2Q8N8G2 317 aa21.99■■□□□ 1.11
COL5A1-204ENST00000463925 DEFB129Q9H1M3 183 aa21.99■■□□□ 1.11
COL5A1-204ENST00000463925 SMC4Q9NTJ3 1288 aa21.99■■□□□ 1.11
COL5A1-204ENST00000463925 PCDHAC2Q9Y5I4 1007 aa21.99■■□□□ 1.11
COL5A1-204ENST00000463925 LRRC24Q50LG9 513 aa21.98■■□□□ 1.11
COL5A1-204ENST00000463925 MFSD14BQ5SR56 506 aa21.98■■□□□ 1.11
COL5A1-204ENST00000463925 MCOLN1Q9GZU1 580 aa21.98■■□□□ 1.11
COL5A1-204ENST00000463925 METTL24Q5JXM2 366 aa21.97■■□□□ 1.11
COL5A1-204ENST00000463925 PRMT6Q96LA8 375 aaPredicted RBP21.97■■□□□ 1.11
COL5A1-204ENST00000463925 SSC5DA1L4H1 1573 aa21.96■■□□□ 1.11
COL5A1-204ENST00000463925 PDE8BO95263 885 aa21.96■■□□□ 1.11
COL5A1-204ENST00000463925 LDLRAD1Q5T700 205 aa21.96■■□□□ 1.11
COL5A1-204ENST00000463925 FBXO33Q7Z6M2 555 aa21.96■■□□□ 1.11
COL5A1-204ENST00000463925 SERPINA10Q9UK55 444 aa21.96■■□□□ 1.11
COL5A1-204ENST00000463925 CLRN2A0PK11 232 aa21.95■■□□□ 1.1
COL5A1-204ENST00000463925 PTPN12Q05209 780 aaKnown RBP21.95■■□□□ 1.1
COL5A1-204ENST00000463925 DGKZQ13574 1117 aa21.95■■□□□ 1.1
COL5A1-204ENST00000463925 MAP3K11Q16584 847 aa21.95■■□□□ 1.1
COL5A1-204ENST00000463925 TTF2Q9UNY4 1162 aaKnown RBP21.95■■□□□ 1.1
COL5A1-204ENST00000463925 RBM5P52756 815 aaKnown RBP eCLIP21.94■■□□□ 1.1
COL5A1-204ENST00000463925 PRKG1Q13976 671 aa21.94■■□□□ 1.1
COL5A1-204ENST00000463925 CAVIN4Q5BKX8 364 aa21.94■■□□□ 1.1
COL5A1-204ENST00000463925 VPS37DQ86XT2 251 aa21.94■■□□□ 1.1
COL5A1-204ENST00000463925 KLHDC4Q8TBB5 520 aa21.94■■□□□ 1.1
COL5A1-204ENST00000463925 ANGEL1Q9UNK9 670 aaKnown RBP21.94■■□□□ 1.1
COL5A1-204ENST00000463925 AOX1Q06278 1338 aa21.94■■□□□ 1.1
COL5A1-204ENST00000463925 KIF16BQ96L93 1317 aa21.94■■□□□ 1.1
COL5A1-204ENST00000463925 TM4SF4P48230 202 aa21.93■■□□□ 1.1
COL5A1-204ENST00000463925 RFX5P48382 616 aaPredicted RBP21.93■■□□□ 1.1
COL5A1-204ENST00000463925 VEZTQ9HBM0 779 aa21.93■■□□□ 1.1
COL5A1-204ENST00000463925 CCDC85CA6NKD9 419 aa21.92■■□□□ 1.1
COL5A1-204ENST00000463925 TNFAIP1Q13829 316 aa21.92■■□□□ 1.1
COL5A1-204ENST00000463925 PUM3Q15397 648 aaKnown RBP21.92■■□□□ 1.1
COL5A1-204ENST00000463925 SUPT20HL1Q3ZLR7 823 aa21.92■■□□□ 1.1
COL5A1-204ENST00000463925 SPDYE2Q495Y8 402 aa21.92■■□□□ 1.1
COL5A1-204ENST00000463925 TBC1D22AQ8WUA7 517 aa21.92■■□□□ 1.1
COL5A1-204ENST00000463925 UNCXA6NJT0 531 aa21.91■■□□□ 1.1
COL5A1-204ENST00000463925 EYA2O00167 538 aa21.91■■□□□ 1.1
COL5A1-204ENST00000463925 PPP1R12BO60237 982 aaPredicted RBP21.91■■□□□ 1.1
COL5A1-204ENST00000463925 FGFR2P21802 821 aa21.91■■□□□ 1.1
COL5A1-204ENST00000463925 SREBF2Q12772 1141 aa21.91■■□□□ 1.1
COL5A1-204ENST00000463925 SPRYD7Q5W111 196 aa21.91■■□□□ 1.1
COL5A1-204ENST00000463925 API5Q9BZZ5 524 aaKnown RBP21.91■■□□□ 1.1
COL5A1-204ENST00000463925 NOB1Q9ULX3 412 aaKnown RBP21.91■■□□□ 1.1
COL5A1-204ENST00000463925 IFIT1P09914 478 aaKnown RBP21.9■■□□□ 1.1
COL5A1-204ENST00000463925 UBTFL1P0CB47 393 aaPredicted RBP21.9■■□□□ 1.1
COL5A1-204ENST00000463925 RASA3Q14644 834 aa21.9■■□□□ 1.1
COL5A1-204ENST00000463925 DZIP1LQ8IYY4 767 aaKnown RBP21.9■■□□□ 1.1
COL5A1-204ENST00000463925 ZNF70Q9UC06 446 aaPredicted RBP21.9■■□□□ 1.1
COL5A1-204ENST00000463925 FZD1Q9UP38 647 aa21.9■■□□□ 1.1
COL5A1-204ENST00000463925 IQSEC3Q9UPP2 1182 aaPredicted RBP21.9■■□□□ 1.1
COL5A1-204ENST00000463925 CRKP46108 304 aa21.89■■□□□ 1.09
COL5A1-204ENST00000463925 HDLBPQ00341 1268 aaKnown RBP21.89■■□□□ 1.09
COL5A1-204ENST00000463925 MKRN3Q13064 507 aaKnown RBP21.89■■□□□ 1.09
COL5A1-204ENST00000463925 NBPF12Q5TAG4 269 aaPredicted RBP21.89■■□□□ 1.09
COL5A1-204ENST00000463925 FBXO3Q9UK99 471 aa21.89■■□□□ 1.09
COL5A1-204ENST00000463925 LAMB1P07942 1786 aa21.89■■□□□ 1.09
COL5A1-204ENST00000463925 FRAT2O75474 233 aaPredicted RBP21.88■■□□□ 1.09
COL5A1-204ENST00000463925 BCAMP50895 628 aa21.88■■□□□ 1.09
COL5A1-204ENST00000463925 CHAF1AQ13111 956 aaPredicted RBP21.88■■□□□ 1.09
COL5A1-204ENST00000463925 NOM1Q5C9Z4 860 aaKnown RBP21.88■■□□□ 1.09
COL5A1-204ENST00000463925 CFHR5Q9BXR6 569 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 240.1 ms