RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 PUS3Q9BZE2 481 aaKnown RBP27.85■■■□□ 2.05
PDLIM7-206ENST00000463411 TSKSQ9UJT2 592 aa27.85■■■□□ 2.05
PDLIM7-206ENST00000463411 SCAF8Q9UPN6 1271 aaKnown RBP27.85■■■□□ 2.05
PDLIM7-206ENST00000463411 DLGAP5Q15398 846 aa27.84■■■□□ 2.05
PDLIM7-206ENST00000463411 ANKRD44Q8N8A2 993 aa27.84■■■□□ 2.05
PDLIM7-206ENST00000463411 ARAP2Q8WZ64 1704 aa27.84■■■□□ 2.05
PDLIM7-206ENST00000463411 SLC10A3P09131 477 aa27.83■■■□□ 2.05
PDLIM7-206ENST00000463411 CERS5Q8N5B7 392 aa27.83■■■□□ 2.05
PDLIM7-206ENST00000463411 USP44Q9H0E7 712 aa27.83■■■□□ 2.05
PDLIM7-206ENST00000463411 COL1A1P02452 1464 aaPredicted RBP27.83■■■□□ 2.04
PDLIM7-206ENST00000463411 TTLL12Q14166 644 aaPredicted RBP27.82■■■□□ 2.04
PDLIM7-206ENST00000463411 ZIC5Q96T25 663 aa27.82■■■□□ 2.04
PDLIM7-206ENST00000463411 RIPOR2Q9Y4F9 1068 aa27.82■■■□□ 2.04
PDLIM7-206ENST00000463411 F8W031 263 aaPredicted RBP27.81■■■□□ 2.04
PDLIM7-206ENST00000463411 HIBADHP31937 336 aaKnown RBP27.81■■■□□ 2.04
PDLIM7-206ENST00000463411 KIF23Q02241 960 aaPredicted RBP27.81■■■□□ 2.04
PDLIM7-206ENST00000463411 METTL24Q5JXM2 366 aa27.81■■■□□ 2.04
PDLIM7-206ENST00000463411 ZBED3Q96IU2 234 aaPredicted RBP27.81■■■□□ 2.04
PDLIM7-206ENST00000463411 JAG2Q9Y219 1238 aa27.81■■■□□ 2.04
PDLIM7-206ENST00000463411 MYO1BO43795 1136 aa27.8■■■□□ 2.04
PDLIM7-206ENST00000463411 GYG1P46976 350 aa27.8■■■□□ 2.04
PDLIM7-206ENST00000463411 PRAMEF18Q5VWM3 479 aa27.8■■■□□ 2.04
PDLIM7-206ENST00000463411 MTMR14Q8NCE2 650 aa27.8■■■□□ 2.04
PDLIM7-206ENST00000463411 AKAP11Q9UKA4 1901 aa27.8■■■□□ 2.04
PDLIM7-206ENST00000463411 FAM205AQ6ZU69 1335 aa27.79■■■□□ 2.04
PDLIM7-206ENST00000463411 VPS37DQ86XT2 251 aa27.79■■■□□ 2.04
PDLIM7-206ENST00000463411 RASAL3Q86YV0 1011 aa27.79■■■□□ 2.04
PDLIM7-206ENST00000463411 TDRD7Q8NHU6 1098 aaKnown RBP27.79■■■□□ 2.04
PDLIM7-206ENST00000463411 CFAP100Q494V2 611 aa27.78■■■□□ 2.04
PDLIM7-206ENST00000463411 LRRC24Q50LG9 513 aa27.78■■■□□ 2.04
PDLIM7-206ENST00000463411 API5Q9BZZ5 524 aaKnown RBP27.78■■■□□ 2.04
PDLIM7-206ENST00000463411 NOB1Q9ULX3 412 aaKnown RBP27.78■■■□□ 2.04
PDLIM7-206ENST00000463411 CAVIN4Q5BKX8 364 aa27.77■■■□□ 2.04
PDLIM7-206ENST00000463411 MFSD14BQ5SR56 506 aa27.77■■■□□ 2.04
PDLIM7-206ENST00000463411 REM2Q8IYK8 340 aaPredicted RBP27.77■■■□□ 2.04
PDLIM7-206ENST00000463411 FAM84BQ96KN1 310 aaPredicted RBP27.77■■■□□ 2.04
PDLIM7-206ENST00000463411 SAGE1Q9NXZ1 904 aa27.77■■■□□ 2.04
PDLIM7-206ENST00000463411 UBTFL1P0CB47 393 aaPredicted RBP27.76■■■□□ 2.03
PDLIM7-206ENST00000463411 RBM5P52756 815 aaKnown RBP eCLIP27.76■■■□□ 2.03
PDLIM7-206ENST00000463411 MOB2Q70IA6 237 aa27.76■■■□□ 2.03
PDLIM7-206ENST00000463411 ARMC9Q7Z3E5 817 aa27.76■■■□□ 2.03
PDLIM7-206ENST00000463411 KIF16BQ96L93 1317 aa27.75■■■□□ 2.03
PDLIM7-206ENST00000463411 SPDYE2BA6NHP3 402 aa27.75■■■□□ 2.03
PDLIM7-206ENST00000463411 UBE2Q2LH0YL09 131 aa27.75■■■□□ 2.03
PDLIM7-206ENST00000463411 PDE8BO95263 885 aa27.75■■■□□ 2.03
PDLIM7-206ENST00000463411 SPDYE6P0CI01 402 aa27.75■■■□□ 2.03
PDLIM7-206ENST00000463411 KLHDC4Q8TBB5 520 aa27.75■■■□□ 2.03
PDLIM7-206ENST00000463411 HDAC5Q9UQL6 1122 aa27.75■■■□□ 2.03
PDLIM7-206ENST00000463411 PPP2R3BQ9Y5P8 575 aa27.75■■■□□ 2.03
PDLIM7-206ENST00000463411 FRAT2O75474 233 aaPredicted RBP27.74■■■□□ 2.03
PDLIM7-206ENST00000463411 DEFB129Q9H1M3 183 aa27.74■■■□□ 2.03
PDLIM7-206ENST00000463411 VGLL2Q8N8G2 317 aa27.73■■■□□ 2.03
PDLIM7-206ENST00000463411 TTF2Q9UNY4 1162 aaKnown RBP27.73■■■□□ 2.03
PDLIM7-206ENST00000463411 CASP8AP2Q9UKL3 1982 aa27.72■■■□□ 2.03
PDLIM7-206ENST00000463411 CLRN2A0PK11 232 aa27.72■■■□□ 2.03
PDLIM7-206ENST00000463411 PUM3Q15397 648 aaKnown RBP27.72■■■□□ 2.03
PDLIM7-206ENST00000463411 VEZTQ9HBM0 779 aa27.72■■■□□ 2.03
PDLIM7-206ENST00000463411 PCDHAC2Q9Y5I4 1007 aa27.72■■■□□ 2.03
PDLIM7-206ENST00000463411 IFIT1P09914 478 aaKnown RBP27.71■■■□□ 2.03
PDLIM7-206ENST00000463411 RARSP54136 660 aaKnown RBP27.71■■■□□ 2.03
PDLIM7-206ENST00000463411 PRKG1Q13976 671 aa27.71■■■□□ 2.03
PDLIM7-206ENST00000463411 FBXO33Q7Z6M2 555 aa27.71■■■□□ 2.03
PDLIM7-206ENST00000463411 ABHD8Q96I13 439 aa27.71■■■□□ 2.03
PDLIM7-206ENST00000463411 CSRNP1Q96S65 589 aa27.71■■■□□ 2.03
PDLIM7-206ENST00000463411 SERPINA10Q9UK55 444 aa27.71■■■□□ 2.03
PDLIM7-206ENST00000463411 MYH13Q9UKX3 1938 aa27.71■■■□□ 2.03
PDLIM7-206ENST00000463411 EYA2O00167 538 aa27.7■■■□□ 2.02
PDLIM7-206ENST00000463411 TBC1D22AQ8WUA7 517 aa27.7■■■□□ 2.02
PDLIM7-206ENST00000463411 PRMT6Q96LA8 375 aaPredicted RBP27.7■■■□□ 2.02
PDLIM7-206ENST00000463411 RNF186Q9NXI6 227 aa27.7■■■□□ 2.02
PDLIM7-206ENST00000463411 IQSEC3Q9UPP2 1182 aaPredicted RBP27.7■■■□□ 2.02
PDLIM7-206ENST00000463411 TRPA1O75762 1119 aa27.69■■■□□ 2.02
PDLIM7-206ENST00000463411 RFX5P48382 616 aaPredicted RBP27.69■■■□□ 2.02
PDLIM7-206ENST00000463411 CHAF1AQ13111 956 aaPredicted RBP27.69■■■□□ 2.02
PDLIM7-206ENST00000463411 ANGEL1Q9UNK9 670 aaKnown RBP27.69■■■□□ 2.02
PDLIM7-206ENST00000463411 PTPN12Q05209 780 aaKnown RBP27.68■■■□□ 2.02
PDLIM7-206ENST00000463411 TNFAIP1Q13829 316 aa27.68■■■□□ 2.02
PDLIM7-206ENST00000463411 PPP1R12BO60237 982 aaPredicted RBP27.67■■■□□ 2.02
PDLIM7-206ENST00000463411 SLC5A1P13866 664 aa27.67■■■□□ 2.02
PDLIM7-206ENST00000463411 SUPT20HL1Q3ZLR7 823 aa27.67■■■□□ 2.02
PDLIM7-206ENST00000463411 ARHGAP45Q92619 1136 aa27.67■■■□□ 2.02
PDLIM7-206ENST00000463411 FBXO3Q9UK99 471 aa27.67■■■□□ 2.02
PDLIM7-206ENST00000463411 SSC5DA1L4H1 1573 aa27.65■■■□□ 2.02
PDLIM7-206ENST00000463411 FGFR2P21802 821 aa27.65■■■□□ 2.02
PDLIM7-206ENST00000463411 CRKP46108 304 aa27.65■■■□□ 2.02
PDLIM7-206ENST00000463411 BCAMP50895 628 aa27.65■■■□□ 2.02
PDLIM7-206ENST00000463411 SPDYE2Q495Y8 402 aa27.65■■■□□ 2.02
PDLIM7-206ENST00000463411 LPIN2Q92539 896 aa27.65■■■□□ 2.02
PDLIM7-206ENST00000463411 LRRFIP2Q9Y608 721 aaKnown RBP27.65■■■□□ 2.02
PDLIM7-206ENST00000463411 IPO8O15397 1037 aaKnown RBP27.64■■■□□ 2.02
PDLIM7-206ENST00000463411 CIAO1O76071 339 aa27.64■■■□□ 2.02
PDLIM7-206ENST00000463411 DZIP1LQ8IYY4 767 aaKnown RBP27.64■■■□□ 2.02
PDLIM7-206ENST00000463411 SIL1Q9H173 461 aa27.64■■■□□ 2.02
PDLIM7-206ENST00000463411 SREBF2Q12772 1141 aa27.63■■■□□ 2.01
PDLIM7-206ENST00000463411 RASA3Q14644 834 aa27.63■■■□□ 2.01
PDLIM7-206ENST00000463411 LDLRAD1Q5T700 205 aa27.63■■■□□ 2.01
PDLIM7-206ENST00000463411 ZNF70Q9UC06 446 aaPredicted RBP27.63■■■□□ 2.01
PDLIM7-206ENST00000463411 MAST3O60307 1309 aa27.63■■■□□ 2.01
PDLIM7-206ENST00000463411 AOX1Q06278 1338 aa27.63■■■□□ 2.01
PDLIM7-206ENST00000463411 HDLBPQ00341 1268 aaKnown RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms