RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 CIAO1O76071 339 aa23.52■■□□□ 1.36
SLC6A1-204ENST00000462473 VEGFBP49765 207 aa23.52■■□□□ 1.36
SLC6A1-204ENST00000462473 FKBP1AP62942 108 aaKnown RBP23.52■■□□□ 1.36
SLC6A1-204ENST00000462473 NBPF9Q3BBW0 867 aa23.52■■□□□ 1.36
SLC6A1-204ENST00000462473 FBXO33Q7Z6M2 555 aa23.52■■□□□ 1.36
SLC6A1-204ENST00000462473 CEP126Q9P2H0 1117 aa23.52■■□□□ 1.36
SLC6A1-204ENST00000462473 PA2G4Q9UQ80 394 aaKnown RBP23.52■■□□□ 1.36
SLC6A1-204ENST00000462473 F8W031 263 aaPredicted RBP23.51■■□□□ 1.35
SLC6A1-204ENST00000462473 WNT10BO00744 389 aa23.51■■□□□ 1.35
SLC6A1-204ENST00000462473 FRAT2O75474 233 aaPredicted RBP23.51■■□□□ 1.35
SLC6A1-204ENST00000462473 FGFR2P21802 821 aa23.51■■□□□ 1.35
SLC6A1-204ENST00000462473 PAXIP1Q6ZW49 1069 aaPredicted RBP23.51■■□□□ 1.35
SLC6A1-204ENST00000462473 COPRSQ9NQ92 184 aa23.51■■□□□ 1.35
SLC6A1-204ENST00000462473 TLL2Q9Y6L7 1015 aa23.51■■□□□ 1.35
SLC6A1-204ENST00000462473 FAM205AQ6ZU69 1335 aa23.51■■□□□ 1.35
SLC6A1-204ENST00000462473 SLC5A1P13866 664 aa23.5■■□□□ 1.35
SLC6A1-204ENST00000462473 IL15P40933 162 aaPredicted RBP23.5■■□□□ 1.35
SLC6A1-204ENST00000462473 LPIN2Q92539 896 aa23.5■■□□□ 1.35
SLC6A1-204ENST00000462473 IQSEC3Q9UPP2 1182 aaPredicted RBP23.5■■□□□ 1.35
SLC6A1-204ENST00000462473 ZNF646O15015 1829 aaPredicted RBP23.49■■□□□ 1.35
SLC6A1-204ENST00000462473 BCAMP50895 628 aa23.49■■□□□ 1.35
SLC6A1-204ENST00000462473 MTX1Q13505 466 aa23.49■■□□□ 1.35
SLC6A1-204ENST00000462473 MFSD14BQ5SR56 506 aa23.49■■□□□ 1.35
SLC6A1-204ENST00000462473 ITPRIPQ8IWB1 547 aa23.49■■□□□ 1.35
SLC6A1-204ENST00000462473 PITPNM2Q9BZ72 1349 aa23.49■■□□□ 1.35
SLC6A1-204ENST00000462473 TRPM7Q96QT4 1865 aa23.49■■□□□ 1.35
SLC6A1-204ENST00000462473 DLGAP5Q15398 846 aa23.48■■□□□ 1.35
SLC6A1-204ENST00000462473 SAPCD2Q86UD0 394 aa23.48■■□□□ 1.35
SLC6A1-204ENST00000462473 RLBP1P12271 317 aa23.47■■□□□ 1.35
SLC6A1-204ENST00000462473 CHAF1AQ13111 956 aaPredicted RBP23.47■■□□□ 1.35
SLC6A1-204ENST00000462473 WDR33Q9C0J8 1336 aaKnown RBP23.47■■□□□ 1.35
SLC6A1-204ENST00000462473 POLR2AP24928 1970 aaKnown RBP23.46■■□□□ 1.35
SLC6A1-204ENST00000462473 ECE1P42892 770 aa23.46■■□□□ 1.35
SLC6A1-204ENST00000462473 GRM1Q13255 1194 aa23.46■■□□□ 1.35
SLC6A1-204ENST00000462473 ATP2B3Q16720 1220 aa23.46■■□□□ 1.35
SLC6A1-204ENST00000462473 C2orf69Q8N8R5 385 aa23.46■■□□□ 1.35
SLC6A1-204ENST00000462473 CDCA5Q96FF9 252 aa23.46■■□□□ 1.35
SLC6A1-204ENST00000462473 GBA2Q9HCG7 927 aaPredicted RBP23.46■■□□□ 1.35
SLC6A1-204ENST00000462473 SCAF8Q9UPN6 1271 aaKnown RBP23.46■■□□□ 1.35
SLC6A1-204ENST00000462473 RBM5P52756 815 aaKnown RBP eCLIP23.45■■□□□ 1.34
SLC6A1-204ENST00000462473 CFAP100Q494V2 611 aa23.45■■□□□ 1.34
SLC6A1-204ENST00000462473 CYP4F22Q6NT55 531 aa23.45■■□□□ 1.34
SLC6A1-204ENST00000462473 ZBED3Q96IU2 234 aaPredicted RBP23.45■■□□□ 1.34
SLC6A1-204ENST00000462473 CAPNS2Q96L46 248 aa23.45■■□□□ 1.34
SLC6A1-204ENST00000462473 PNMA6EA0A0J9YXQ4 647 aa23.44■■□□□ 1.34
SLC6A1-204ENST00000462473 HSPA1AP0DMV8 641 aaKnown RBP23.44■■□□□ 1.34
SLC6A1-204ENST00000462473 HSPA1BP0DMV9 641 aaKnown RBP23.44■■□□□ 1.34
SLC6A1-204ENST00000462473 MS4A1P11836 297 aa23.44■■□□□ 1.34
SLC6A1-204ENST00000462473 MTMR14Q8NCE2 650 aa23.44■■□□□ 1.34
SLC6A1-204ENST00000462473 TBC1D22AQ8WUA7 517 aa23.44■■□□□ 1.34
SLC6A1-204ENST00000462473 TTF2Q9UNY4 1162 aaKnown RBP23.44■■□□□ 1.34
SLC6A1-204ENST00000462473 ZBTB7BO15156 539 aaPredicted RBP23.43■■□□□ 1.34
SLC6A1-204ENST00000462473 HUNKP57058 714 aa23.43■■□□□ 1.34
SLC6A1-204ENST00000462473 PANK1Q8TE04 598 aa23.43■■□□□ 1.34
SLC6A1-204ENST00000462473 HHIPL1Q96JK4 782 aa23.43■■□□□ 1.34
SLC6A1-204ENST00000462473 RCAN3Q9UKA8 241 aa23.43■■□□□ 1.34
SLC6A1-204ENST00000462473 MYO1BO43795 1136 aa23.42■■□□□ 1.34
SLC6A1-204ENST00000462473 APOBEC3FQ8IUX4 373 aaKnown RBP23.42■■□□□ 1.34
SLC6A1-204ENST00000462473 C1orf115Q9H7X2 142 aa23.42■■□□□ 1.34
SLC6A1-204ENST00000462473 PCDHAC2Q9Y5I4 1007 aa23.42■■□□□ 1.34
SLC6A1-204ENST00000462473 ATP8B2P98198 1209 aa23.41■■□□□ 1.34
SLC6A1-204ENST00000462473 TFCP2Q12800 502 aa23.41■■□□□ 1.34
SLC6A1-204ENST00000462473 G3BP1Q13283 466 aaKnown RBP eCLIP23.41■■□□□ 1.34
SLC6A1-204ENST00000462473 PRMT6Q96LA8 375 aaPredicted RBP23.41■■□□□ 1.34
SLC6A1-204ENST00000462473 GNL3LQ9NVN8 582 aaKnown RBP23.41■■□□□ 1.34
SLC6A1-204ENST00000462473 AKAP2Q9Y2D5 859 aa23.41■■□□□ 1.34
SLC6A1-204ENST00000462473 SPDYE2BA6NHP3 402 aa23.4■■□□□ 1.34
SLC6A1-204ENST00000462473 SPDYE6P0CI01 402 aa23.4■■□□□ 1.34
SLC6A1-204ENST00000462473 PRAMEF18Q5VWM3 479 aa23.4■■□□□ 1.34
SLC6A1-204ENST00000462473 SERPINA10Q9UK55 444 aa23.39■■□□□ 1.33
SLC6A1-204ENST00000462473 CLRN2A0PK11 232 aa23.38■■□□□ 1.33
SLC6A1-204ENST00000462473 NF2P35240 595 aa23.38■■□□□ 1.33
SLC6A1-204ENST00000462473 TIMM10P62072 90 aa23.38■■□□□ 1.33
SLC6A1-204ENST00000462473 GRIK5Q16478 980 aa23.38■■□□□ 1.33
SLC6A1-204ENST00000462473 WDR66Q8TBY9 1149 aa23.38■■□□□ 1.33
SLC6A1-204ENST00000462473 ADORA1P30542 326 aa23.37■■□□□ 1.33
SLC6A1-204ENST00000462473 FKBP1BP68106 108 aa23.37■■□□□ 1.33
SLC6A1-204ENST00000462473 MAP2K1Q02750 393 aaPredicted RBP23.37■■□□□ 1.33
SLC6A1-204ENST00000462473 POLA2Q14181 598 aa23.37■■□□□ 1.33
SLC6A1-204ENST00000462473 RGMBQ6NW40 437 aa23.37■■□□□ 1.33
SLC6A1-204ENST00000462473 SSH3Q8TE77 659 aa23.37■■□□□ 1.33
SLC6A1-204ENST00000462473 AIDAQ96BJ3 306 aa23.37■■□□□ 1.33
SLC6A1-204ENST00000462473 VEZTQ9HBM0 779 aa23.37■■□□□ 1.33
SLC6A1-204ENST00000462473 A0A1B0GUL7 405 aa23.36■■□□□ 1.33
SLC6A1-204ENST00000462473 AOC2O75106 756 aa23.36■■□□□ 1.33
SLC6A1-204ENST00000462473 PHKA1P46020 1223 aa23.36■■□□□ 1.33
SLC6A1-204ENST00000462473 CRKP46108 304 aa23.36■■□□□ 1.33
SLC6A1-204ENST00000462473 CCDC102BQ68D86 513 aa23.36■■□□□ 1.33
SLC6A1-204ENST00000462473 NEUROD6Q96NK8 337 aa23.36■■□□□ 1.33
SLC6A1-204ENST00000462473 DEFB129Q9H1M3 183 aa23.36■■□□□ 1.33
SLC6A1-204ENST00000462473 SUGT1Q9Y2Z0 365 aa23.36■■□□□ 1.33
SLC6A1-204ENST00000462473 MAP2K2P36507 400 aa23.35■■□□□ 1.33
SLC6A1-204ENST00000462473 HDLBPQ00341 1268 aaKnown RBP23.35■■□□□ 1.33
SLC6A1-204ENST00000462473 OS9Q13438 667 aaPredicted RBP23.35■■□□□ 1.33
SLC6A1-204ENST00000462473 TTLL12Q14166 644 aaPredicted RBP23.35■■□□□ 1.33
SLC6A1-204ENST00000462473 WBP1LQ9NX94 342 aa23.35■■□□□ 1.33
SLC6A1-204ENST00000462473 DENND2AQ9ULE3 1009 aa23.35■■□□□ 1.33
SLC6A1-204ENST00000462473 MAST3O60307 1309 aa23.34■■□□□ 1.33
SLC6A1-204ENST00000462473 SEMA3EO15041 775 aa23.34■■□□□ 1.33
SLC6A1-204ENST00000462473 SURF6O75683 361 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms