RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 METTL24Q5JXM2 366 aa29.57■■■□□ 2.32
LMBR1-214ENST00000461469 PRAMEF18Q5VWM3 479 aa29.57■■■□□ 2.32
LMBR1-214ENST00000461469 ARAP2Q8WZ64 1704 aa29.57■■■□□ 2.32
LMBR1-214ENST00000461469 HUNKP57058 714 aa29.56■■■□□ 2.32
LMBR1-214ENST00000461469 ARHGAP45Q92619 1136 aa29.56■■■□□ 2.32
LMBR1-214ENST00000461469 ZIC5Q96T25 663 aa29.56■■■□□ 2.32
LMBR1-214ENST00000461469 LRRFIP2Q9Y608 721 aaKnown RBP29.56■■■□□ 2.32
LMBR1-214ENST00000461469 ECM29Q5VYK3 1845 aa29.55■■■□□ 2.32
LMBR1-214ENST00000461469 AOX1Q06278 1338 aa29.55■■■□□ 2.32
LMBR1-214ENST00000461469 F8W031 263 aaPredicted RBP29.55■■■□□ 2.32
LMBR1-214ENST00000461469 TRIM27P14373 513 aa29.55■■■□□ 2.32
LMBR1-214ENST00000461469 INTS3Q68E01 1043 aaKnown RBP29.55■■■□□ 2.32
LMBR1-214ENST00000461469 FAM205AQ6ZU69 1335 aa29.54■■■□□ 2.32
LMBR1-214ENST00000461469 PDE8BO95263 885 aa29.54■■■□□ 2.32
LMBR1-214ENST00000461469 HIBADHP31937 336 aaKnown RBP29.54■■■□□ 2.32
LMBR1-214ENST00000461469 ATG9AQ7Z3C6 839 aa29.54■■■□□ 2.32
LMBR1-214ENST00000461469 FBXO33Q7Z6M2 555 aa29.53■■■□□ 2.32
LMBR1-214ENST00000461469 IQSEC3Q9UPP2 1182 aaPredicted RBP29.53■■■□□ 2.32
LMBR1-214ENST00000461469 EYA2O00167 538 aa29.52■■■□□ 2.32
LMBR1-214ENST00000461469 FGFR2P21802 821 aa29.52■■■□□ 2.32
LMBR1-214ENST00000461469 FKBP1AP62942 108 aaKnown RBP29.52■■■□□ 2.32
LMBR1-214ENST00000461469 HDAC9Q9UKV0 1011 aa29.52■■■□□ 2.32
LMBR1-214ENST00000461469 FAM155AB1AL88 458 aaPredicted RBP29.51■■■□□ 2.31
LMBR1-214ENST00000461469 GRIK5Q16478 980 aa29.51■■■□□ 2.31
LMBR1-214ENST00000461469 MOB2Q70IA6 237 aa29.51■■■□□ 2.31
LMBR1-214ENST00000461469 C2orf69Q8N8R5 385 aa29.51■■■□□ 2.31
LMBR1-214ENST00000461469 PAPPA2Q9BXP8 1791 aa29.51■■■□□ 2.31
LMBR1-214ENST00000461469 MAP2K1Q02750 393 aaPredicted RBP29.5■■■□□ 2.31
LMBR1-214ENST00000461469 FRAT1Q92837 279 aaPredicted RBP29.5■■■□□ 2.31
LMBR1-214ENST00000461469 HSPA8P11142 646 aaKnown RBP29.49■■■□□ 2.31
LMBR1-214ENST00000461469 MMP14P50281 582 aa29.49■■■□□ 2.31
LMBR1-214ENST00000461469 BCAMP50895 628 aa29.49■■■□□ 2.31
LMBR1-214ENST00000461469 AIDAQ96BJ3 306 aa29.49■■■□□ 2.31
LMBR1-214ENST00000461469 SIL1Q9H173 461 aa29.49■■■□□ 2.31
LMBR1-214ENST00000461469 PA2G4Q9UQ80 394 aaKnown RBP29.49■■■□□ 2.31
LMBR1-214ENST00000461469 MAP2K2P36507 400 aa29.48■■■□□ 2.31
LMBR1-214ENST00000461469 LBX1P52954 281 aa29.48■■■□□ 2.31
LMBR1-214ENST00000461469 CFAP100Q494V2 611 aa29.48■■■□□ 2.31
LMBR1-214ENST00000461469 MFSD14BQ5SR56 506 aa29.48■■■□□ 2.31
LMBR1-214ENST00000461469 RGMBQ6NW40 437 aa29.48■■■□□ 2.31
LMBR1-214ENST00000461469 ATF7IPQ6VMQ6 1270 aa29.48■■■□□ 2.31
LMBR1-214ENST00000461469 MTMR14Q8NCE2 650 aa29.48■■■□□ 2.31
LMBR1-214ENST00000461469 CLUAP1Q96AJ1 413 aa29.48■■■□□ 2.31
LMBR1-214ENST00000461469 CTCFP49711 727 aaPredicted RBP29.47■■■□□ 2.31
LMBR1-214ENST00000461469 DLGAP5Q15398 846 aa29.47■■■□□ 2.31
LMBR1-214ENST00000461469 PRMT6Q96LA8 375 aaPredicted RBP29.47■■■□□ 2.31
LMBR1-214ENST00000461469 MYH13Q9UKX3 1938 aa29.46■■■□□ 2.31
LMBR1-214ENST00000461469 PUM3Q15397 648 aaKnown RBP29.46■■■□□ 2.31
LMBR1-214ENST00000461469 SPDYE2BA6NHP3 402 aa29.45■■■□□ 2.31
LMBR1-214ENST00000461469 SPDYE6P0CI01 402 aa29.45■■■□□ 2.31
LMBR1-214ENST00000461469 TSKSQ9UJT2 592 aa29.45■■■□□ 2.31
LMBR1-214ENST00000461469 ZBED9Q6R2W3 1325 aa29.45■■■□□ 2.3
LMBR1-214ENST00000461469 CHAF1AQ13111 956 aaPredicted RBP29.44■■■□□ 2.3
LMBR1-214ENST00000461469 COL1A1P02452 1464 aaPredicted RBP29.43■■■□□ 2.3
LMBR1-214ENST00000461469 CLRN2A0PK11 232 aa29.43■■■□□ 2.3
LMBR1-214ENST00000461469 IPO8O15397 1037 aaKnown RBP29.43■■■□□ 2.3
LMBR1-214ENST00000461469 ZNF157P51786 506 aaPredicted RBP29.43■■■□□ 2.3
LMBR1-214ENST00000461469 TNS4Q8IZW8 715 aa29.43■■■□□ 2.3
LMBR1-214ENST00000461469 PRDM10Q9NQV6 1147 aa29.43■■■□□ 2.3
LMBR1-214ENST00000461469 CIAO1O76071 339 aa29.42■■■□□ 2.3
LMBR1-214ENST00000461469 CAVIN4Q5BKX8 364 aa29.42■■■□□ 2.3
LMBR1-214ENST00000461469 VPS37DQ86XT2 251 aa29.42■■■□□ 2.3
LMBR1-214ENST00000461469 APOBEC3FQ8IUX4 373 aaKnown RBP29.42■■■□□ 2.3
LMBR1-214ENST00000461469 TMEM57Q8N5G2 664 aa29.42■■■□□ 2.3
LMBR1-214ENST00000461469 TTF2Q9UNY4 1162 aaKnown RBP29.42■■■□□ 2.3
LMBR1-214ENST00000461469 FZD1Q9UP38 647 aa29.42■■■□□ 2.3
LMBR1-214ENST00000461469 SSC5DA1L4H1 1573 aa29.42■■■□□ 2.3
LMBR1-214ENST00000461469 UBE2Q2LH0YL09 131 aa29.41■■■□□ 2.3
LMBR1-214ENST00000461469 SLC10A3P09131 477 aa29.41■■■□□ 2.3
LMBR1-214ENST00000461469 IFIT1P09914 478 aaKnown RBP29.41■■■□□ 2.3
LMBR1-214ENST00000461469 NOGQ13253 232 aa29.41■■■□□ 2.3
LMBR1-214ENST00000461469 COPRSQ9NQ92 184 aa29.41■■■□□ 2.3
LMBR1-214ENST00000461469 GNAI3P08754 354 aa29.4■■■□□ 2.3
LMBR1-214ENST00000461469 RASAL3Q86YV0 1011 aa29.4■■■□□ 2.3
LMBR1-214ENST00000461469 FBXO3Q9UK99 471 aa29.4■■■□□ 2.3
LMBR1-214ENST00000461469 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.4■■■□□ 2.3
LMBR1-214ENST00000461469 FKBP1BP68106 108 aa29.39■■■□□ 2.3
LMBR1-214ENST00000461469 MTX1Q13505 466 aa29.39■■■□□ 2.3
LMBR1-214ENST00000461469 ZKSCAN2Q63HK3 967 aa29.39■■■□□ 2.3
LMBR1-214ENST00000461469 LPIN2Q92539 896 aa29.39■■■□□ 2.3
LMBR1-214ENST00000461469 DEFB129Q9H1M3 183 aa29.39■■■□□ 2.3
LMBR1-214ENST00000461469 SLC5A1P13866 664 aa29.38■■■□□ 2.29
LMBR1-214ENST00000461469 RBM5P52756 815 aaKnown RBP eCLIP29.38■■■□□ 2.29
LMBR1-214ENST00000461469 KIF23Q02241 960 aaPredicted RBP29.38■■■□□ 2.29
LMBR1-214ENST00000461469 CCDC102AQ96A19 550 aa29.38■■■□□ 2.29
LMBR1-214ENST00000461469 SRGAP3O43295 1099 aa29.37■■■□□ 2.29
LMBR1-214ENST00000461469 PRKG1Q13976 671 aa29.37■■■□□ 2.29
LMBR1-214ENST00000461469 ATP2B3Q16720 1220 aa29.37■■■□□ 2.29
LMBR1-214ENST00000461469 SERPINA10Q9UK55 444 aa29.37■■■□□ 2.29
LMBR1-214ENST00000461469 HDAC5Q9UQL6 1122 aa29.37■■■□□ 2.29
LMBR1-214ENST00000461469 RLBP1P12271 317 aa29.36■■■□□ 2.29
LMBR1-214ENST00000461469 IL15P40933 162 aaPredicted RBP29.36■■■□□ 2.29
LMBR1-214ENST00000461469 CRKP46108 304 aa29.36■■■□□ 2.29
LMBR1-214ENST00000461469 TDRD3Q9H7E2 651 aaKnown RBP29.36■■■□□ 2.29
LMBR1-214ENST00000461469 VEZTQ9HBM0 779 aa29.36■■■□□ 2.29
LMBR1-214ENST00000461469 CEP126Q9P2H0 1117 aa29.36■■■□□ 2.29
LMBR1-214ENST00000461469 PNMA6EA0A0J9YXQ4 647 aa29.35■■■□□ 2.29
LMBR1-214ENST00000461469 FRAT2O75474 233 aaPredicted RBP29.35■■■□□ 2.29
LMBR1-214ENST00000461469 ADORA1P30542 326 aa29.35■■■□□ 2.29
LMBR1-214ENST00000461469 DZIP1LQ8IYY4 767 aaKnown RBP29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 230 ms