RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 A0A1B0GUL6 1792 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 RASSF10A6NK89 507 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 CIAO1O76071 339 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
SYN3-206ENST00000461446 SCARF1Q14162 830 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 DEFB115Q30KQ5 88 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 C15orf52Q6ZUT6 534 aaKnown RBP12.59□□□□□ -0.39
SYN3-206ENST00000461446 ATG9AQ7Z3C6 839 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 EXOC6Q8TAG9 804 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 SIL1Q9H173 461 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 MYOZ2Q9NPC6 264 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 GGA3Q9NZ52 723 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 SCAF8Q9UPN6 1271 aaKnown RBP12.59□□□□□ -0.39
SYN3-206ENST00000461446 JAG2Q9Y219 1238 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 ZNF609O15014 1411 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 MROH5Q6ZUA9 1318 aa12.59□□□□□ -0.39
SYN3-206ENST00000461446 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
SYN3-206ENST00000461446 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
SYN3-206ENST00000461446 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
SYN3-206ENST00000461446 GYG1P46976 350 aa12.58□□□□□ -0.4
SYN3-206ENST00000461446 KIAA0825Q8IV33 1275 aa12.58□□□□□ -0.4
SYN3-206ENST00000461446 DCPSQ96C86 337 aaKnown RBP12.58□□□□□ -0.4
SYN3-206ENST00000461446 TRPM7Q96QT4 1865 aa12.58□□□□□ -0.4
SYN3-206ENST00000461446 PCDHB15Q9Y5E8 787 aa12.58□□□□□ -0.4
SYN3-206ENST00000461446 ZNF646O15015 1829 aaPredicted RBP12.58□□□□□ -0.4
SYN3-206ENST00000461446 HMMRO75330 724 aa12.57□□□□□ -0.4
SYN3-206ENST00000461446 SURF6O75683 361 aaKnown RBP12.57□□□□□ -0.4
SYN3-206ENST00000461446 IL1R1P14778 569 aa12.57□□□□□ -0.4
SYN3-206ENST00000461446 GRM1Q13255 1194 aa12.57□□□□□ -0.4
SYN3-206ENST00000461446 G3BP1Q13283 466 aaKnown RBP eCLIP12.57□□□□□ -0.4
SYN3-206ENST00000461446 NBPF9Q3BBW0 867 aa12.57□□□□□ -0.4
SYN3-206ENST00000461446 METTL24Q5JXM2 366 aa12.57□□□□□ -0.4
SYN3-206ENST00000461446 ANGEL2Q5VTE6 544 aaKnown RBP12.57□□□□□ -0.4
SYN3-206ENST00000461446 PAXIP1Q6ZW49 1069 aaPredicted RBP12.57□□□□□ -0.4
SYN3-206ENST00000461446 ZNF804AQ7Z570 1209 aa12.57□□□□□ -0.4
SYN3-206ENST00000461446 CERS5Q8N5B7 392 aa12.57□□□□□ -0.4
SYN3-206ENST00000461446 VGLL2Q8N8G2 317 aa12.57□□□□□ -0.4
SYN3-206ENST00000461446 NOP58Q9Y2X3 529 aaKnown RBP12.57□□□□□ -0.4
SYN3-206ENST00000461446 TLL2Q9Y6L7 1015 aa12.57□□□□□ -0.4
SYN3-206ENST00000461446 PDE8BO95263 885 aa12.56□□□□□ -0.4
SYN3-206ENST00000461446 UBE4AQ14139 1066 aa12.56□□□□□ -0.4
SYN3-206ENST00000461446 CYP4F22Q6NT55 531 aa12.56□□□□□ -0.4
SYN3-206ENST00000461446 SAPCD2Q86UD0 394 aa12.56□□□□□ -0.4
SYN3-206ENST00000461446 SULF1Q8IWU6 871 aa12.56□□□□□ -0.4
SYN3-206ENST00000461446 OGFOD1Q8N543 542 aa12.56□□□□□ -0.4
SYN3-206ENST00000461446 FAM84BQ96KN1 310 aaPredicted RBP12.56□□□□□ -0.4
SYN3-206ENST00000461446 CEP126Q9P2H0 1117 aa12.56□□□□□ -0.4
SYN3-206ENST00000461446 WDR33Q9C0J8 1336 aaKnown RBP12.56□□□□□ -0.4
SYN3-206ENST00000461446 F8W031 263 aaPredicted RBP12.55□□□□□ -0.4
SYN3-206ENST00000461446 WNT10BO00744 389 aa12.55□□□□□ -0.4
SYN3-206ENST00000461446 SASH1O94885 1247 aa12.55□□□□□ -0.4
SYN3-206ENST00000461446 HIBADHP31937 336 aaKnown RBP12.55□□□□□ -0.4
SYN3-206ENST00000461446 CAPNS2Q96L46 248 aa12.55□□□□□ -0.4
SYN3-206ENST00000461446 MYO3BQ8WXR4 1341 aa12.55□□□□□ -0.4
SYN3-206ENST00000461446 FGFR2P21802 821 aa12.54□□□□□ -0.4
SYN3-206ENST00000461446 HSP90AB4PQ58FF6 505 aa12.54□□□□□ -0.4
SYN3-206ENST00000461446 PRAMEF18Q5VWM3 479 aa12.54□□□□□ -0.4
SYN3-206ENST00000461446 TDRD7Q8NHU6 1098 aaKnown RBP12.54□□□□□ -0.4
SYN3-206ENST00000461446 CDCA5Q96FF9 252 aa12.54□□□□□ -0.4
SYN3-206ENST00000461446 IQSEC3Q9UPP2 1182 aaPredicted RBP12.54□□□□□ -0.4
SYN3-206ENST00000461446 PCDHAC2Q9Y5I4 1007 aa12.54□□□□□ -0.4
SYN3-206ENST00000461446 AOC2O75106 756 aa12.53□□□□□ -0.4
SYN3-206ENST00000461446 TFCP2Q12800 502 aa12.53□□□□□ -0.4
SYN3-206ENST00000461446 OS9Q13438 667 aaPredicted RBP12.53□□□□□ -0.4
SYN3-206ENST00000461446 PUM3Q15397 648 aaKnown RBP12.53□□□□□ -0.4
SYN3-206ENST00000461446 FBXO33Q7Z6M2 555 aa12.53□□□□□ -0.4
SYN3-206ENST00000461446 GBA2Q9HCG7 927 aaPredicted RBP12.53□□□□□ -0.4
SYN3-206ENST00000461446 HDAC9Q9UKV0 1011 aa12.53□□□□□ -0.4
SYN3-206ENST00000461446 EXOC6BQ9Y2D4 811 aa12.53□□□□□ -0.4
SYN3-206ENST00000461446 ECE1P42892 770 aa12.52□□□□□ -0.41
SYN3-206ENST00000461446 BCAMP50895 628 aa12.52□□□□□ -0.41
SYN3-206ENST00000461446 HUNKP57058 714 aa12.52□□□□□ -0.41
SYN3-206ENST00000461446 HDAC1Q13547 482 aaPredicted RBP12.52□□□□□ -0.41
SYN3-206ENST00000461446 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
SYN3-206ENST00000461446 VPS37DQ86XT2 251 aa12.52□□□□□ -0.41
SYN3-206ENST00000461446 ERC1Q8IUD2 1116 aa12.52□□□□□ -0.41
SYN3-206ENST00000461446 LPIN2Q92539 896 aa12.52□□□□□ -0.41
SYN3-206ENST00000461446 ZBED3Q96IU2 234 aaPredicted RBP12.52□□□□□ -0.41
SYN3-206ENST00000461446 DCTPP1Q9H773 170 aa12.52□□□□□ -0.41
SYN3-206ENST00000461446 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.52□□□□□ -0.41
SYN3-206ENST00000461446 FAM205AQ6ZU69 1335 aa12.52□□□□□ -0.41
SYN3-206ENST00000461446 FOXN1O15353 648 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 RAB11FIP3O75154 756 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 IFIT1P09914 478 aaKnown RBP12.51□□□□□ -0.41
SYN3-206ENST00000461446 TIMM10P62072 90 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 CHAF1AQ13111 956 aaPredicted RBP12.51□□□□□ -0.41
SYN3-206ENST00000461446 DLGAP5Q15398 846 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 GRIK5Q16478 980 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 ATP2B3Q16720 1220 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 MFSD14BQ5SR56 506 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 C2orf69Q8N8R5 385 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 GPR108Q9NPR9 543 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 WBP1LQ9NX94 342 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 AKAP2Q9Y2D5 859 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 AOX1Q06278 1338 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 PITPNM2Q9BZ72 1349 aa12.51□□□□□ -0.41
SYN3-206ENST00000461446 A0A1B0GUL7 405 aa12.5□□□□□ -0.41
SYN3-206ENST00000461446 SLC5A1P13866 664 aa12.5□□□□□ -0.41
SYN3-206ENST00000461446 FKBP1AP62942 108 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms