RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 COL1A1P02452 1464 aaPredicted RBP18.64■□□□□ 0.57
SMPD4-216ENST00000461187 LDHAL6AQ6ZMR3 332 aa18.63■□□□□ 0.57
SMPD4-216ENST00000461187 ZNF804AQ7Z570 1209 aa18.63■□□□□ 0.57
SMPD4-216ENST00000461187 MTMR14Q8NCE2 650 aa18.63■□□□□ 0.57
SMPD4-216ENST00000461187 ZNF521Q96K83 1311 aa18.63■□□□□ 0.57
SMPD4-216ENST00000461187 PLIN1O60240 522 aa18.62■□□□□ 0.57
SMPD4-216ENST00000461187 FKBP1AP62942 108 aaKnown RBP18.62■□□□□ 0.57
SMPD4-216ENST00000461187 MLLT1Q03111 559 aaPredicted RBP18.62■□□□□ 0.57
SMPD4-216ENST00000461187 PTPN12Q05209 780 aaKnown RBP18.62■□□□□ 0.57
SMPD4-216ENST00000461187 DLGAP5Q15398 846 aa18.62■□□□□ 0.57
SMPD4-216ENST00000461187 TAF7LQ5H9L4 462 aa18.62■□□□□ 0.57
SMPD4-216ENST00000461187 SLC4A10Q6U841 1118 aa18.62■□□□□ 0.57
SMPD4-216ENST00000461187 SRCIN1Q9C0H9 1055 aa18.62■□□□□ 0.57
SMPD4-216ENST00000461187 CNNM1Q9NRU3 951 aa18.62■□□□□ 0.57
SMPD4-216ENST00000461187 PCDHAC2Q9Y5I4 1007 aa18.62■□□□□ 0.57
SMPD4-216ENST00000461187 TM4SF4P48230 202 aa18.61■□□□□ 0.57
SMPD4-216ENST00000461187 PRKG1Q13976 671 aa18.61■□□□□ 0.57
SMPD4-216ENST00000461187 ARMC9Q7Z3E5 817 aa18.61■□□□□ 0.57
SMPD4-216ENST00000461187 KAZALD1Q96I82 304 aa18.61■□□□□ 0.57
SMPD4-216ENST00000461187 F8W031 263 aaPredicted RBP18.6■□□□□ 0.57
SMPD4-216ENST00000461187 LDLRAD1Q5T700 205 aa18.6■□□□□ 0.57
SMPD4-216ENST00000461187 SUCLG2Q96I99 432 aa18.6■□□□□ 0.57
SMPD4-216ENST00000461187 DEFB129Q9H1M3 183 aa18.6■□□□□ 0.57
SMPD4-216ENST00000461187 SSC5DA1L4H1 1573 aa18.59■□□□□ 0.57
SMPD4-216ENST00000461187 UTYO14607 1347 aa18.59■□□□□ 0.57
SMPD4-216ENST00000461187 NBPF7P0C2Y1 421 aaPredicted RBP18.59■□□□□ 0.57
SMPD4-216ENST00000461187 MKRN3Q13064 507 aaKnown RBP18.59■□□□□ 0.57
SMPD4-216ENST00000461187 CFAP100Q494V2 611 aa18.59■□□□□ 0.57
SMPD4-216ENST00000461187 CTU1Q7Z7A3 348 aaKnown RBP18.59■□□□□ 0.57
SMPD4-216ENST00000461187 ANGEL1Q9UNK9 670 aaKnown RBP18.59■□□□□ 0.57
SMPD4-216ENST00000461187 FZD1Q9UP38 647 aa18.59■□□□□ 0.57
SMPD4-216ENST00000461187 JAG2Q9Y219 1238 aa18.59■□□□□ 0.57
SMPD4-216ENST00000461187 AOX1Q06278 1338 aa18.58■□□□□ 0.57
SMPD4-216ENST00000461187 FAM205AQ6ZU69 1335 aa18.58■□□□□ 0.57
SMPD4-216ENST00000461187 SPDYE2BA6NHP3 402 aa18.58■□□□□ 0.56
SMPD4-216ENST00000461187 TBC1D8O95759 1140 aa18.58■□□□□ 0.56
SMPD4-216ENST00000461187 SPDYE6P0CI01 402 aa18.58■□□□□ 0.56
SMPD4-216ENST00000461187 UBE4AQ14139 1066 aa18.58■□□□□ 0.56
SMPD4-216ENST00000461187 PRMT6Q96LA8 375 aaPredicted RBP18.58■□□□□ 0.56
SMPD4-216ENST00000461187 PUS3Q9BZE2 481 aaKnown RBP18.58■□□□□ 0.56
SMPD4-216ENST00000461187 MAP3K11Q16584 847 aa18.57■□□□□ 0.56
SMPD4-216ENST00000461187 TDRD7Q8NHU6 1098 aaKnown RBP18.57■□□□□ 0.56
SMPD4-216ENST00000461187 PPP2R3BQ9Y5P8 575 aa18.57■□□□□ 0.56
SMPD4-216ENST00000461187 CLRN2A0PK11 232 aa18.56■□□□□ 0.56
SMPD4-216ENST00000461187 MYO1BO43795 1136 aa18.56■□□□□ 0.56
SMPD4-216ENST00000461187 GYG1P46976 350 aa18.56■□□□□ 0.56
SMPD4-216ENST00000461187 SREBF2Q12772 1141 aa18.56■□□□□ 0.56
SMPD4-216ENST00000461187 SPRYD7Q5W111 196 aa18.56■□□□□ 0.56
SMPD4-216ENST00000461187 MRPL50Q8N5N7 158 aaKnown RBP18.56■□□□□ 0.56
SMPD4-216ENST00000461187 ZNF296Q8WUU4 475 aaPredicted RBP18.56■□□□□ 0.56
SMPD4-216ENST00000461187 FAM84BQ96KN1 310 aaPredicted RBP18.56■□□□□ 0.56
SMPD4-216ENST00000461187 RIPOR2Q9Y4F9 1068 aa18.56■□□□□ 0.56
SMPD4-216ENST00000461187 AK9Q5TCS8 1911 aa18.55■□□□□ 0.56
SMPD4-216ENST00000461187 HIBADHP31937 336 aaKnown RBP18.55■□□□□ 0.56
SMPD4-216ENST00000461187 RABL6Q3YEC7 729 aaPredicted RBP18.55■□□□□ 0.56
SMPD4-216ENST00000461187 NOM1Q5C9Z4 860 aaKnown RBP18.55■□□□□ 0.56
SMPD4-216ENST00000461187 BICC1Q9H694 974 aaKnown RBP18.55■□□□□ 0.56
SMPD4-216ENST00000461187 MFSD14BQ5SR56 506 aa18.54■□□□□ 0.56
SMPD4-216ENST00000461187 CFHR5Q9BXR6 569 aa18.54■□□□□ 0.56
SMPD4-216ENST00000461187 VEZTQ9HBM0 779 aa18.54■□□□□ 0.56
SMPD4-216ENST00000461187 MROH5Q6ZUA9 1318 aa18.53■□□□□ 0.56
SMPD4-216ENST00000461187 GPR25O00155 361 aa18.53■□□□□ 0.56
SMPD4-216ENST00000461187 PPP1R12BO60237 982 aaPredicted RBP18.53■□□□□ 0.56
SMPD4-216ENST00000461187 RBM5P52756 815 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMPD4-216ENST00000461187 NBPF12Q5TAG4 269 aaPredicted RBP18.53■□□□□ 0.56
SMPD4-216ENST00000461187 ANKRD44Q8N8A2 993 aa18.53■□□□□ 0.56
SMPD4-216ENST00000461187 SLC10A4Q96EP9 437 aa18.53■□□□□ 0.56
SMPD4-216ENST00000461187 CLMNQ96JQ2 1002 aa18.53■□□□□ 0.56
SMPD4-216ENST00000461187 PTPRCP08575 1304 aa18.52■□□□□ 0.56
SMPD4-216ENST00000461187 SUPT20HL1Q3ZLR7 823 aa18.52■□□□□ 0.56
SMPD4-216ENST00000461187 LRRC24Q50LG9 513 aa18.52■□□□□ 0.56
SMPD4-216ENST00000461187 R3HDMLQ9H3Y0 253 aa18.52■□□□□ 0.56
SMPD4-216ENST00000461187 TTF2Q9UNY4 1162 aaKnown RBP18.52■□□□□ 0.56
SMPD4-216ENST00000461187 UNCXA6NJT0 531 aa18.51■□□□□ 0.55
SMPD4-216ENST00000461187 E9PSI1 815 aa18.51■□□□□ 0.55
SMPD4-216ENST00000461187 SOX10P56693 466 aa18.51■□□□□ 0.55
SMPD4-216ENST00000461187 RASA3Q14644 834 aa18.51■□□□□ 0.55
SMPD4-216ENST00000461187 PKN2Q16513 984 aaKnown RBP18.51■□□□□ 0.55
SMPD4-216ENST00000461187 SPDYE2Q495Y8 402 aa18.51■□□□□ 0.55
SMPD4-216ENST00000461187 FBXO33Q7Z6M2 555 aa18.51■□□□□ 0.55
SMPD4-216ENST00000461187 SSH1Q8WYL5 1049 aa18.51■□□□□ 0.55
SMPD4-216ENST00000461187 WNK4Q96J92 1243 aa18.51■□□□□ 0.55
SMPD4-216ENST00000461187 SERPINA10Q9UK55 444 aa18.51■□□□□ 0.55
SMPD4-216ENST00000461187 HPS5Q9UPZ3 1129 aa18.51■□□□□ 0.55
SMPD4-216ENST00000461187 MANSC4A6NHS7 340 aaPredicted RBP18.5■□□□□ 0.55
SMPD4-216ENST00000461187 USP2O75604 605 aaPredicted RBP18.5■□□□□ 0.55
SMPD4-216ENST00000461187 ZBTB48P10074 688 aaPredicted RBP18.5■□□□□ 0.55
SMPD4-216ENST00000461187 VGLL2Q8N8G2 317 aa18.5■□□□□ 0.55
SMPD4-216ENST00000461187 USP44Q9H0E7 712 aa18.5■□□□□ 0.55
SMPD4-216ENST00000461187 TDRD3Q9H7E2 651 aaKnown RBP18.5■□□□□ 0.55
SMPD4-216ENST00000461187 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.5■□□□□ 0.55
SMPD4-216ENST00000461187 ZNF70Q9UC06 446 aaPredicted RBP18.5■□□□□ 0.55
SMPD4-216ENST00000461187 ALDH1A1P00352 501 aa18.49■□□□□ 0.55
SMPD4-216ENST00000461187 IREB2P48200 963 aaKnown RBP18.49■□□□□ 0.55
SMPD4-216ENST00000461187 INHBEP58166 350 aa18.49■□□□□ 0.55
SMPD4-216ENST00000461187 SLFN5Q08AF3 891 aa18.49■□□□□ 0.55
SMPD4-216ENST00000461187 GRIK5Q16478 980 aa18.49■□□□□ 0.55
SMPD4-216ENST00000461187 METTL24Q5JXM2 366 aa18.49■□□□□ 0.55
SMPD4-216ENST00000461187 IFNL1Q8IU54 200 aa18.49■□□□□ 0.55
SMPD4-216ENST00000461187 DZIP1LQ8IYY4 767 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms