RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 C2orf69Q8N8R5 385 aa12.18□□□□□ -0.46
CD40-203ENST00000461171 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
CD40-203ENST00000461171 PUS3Q9BZE2 481 aaKnown RBP12.18□□□□□ -0.46
CD40-203ENST00000461171 USP44Q9H0E7 712 aa12.18□□□□□ -0.46
CD40-203ENST00000461171 CNNM1Q9NRU3 951 aa12.18□□□□□ -0.46
CD40-203ENST00000461171 RIPOR2Q9Y4F9 1068 aa12.18□□□□□ -0.46
CD40-203ENST00000461171 ARAP2Q8WZ64 1704 aa12.17□□□□□ -0.46
CD40-203ENST00000461171 CA12O43570 354 aa12.17□□□□□ -0.46
CD40-203ENST00000461171 FKBP1AP62942 108 aaKnown RBP12.17□□□□□ -0.46
CD40-203ENST00000461171 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
CD40-203ENST00000461171 SMC4Q9NTJ3 1288 aa12.17□□□□□ -0.46
CD40-203ENST00000461171 FAM205AQ6ZU69 1335 aa12.16□□□□□ -0.46
CD40-203ENST00000461171 MROH5Q6ZUA9 1318 aa12.16□□□□□ -0.46
CD40-203ENST00000461171 SLC10A3P09131 477 aa12.16□□□□□ -0.46
CD40-203ENST00000461171 VGLL2Q8N8G2 317 aa12.16□□□□□ -0.46
CD40-203ENST00000461171 MTMR14Q8NCE2 650 aa12.16□□□□□ -0.46
CD40-203ENST00000461171 BEGAINQ9BUH8 593 aa12.16□□□□□ -0.46
CD40-203ENST00000461171 HDAC9Q9UKV0 1011 aa12.16□□□□□ -0.46
CD40-203ENST00000461171 SCAF8Q9UPN6 1271 aaKnown RBP12.16□□□□□ -0.46
CD40-203ENST00000461171 COL1A1P02452 1464 aaPredicted RBP12.15□□□□□ -0.46
CD40-203ENST00000461171 TDRD7Q8NHU6 1098 aaKnown RBP12.15□□□□□ -0.46
CD40-203ENST00000461171 CCDC102AQ96A19 550 aa12.15□□□□□ -0.46
CD40-203ENST00000461171 FAM84BQ96KN1 310 aaPredicted RBP12.15□□□□□ -0.46
CD40-203ENST00000461171 ECM29Q5VYK3 1845 aa12.15□□□□□ -0.46
CD40-203ENST00000461171 PLIN1O60240 522 aa12.14□□□□□ -0.47
CD40-203ENST00000461171 ABCB7O75027 752 aa12.14□□□□□ -0.47
CD40-203ENST00000461171 GYG1P46976 350 aa12.14□□□□□ -0.47
CD40-203ENST00000461171 RFX5P48382 616 aaPredicted RBP12.14□□□□□ -0.47
CD40-203ENST00000461171 ZNF157P51786 506 aaPredicted RBP12.14□□□□□ -0.47
CD40-203ENST00000461171 LRRC24Q50LG9 513 aa12.14□□□□□ -0.47
CD40-203ENST00000461171 PRAMEF18Q5VWM3 479 aa12.14□□□□□ -0.47
CD40-203ENST00000461171 RASAL3Q86YV0 1011 aa12.14□□□□□ -0.47
CD40-203ENST00000461171 APOBEC3FQ8IUX4 373 aaKnown RBP12.14□□□□□ -0.47
CD40-203ENST00000461171 TSKSQ9UJT2 592 aa12.14□□□□□ -0.47
CD40-203ENST00000461171 SSC5DA1L4H1 1573 aa12.13□□□□□ -0.47
CD40-203ENST00000461171 AOX1Q06278 1338 aa12.13□□□□□ -0.47
CD40-203ENST00000461171 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
CD40-203ENST00000461171 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
CD40-203ENST00000461171 HIBADHP31937 336 aaKnown RBP12.13□□□□□ -0.47
CD40-203ENST00000461171 KIF23Q02241 960 aaPredicted RBP12.13□□□□□ -0.47
CD40-203ENST00000461171 MOB2Q70IA6 237 aa12.13□□□□□ -0.47
CD40-203ENST00000461171 FBXO33Q7Z6M2 555 aa12.13□□□□□ -0.47
CD40-203ENST00000461171 KLHDC4Q8TBB5 520 aa12.13□□□□□ -0.47
CD40-203ENST00000461171 JAG2Q9Y219 1238 aa12.13□□□□□ -0.47
CD40-203ENST00000461171 PCDHAC2Q9Y5I4 1007 aa12.13□□□□□ -0.47
CD40-203ENST00000461171 PDE8BO95263 885 aa12.12□□□□□ -0.47
CD40-203ENST00000461171 RARSP54136 660 aaKnown RBP12.12□□□□□ -0.47
CD40-203ENST00000461171 DLGAP5Q15398 846 aa12.12□□□□□ -0.47
CD40-203ENST00000461171 MFSD14BQ5SR56 506 aa12.12□□□□□ -0.47
CD40-203ENST00000461171 API5Q9BZZ5 524 aaKnown RBP12.12□□□□□ -0.47
CD40-203ENST00000461171 SAGE1Q9NXZ1 904 aa12.12□□□□□ -0.47
CD40-203ENST00000461171 NOB1Q9ULX3 412 aaKnown RBP12.12□□□□□ -0.47
CD40-203ENST00000461171 KIF16BQ96L93 1317 aa12.11□□□□□ -0.47
CD40-203ENST00000461171 F8W031 263 aaPredicted RBP12.11□□□□□ -0.47
CD40-203ENST00000461171 FGFR2P21802 821 aa12.11□□□□□ -0.47
CD40-203ENST00000461171 PTPN12Q05209 780 aaKnown RBP12.11□□□□□ -0.47
CD40-203ENST00000461171 CFAP100Q494V2 611 aa12.11□□□□□ -0.47
CD40-203ENST00000461171 METTL24Q5JXM2 366 aa12.11□□□□□ -0.47
CD40-203ENST00000461171 PRMT6Q96LA8 375 aaPredicted RBP12.11□□□□□ -0.47
CD40-203ENST00000461171 DEFB129Q9H1M3 183 aa12.11□□□□□ -0.47
CD40-203ENST00000461171 CASP8AP2Q9UKL3 1982 aa12.1□□□□□ -0.47
CD40-203ENST00000461171 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
CD40-203ENST00000461171 EYA2O00167 538 aa12.1□□□□□ -0.47
CD40-203ENST00000461171 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
CD40-203ENST00000461171 NF2P35240 595 aa12.1□□□□□ -0.47
CD40-203ENST00000461171 PUM3Q15397 648 aaKnown RBP12.1□□□□□ -0.47
CD40-203ENST00000461171 ATG9AQ7Z3C6 839 aa12.1□□□□□ -0.47
CD40-203ENST00000461171 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
CD40-203ENST00000461171 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
CD40-203ENST00000461171 SERPINA10Q9UK55 444 aa12.1□□□□□ -0.47
CD40-203ENST00000461171 PPP2R3BQ9Y5P8 575 aa12.1□□□□□ -0.47
CD40-203ENST00000461171 CLRN2A0PK11 232 aa12.09□□□□□ -0.47
CD40-203ENST00000461171 GRIK5Q16478 980 aa12.09□□□□□ -0.47
CD40-203ENST00000461171 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
CD40-203ENST00000461171 LDLRAD1Q5T700 205 aa12.09□□□□□ -0.47
CD40-203ENST00000461171 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
CD40-203ENST00000461171 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
CD40-203ENST00000461171 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
CD40-203ENST00000461171 ABHD8Q96I13 439 aa12.09□□□□□ -0.47
CD40-203ENST00000461171 RNF186Q9NXI6 227 aa12.09□□□□□ -0.47
CD40-203ENST00000461171 FBXO3Q9UK99 471 aa12.09□□□□□ -0.47
CD40-203ENST00000461171 TTF2Q9UNY4 1162 aaKnown RBP12.09□□□□□ -0.47
CD40-203ENST00000461171 AKAP11Q9UKA4 1901 aa12.09□□□□□ -0.47
CD40-203ENST00000461171 LAMB1P07942 1786 aa12.08□□□□□ -0.48
CD40-203ENST00000461171 MYO1BO43795 1136 aa12.08□□□□□ -0.48
CD40-203ENST00000461171 CIAO1O76071 339 aa12.08□□□□□ -0.48
CD40-203ENST00000461171 BCAMP50895 628 aa12.08□□□□□ -0.48
CD40-203ENST00000461171 TTLL12Q14166 644 aaPredicted RBP12.08□□□□□ -0.48
CD40-203ENST00000461171 MAP3K11Q16584 847 aa12.08□□□□□ -0.48
CD40-203ENST00000461171 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
CD40-203ENST00000461171 MEIS3Q99687 375 aa12.08□□□□□ -0.48
CD40-203ENST00000461171 IQSEC3Q9UPP2 1182 aaPredicted RBP12.08□□□□□ -0.48
CD40-203ENST00000461171 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
CD40-203ENST00000461171 IFIT1P09914 478 aaKnown RBP12.07□□□□□ -0.48
CD40-203ENST00000461171 TRIM27P14373 513 aa12.07□□□□□ -0.48
CD40-203ENST00000461171 HDLBPQ00341 1268 aaKnown RBP12.07□□□□□ -0.48
CD40-203ENST00000461171 ARMC9Q7Z3E5 817 aa12.07□□□□□ -0.48
CD40-203ENST00000461171 VPS37DQ86XT2 251 aa12.07□□□□□ -0.48
CD40-203ENST00000461171 DZIP1LQ8IYY4 767 aaKnown RBP12.07□□□□□ -0.48
CD40-203ENST00000461171 TBC1D22AQ8WUA7 517 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms