RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 GNL3LQ9NVN8 582 aaKnown RBP29.49■■■□□ 2.31
CPSF4-207ENST00000451876 GLTPD2A6NH11 291 aa29.49■■■□□ 2.31
CPSF4-207ENST00000451876 TTC39AQ5SRH9 613 aa29.49■■■□□ 2.31
CPSF4-207ENST00000451876 DACT2Q5SW24 774 aa29.49■■■□□ 2.31
CPSF4-207ENST00000451876 STRIP1Q5VSL9 837 aa29.49■■■□□ 2.31
CPSF4-207ENST00000451876 PI16Q6UXB8 463 aa29.49■■■□□ 2.31
CPSF4-207ENST00000451876 GPC2Q8N158 579 aa29.49■■■□□ 2.31
CPSF4-207ENST00000451876 CHAF1AQ13111 956 aaPredicted RBP29.48■■■□□ 2.31
CPSF4-207ENST00000451876 CHD1LQ86WJ1 897 aa29.48■■■□□ 2.31
CPSF4-207ENST00000451876 ZBTB12Q9Y330 459 aaPredicted RBP29.48■■■□□ 2.31
CPSF4-207ENST00000451876 FAM205AQ6ZU69 1335 aa29.48■■■□□ 2.31
CPSF4-207ENST00000451876 VIL1P09327 827 aaKnown RBP29.47■■■□□ 2.31
CPSF4-207ENST00000451876 MCAMP43121 646 aa29.47■■■□□ 2.31
CPSF4-207ENST00000451876 TNIP1Q15025 636 aa29.47■■■□□ 2.31
CPSF4-207ENST00000451876 DPY19L2Q6NUT2 758 aa29.47■■■□□ 2.31
CPSF4-207ENST00000451876 PPP4R2Q9NY27 417 aa29.47■■■□□ 2.31
CPSF4-207ENST00000451876 ZBTB47Q9UFB7 747 aaPredicted RBP29.47■■■□□ 2.31
CPSF4-207ENST00000451876 WDR90Q96KV7 1748 aa29.47■■■□□ 2.31
CPSF4-207ENST00000451876 MYO5AQ9Y4I1 1855 aaKnown RBP29.46■■■□□ 2.31
CPSF4-207ENST00000451876 SEMA3EO15041 775 aa29.45■■■□□ 2.31
CPSF4-207ENST00000451876 CERS5Q8N5B7 392 aa29.45■■■□□ 2.31
CPSF4-207ENST00000451876 HMG20BQ9P0W2 317 aa29.45■■■□□ 2.31
CPSF4-207ENST00000451876 SALL3Q9BXA9 1300 aa29.45■■■□□ 2.31
CPSF4-207ENST00000451876 UQCRFS1P1P0C7P4 283 aa29.45■■■□□ 2.3
CPSF4-207ENST00000451876 TSHZ3Q63HK5 1081 aa29.45■■■□□ 2.3
CPSF4-207ENST00000451876 RSBN1LQ6PCB5 846 aaPredicted RBP29.45■■■□□ 2.3
CPSF4-207ENST00000451876 CENPQQ7L2Z9 268 aaPredicted RBP29.45■■■□□ 2.3
CPSF4-207ENST00000451876 ZNF512BQ96KM6 892 aaPredicted RBP29.45■■■□□ 2.3
CPSF4-207ENST00000451876 DENND2AQ9ULE3 1009 aa29.45■■■□□ 2.3
CPSF4-207ENST00000451876 ZBTB22O15209 634 aa29.44■■■□□ 2.3
CPSF4-207ENST00000451876 GMPSP49915 693 aaPredicted RBP29.43■■■□□ 2.3
CPSF4-207ENST00000451876 SPATA5Q8NB90 893 aa29.43■■■□□ 2.3
CPSF4-207ENST00000451876 ZNF526Q8TF50 670 aaPredicted RBP29.43■■■□□ 2.3
CPSF4-207ENST00000451876 SNRKQ9NRH2 765 aa29.43■■■□□ 2.3
CPSF4-207ENST00000451876 SCNN1DP51172 638 aa29.42■■■□□ 2.3
CPSF4-207ENST00000451876 MFSD14BQ5SR56 506 aa29.42■■■□□ 2.3
CPSF4-207ENST00000451876 NDUFB9Q9Y6M9 179 aa29.42■■■□□ 2.3
CPSF4-207ENST00000451876 SCN4AP35499 1836 aa29.42■■■□□ 2.3
CPSF4-207ENST00000451876 YY1P25490 414 aa29.42■■■□□ 2.3
CPSF4-207ENST00000451876 PDS5AQ29RF7 1337 aaKnown RBP29.42■■■□□ 2.3
CPSF4-207ENST00000451876 GMLQ99445 158 aa29.41■■■□□ 2.3
CPSF4-207ENST00000451876 ECHDC1Q9NTX5 307 aa29.41■■■□□ 2.3
CPSF4-207ENST00000451876 ADAMTSL1Q8N6G6 1762 aa29.4■■■□□ 2.3
CPSF4-207ENST00000451876 SHTN1A0MZ66 631 aa29.4■■■□□ 2.3
CPSF4-207ENST00000451876 MX1P20591 662 aa29.4■■■□□ 2.3
CPSF4-207ENST00000451876 GRIK5Q16478 980 aa29.4■■■□□ 2.3
CPSF4-207ENST00000451876 L3MBTL3Q96JM7 780 aaPredicted RBP29.4■■■□□ 2.3
CPSF4-207ENST00000451876 DOCK2Q92608 1830 aa29.39■■■□□ 2.3
CPSF4-207ENST00000451876 WDR66Q8TBY9 1149 aa29.39■■■□□ 2.3
CPSF4-207ENST00000451876 MYO3BQ8WXR4 1341 aa29.38■■■□□ 2.29
CPSF4-207ENST00000451876 ATP5JP18859 108 aa29.38■■■□□ 2.29
CPSF4-207ENST00000451876 PDE4AP27815 886 aa29.38■■■□□ 2.29
CPSF4-207ENST00000451876 ZAP70P43403 619 aa29.38■■■□□ 2.29
CPSF4-207ENST00000451876 FKBP1AP62942 108 aaKnown RBP29.38■■■□□ 2.29
CPSF4-207ENST00000451876 AGBL3Q8NEM8 1001 aa29.38■■■□□ 2.29
CPSF4-207ENST00000451876 RPS12P25398 132 aaKnown RBP29.38■■■□□ 2.29
CPSF4-207ENST00000451876 KIAA0825Q8IV33 1275 aa29.38■■■□□ 2.29
CPSF4-207ENST00000451876 TBC1D22AQ8WUA7 517 aa29.38■■■□□ 2.29
CPSF4-207ENST00000451876 BOLA2Q9H3K6 86 aa29.38■■■□□ 2.29
CPSF4-207ENST00000451876 TTC41PQ6P2S7 1318 aa29.37■■■□□ 2.29
CPSF4-207ENST00000451876 SALL1Q9NSC2 1324 aa29.37■■■□□ 2.29
CPSF4-207ENST00000451876 POTECB2RU33 542 aa29.37■■■□□ 2.29
CPSF4-207ENST00000451876 TBC1D9Q6ZT07 1266 aa29.37■■■□□ 2.29
CPSF4-207ENST00000451876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.37■■■□□ 2.29
CPSF4-207ENST00000451876 DPF2Q92785 391 aa29.37■■■□□ 2.29
CPSF4-207ENST00000451876 GPATCH3Q96I76 525 aa29.37■■■□□ 2.29
CPSF4-207ENST00000451876 GPRC5DQ9NZD1 345 aa29.37■■■□□ 2.29
CPSF4-207ENST00000451876 F8W031 263 aaPredicted RBP29.36■■■□□ 2.29
CPSF4-207ENST00000451876 CYP2E1P05181 493 aaPredicted RBP29.36■■■□□ 2.29
CPSF4-207ENST00000451876 PRDX5P30044 214 aa29.36■■■□□ 2.29
CPSF4-207ENST00000451876 PI4K2BQ8TCG2 481 aa29.36■■■□□ 2.29
CPSF4-207ENST00000451876 PDE1AP54750 535 aa29.35■■■□□ 2.29
CPSF4-207ENST00000451876 NMRK2Q9NPI5 230 aa29.35■■■□□ 2.29
CPSF4-207ENST00000451876 MAST2Q6P0Q8 1798 aa29.35■■■□□ 2.29
CPSF4-207ENST00000451876 EPS15P42566 896 aa29.34■■■□□ 2.29
CPSF4-207ENST00000451876 SKAP1Q86WV1 359 aa29.34■■■□□ 2.29
CPSF4-207ENST00000451876 MICALL2Q8IY33 904 aa29.34■■■□□ 2.29
CPSF4-207ENST00000451876 DNAJC2Q99543 621 aaKnown RBP29.34■■■□□ 2.29
CPSF4-207ENST00000451876 ANTXR1Q9H6X2 564 aa29.34■■■□□ 2.29
CPSF4-207ENST00000451876 ABCF2Q9UG63 623 aa29.34■■■□□ 2.29
CPSF4-207ENST00000451876 PLEKHM2Q8IWE5 1019 aa29.34■■■□□ 2.29
CPSF4-207ENST00000451876 EDC3Q96F86 508 aaKnown RBP29.34■■■□□ 2.29
CPSF4-207ENST00000451876 STAP2Q9UGK3 403 aa29.34■■■□□ 2.29
CPSF4-207ENST00000451876 CNOT7Q9UIV1 285 aaKnown RBP29.34■■■□□ 2.29
CPSF4-207ENST00000451876 USP17L8P0C7I0 530 aa29.33■■■□□ 2.29
CPSF4-207ENST00000451876 HAUS7Q99871 368 aa29.32■■■□□ 2.28
CPSF4-207ENST00000451876 RRAGCQ9HB90 399 aa29.32■■■□□ 2.28
CPSF4-207ENST00000451876 MYH2Q9UKX2 1941 aa29.32■■■□□ 2.28
CPSF4-207ENST00000451876 LMOD1P29536 600 aaPredicted RBP29.31■■■□□ 2.28
CPSF4-207ENST00000451876 PIH1D3Q9NQM4 214 aaKnown RBP29.31■■■□□ 2.28
CPSF4-207ENST00000451876 HACL1Q9UJ83 578 aa29.31■■■□□ 2.28
CPSF4-207ENST00000451876 TTF2Q9UNY4 1162 aaKnown RBP29.31■■■□□ 2.28
CPSF4-207ENST00000451876 EGFRP00533 1210 aa29.31■■■□□ 2.28
CPSF4-207ENST00000451876 ZGPATQ8N5A5 531 aaKnown RBP29.31■■■□□ 2.28
CPSF4-207ENST00000451876 MYH7P12883 1935 aa29.3■■■□□ 2.28
CPSF4-207ENST00000451876 GOLIM4O00461 696 aa29.3■■■□□ 2.28
CPSF4-207ENST00000451876 ERC2O15083 957 aa29.3■■■□□ 2.28
CPSF4-207ENST00000451876 ZNF280AP59817 542 aaPredicted RBP29.3■■■□□ 2.28
CPSF4-207ENST00000451876 GPBP1L1Q9HC44 474 aaPredicted RBP29.3■■■□□ 2.28
CPSF4-207ENST00000451876 IQCA1LA6NCM1 817 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 236.1 ms