RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 IL1R1P14778 569 aa35.78■■■■□ 3.32
CBX4-202ENST00000448310 NF2P35240 595 aa35.78■■■■□ 3.32
CBX4-202ENST00000448310 APOBEC3FQ8IUX4 373 aaKnown RBP35.78■■■■□ 3.32
CBX4-202ENST00000448310 PRKG1Q13976 671 aa35.77■■■■□ 3.32
CBX4-202ENST00000448310 KAZALD1Q96I82 304 aa35.77■■■■□ 3.32
CBX4-202ENST00000448310 PCDHAC2Q9Y5I4 1007 aa35.77■■■■□ 3.32
CBX4-202ENST00000448310 NBPF7P0C2Y1 421 aaPredicted RBP35.76■■■■□ 3.32
CBX4-202ENST00000448310 DLGAP5Q15398 846 aa35.76■■■■□ 3.32
CBX4-202ENST00000448310 MRPL50Q8N5N7 158 aaKnown RBP35.74■■■■□ 3.31
CBX4-202ENST00000448310 PUS3Q9BZE2 481 aaKnown RBP35.74■■■■□ 3.31
CBX4-202ENST00000448310 REM2Q8IYK8 340 aaPredicted RBP35.73■■■■□ 3.31
CBX4-202ENST00000448310 MKRN3Q13064 507 aaKnown RBP35.72■■■■□ 3.31
CBX4-202ENST00000448310 FZD1Q9UP38 647 aa35.71■■■■□ 3.31
CBX4-202ENST00000448310 PTPN12Q05209 780 aaKnown RBP35.7■■■■□ 3.31
CBX4-202ENST00000448310 CFAP100Q494V2 611 aa35.7■■■■□ 3.31
CBX4-202ENST00000448310 MTMR14Q8NCE2 650 aa35.7■■■■□ 3.31
CBX4-202ENST00000448310 UTYO14607 1347 aa35.69■■■■□ 3.3
CBX4-202ENST00000448310 FKBP1AP62942 108 aaKnown RBP35.69■■■■□ 3.3
CBX4-202ENST00000448310 ARMC9Q7Z3E5 817 aa35.69■■■■□ 3.3
CBX4-202ENST00000448310 DEFB129Q9H1M3 183 aa35.69■■■■□ 3.3
CBX4-202ENST00000448310 BICC1Q9H694 974 aaKnown RBP35.69■■■■□ 3.3
CBX4-202ENST00000448310 COL1A1P02452 1464 aaPredicted RBP35.68■■■■□ 3.3
CBX4-202ENST00000448310 AOX1Q06278 1338 aa35.68■■■■□ 3.3
CBX4-202ENST00000448310 CLRN2A0PK11 232 aa35.68■■■■□ 3.3
CBX4-202ENST00000448310 GYG1P46976 350 aa35.68■■■■□ 3.3
CBX4-202ENST00000448310 ANGEL1Q9UNK9 670 aaKnown RBP35.68■■■■□ 3.3
CBX4-202ENST00000448310 UBE4AQ14139 1066 aa35.67■■■■□ 3.3
CBX4-202ENST00000448310 PRMT6Q96LA8 375 aaPredicted RBP35.67■■■■□ 3.3
CBX4-202ENST00000448310 SPDYE2BA6NHP3 402 aa35.66■■■■□ 3.3
CBX4-202ENST00000448310 SPDYE6P0CI01 402 aa35.66■■■■□ 3.3
CBX4-202ENST00000448310 SSH1Q8WYL5 1049 aa35.66■■■■□ 3.3
CBX4-202ENST00000448310 FAM205AQ6ZU69 1335 aa35.65■■■■□ 3.3
CBX4-202ENST00000448310 E9PSI1 815 aa35.65■■■■□ 3.3
CBX4-202ENST00000448310 ANKRD44Q8N8A2 993 aa35.65■■■■□ 3.3
CBX4-202ENST00000448310 TDRD7Q8NHU6 1098 aaKnown RBP35.65■■■■□ 3.3
CBX4-202ENST00000448310 RIPOR2Q9Y4F9 1068 aa35.65■■■■□ 3.3
CBX4-202ENST00000448310 ARAP2Q8WZ64 1704 aa35.65■■■■□ 3.3
CBX4-202ENST00000448310 SSC5DA1L4H1 1573 aa35.64■■■■□ 3.3
CBX4-202ENST00000448310 RBM5P52756 815 aaKnown RBP eCLIP35.64■■■■□ 3.3
CBX4-202ENST00000448310 RABL6Q3YEC7 729 aaPredicted RBP35.64■■■■□ 3.3
CBX4-202ENST00000448310 FAM84BQ96KN1 310 aaPredicted RBP35.64■■■■□ 3.3
CBX4-202ENST00000448310 VEZTQ9HBM0 779 aa35.64■■■■□ 3.3
CBX4-202ENST00000448310 ZBTB4Q9P1Z0 1013 aaPredicted RBP35.64■■■■□ 3.3
CBX4-202ENST00000448310 PTPRCP08575 1304 aa35.63■■■■□ 3.29
CBX4-202ENST00000448310 MYO1BO43795 1136 aa35.63■■■■□ 3.29
CBX4-202ENST00000448310 TBC1D8O95759 1140 aa35.63■■■■□ 3.29
CBX4-202ENST00000448310 HIBADHP31937 336 aaKnown RBP35.63■■■■□ 3.29
CBX4-202ENST00000448310 LDLRAD1Q5T700 205 aa35.63■■■■□ 3.29
CBX4-202ENST00000448310 LRRC24Q50LG9 513 aa35.62■■■■□ 3.29
CBX4-202ENST00000448310 MFSD14BQ5SR56 506 aa35.62■■■■□ 3.29
CBX4-202ENST00000448310 MROH5Q6ZUA9 1318 aa35.61■■■■□ 3.29
CBX4-202ENST00000448310 TM4SF4P48230 202 aa35.61■■■■□ 3.29
CBX4-202ENST00000448310 RGS19P49795 217 aa35.61■■■■□ 3.29
CBX4-202ENST00000448310 SLFN5Q08AF3 891 aa35.61■■■■□ 3.29
CBX4-202ENST00000448310 PPP2R3BQ9Y5P8 575 aa35.6■■■■□ 3.29
CBX4-202ENST00000448310 MLLT1Q03111 559 aaPredicted RBP35.59■■■■□ 3.29
CBX4-202ENST00000448310 KLHDC4Q8TBB5 520 aa35.59■■■■□ 3.29
CBX4-202ENST00000448310 CDCA7LQ96GN5 454 aa35.59■■■■□ 3.29
CBX4-202ENST00000448310 TTF2Q9UNY4 1162 aaKnown RBP35.59■■■■□ 3.29
CBX4-202ENST00000448310 METTL24Q5JXM2 366 aa35.58■■■■□ 3.29
CBX4-202ENST00000448310 SPRYD7Q5W111 196 aa35.58■■■■□ 3.29
CBX4-202ENST00000448310 CTU1Q7Z7A3 348 aaKnown RBP35.58■■■■□ 3.29
CBX4-202ENST00000448310 IQSEC3Q9UPP2 1182 aaPredicted RBP35.58■■■■□ 3.29
CBX4-202ENST00000448310 NBPF12Q5TAG4 269 aaPredicted RBP35.57■■■■□ 3.28
CBX4-202ENST00000448310 USP44Q9H0E7 712 aa35.57■■■■□ 3.28
CBX4-202ENST00000448310 SREBF2Q12772 1141 aa35.56■■■■□ 3.28
CBX4-202ENST00000448310 ZNF296Q8WUU4 475 aaPredicted RBP35.56■■■■□ 3.28
CBX4-202ENST00000448310 CLMNQ96JQ2 1002 aa35.56■■■■□ 3.28
CBX4-202ENST00000448310 PPP1R12BO60237 982 aaPredicted RBP35.55■■■■□ 3.28
CBX4-202ENST00000448310 RASA3Q14644 834 aa35.55■■■■□ 3.28
CBX4-202ENST00000448310 MAP3K11Q16584 847 aa35.55■■■■□ 3.28
CBX4-202ENST00000448310 GRIK5Q16478 980 aa35.54■■■■□ 3.28
CBX4-202ENST00000448310 SUPT20HL1Q3ZLR7 823 aa35.54■■■■□ 3.28
CBX4-202ENST00000448310 FBXO33Q7Z6M2 555 aa35.54■■■■□ 3.28
CBX4-202ENST00000448310 VPS37DQ86XT2 251 aa35.54■■■■□ 3.28
CBX4-202ENST00000448310 SLC10A4Q96EP9 437 aa35.54■■■■□ 3.28
CBX4-202ENST00000448310 CHAF1AQ13111 956 aaPredicted RBP35.53■■■■□ 3.28
CBX4-202ENST00000448310 VGLL2Q8N8G2 317 aa35.53■■■■□ 3.28
CBX4-202ENST00000448310 TDRD3Q9H7E2 651 aaKnown RBP35.53■■■■□ 3.28
CBX4-202ENST00000448310 ZNF70Q9UC06 446 aaPredicted RBP35.53■■■■□ 3.28
CBX4-202ENST00000448310 SERPINA10Q9UK55 444 aa35.53■■■■□ 3.28
CBX4-202ENST00000448310 SPDYE2Q495Y8 402 aa35.52■■■■□ 3.28
CBX4-202ENST00000448310 OTOFQ9HC10 1997 aa35.51■■■■□ 3.28
CBX4-202ENST00000448310 PDE8BO95263 885 aa35.51■■■■□ 3.28
CBX4-202ENST00000448310 R3HDMLQ9H3Y0 253 aa35.51■■■■□ 3.28
CBX4-202ENST00000448310 SMC4Q9NTJ3 1288 aa35.51■■■■□ 3.28
CBX4-202ENST00000448310 GPR25O00155 361 aa35.5■■■■□ 3.27
CBX4-202ENST00000448310 CRKP46108 304 aa35.5■■■■□ 3.27
CBX4-202ENST00000448310 ALDH1L2Q3SY69 923 aa35.5■■■■□ 3.27
CBX4-202ENST00000448310 DZIP1LQ8IYY4 767 aaKnown RBP35.5■■■■□ 3.27
CBX4-202ENST00000448310 WNK4Q96J92 1243 aa35.5■■■■□ 3.27
CBX4-202ENST00000448310 LAMB1P07942 1786 aa35.49■■■■□ 3.27
CBX4-202ENST00000448310 CAVIN4Q5BKX8 364 aa35.49■■■■□ 3.27
CBX4-202ENST00000448310 FRAT2O75474 233 aaPredicted RBP35.48■■■■□ 3.27
CBX4-202ENST00000448310 USP2O75604 605 aaPredicted RBP35.48■■■■□ 3.27
CBX4-202ENST00000448310 SOX10P56693 466 aa35.48■■■■□ 3.27
CBX4-202ENST00000448310 BCAMP50895 628 aa35.47■■■■□ 3.27
CBX4-202ENST00000448310 TNFAIP1Q13829 316 aa35.47■■■■□ 3.27
CBX4-202ENST00000448310 CDAN1Q8IWY9 1227 aa35.47■■■■□ 3.27
CBX4-202ENST00000448310 MYH13Q9UKX3 1938 aa35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms