RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 EVCP57679 992 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 FKBP15Q5T1M5 1219 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 SYT10Q6XYQ8 523 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 TBC1D31Q96DN5 1066 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 TRIM7Q9C029 511 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 BAIAP2L1Q9UHR4 511 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 MIER3Q7Z3K6 550 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 MORC4Q8TE76 937 aa10.48□□□□□ -0.73
SMC6-207ENST00000448223 EDC3Q96F86 508 aaKnown RBP10.48□□□□□ -0.73
SMC6-207ENST00000448223 CAMSAP1Q5T5Y3 1602 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 ATP5J2-PTCD1G3V325 749 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 PTCD1O75127 700 aaKnown RBP10.47□□□□□ -0.73
SMC6-207ENST00000448223 OAS2P29728 719 aaKnown RBP10.47□□□□□ -0.73
SMC6-207ENST00000448223 PPP2R3AQ06190 1150 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 TEX2Q8IWB9 1127 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 HOMER2Q9NSB8 354 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 ZDHHC9Q9Y397 364 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 MRFAP1Q9Y605 127 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 CAPN7Q9Y6W3 813 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 MYO3AQ8NEV4 1616 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 ZSCAN22P10073 491 aaPredicted RBP10.47□□□□□ -0.73
SMC6-207ENST00000448223 SLC8A1P32418 973 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 CCT2P78371 535 aaKnown RBP10.47□□□□□ -0.73
SMC6-207ENST00000448223 CTAGE9A4FU28 777 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 SOGA3Q5TF21 947 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 CACNA2D4Q7Z3S7 1137 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 RASEFQ8IZ41 740 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 PIBF1Q8WXW3 757 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 ADGRB2O60241 1585 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 SMIM24O75264 130 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 VPS36Q86VN1 386 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 TRIM22Q8IYM9 498 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.47□□□□□ -0.73
SMC6-207ENST00000448223 MROH1Q8NDA8 1641 aa10.47□□□□□ -0.73
SMC6-207ENST00000448223 RAD21O60216 631 aa10.46□□□□□ -0.73
SMC6-207ENST00000448223 GLRX3O76003 335 aaKnown RBP10.46□□□□□ -0.73
SMC6-207ENST00000448223 RHOXF2BP0C7M4 288 aa10.46□□□□□ -0.73
SMC6-207ENST00000448223 PTGS1P23219 599 aa10.46□□□□□ -0.73
SMC6-207ENST00000448223 ZKSCAN8Q15776 578 aaPredicted RBP10.46□□□□□ -0.73
SMC6-207ENST00000448223 ICE2Q659A1 982 aa10.46□□□□□ -0.73
SMC6-207ENST00000448223 RHOXF2Q9BQY4 288 aa10.46□□□□□ -0.73
SMC6-207ENST00000448223 ZC3H13Q5T200 1668 aaKnown RBP10.46□□□□□ -0.73
SMC6-207ENST00000448223 NEDD9Q14511 834 aa10.46□□□□□ -0.73
SMC6-207ENST00000448223 ELF2Q15723 593 aa10.46□□□□□ -0.73
SMC6-207ENST00000448223 TTC5Q8N0Z6 440 aa10.46□□□□□ -0.73
SMC6-207ENST00000448223 SELENOSQ9BQE4 189 aa10.46□□□□□ -0.73
SMC6-207ENST00000448223 CCDC40Q4G0X9 1142 aa10.46□□□□□ -0.74
SMC6-207ENST00000448223 ISM2Q6H9L7 571 aa10.46□□□□□ -0.74
SMC6-207ENST00000448223 PNPLA6Q8IY17 1366 aa10.46□□□□□ -0.74
SMC6-207ENST00000448223 FRMD3A2A2Y4 597 aa10.46□□□□□ -0.74
SMC6-207ENST00000448223 DDX58O95786 925 aaKnown RBP10.46□□□□□ -0.74
SMC6-207ENST00000448223 E2F4Q16254 413 aa10.46□□□□□ -0.74
SMC6-207ENST00000448223 CHST3Q7LGC8 479 aa10.46□□□□□ -0.74
SMC6-207ENST00000448223 NEK11Q8NG66 645 aa10.46□□□□□ -0.74
SMC6-207ENST00000448223 GOLGA5Q8TBA6 731 aa10.46□□□□□ -0.74
SMC6-207ENST00000448223 USP44Q9H0E7 712 aa10.46□□□□□ -0.74
SMC6-207ENST00000448223 KIDINS220Q9ULH0 1771 aa10.46□□□□□ -0.74
SMC6-207ENST00000448223 COL3A1P02461 1466 aaPredicted RBP10.45□□□□□ -0.74
SMC6-207ENST00000448223 CCDC96Q2M329 555 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 SPTY2D1Q68D10 685 aaPredicted RBP10.45□□□□□ -0.74
SMC6-207ENST00000448223 ABCA9Q8IUA7 1624 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 CABS1Q96KC9 395 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 FAM227BQ96M60 508 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 LRRD1A4D1F6 860 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 LUC7L3O95232 432 aaKnown RBP10.45□□□□□ -0.74
SMC6-207ENST00000448223 SLC3A2P08195 630 aaKnown RBP10.45□□□□□ -0.74
SMC6-207ENST00000448223 METP08581 1390 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 KIF1CO43896 1103 aaKnown RBP10.45□□□□□ -0.74
SMC6-207ENST00000448223 LARP1Q6PKG0 1096 aaKnown RBP10.45□□□□□ -0.74
SMC6-207ENST00000448223 ANAPC4Q9UJX5 808 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 PPLO60437 1756 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 GOLGA6CA6NDK9 693 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 GOLGA6DP0CG33 693 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 TDRD12Q587J7 1177 aaKnown RBP10.45□□□□□ -0.74
SMC6-207ENST00000448223 CFAP58Q5T655 872 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 CCDC110Q8TBZ0 833 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 ECHDC1Q9NTX5 307 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 IRAK4Q9NWZ3 460 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 GOLGA6AQ9NYA3 693 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 DACT1Q9NYF0 836 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 PUF60Q9UHX1 559 aaKnown RBP10.45□□□□□ -0.74
SMC6-207ENST00000448223 RBM8AQ9Y5S9 174 aaKnown RBP10.45□□□□□ -0.74
SMC6-207ENST00000448223 SNX14Q9Y5W7 946 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 MED14O60244 1454 aa10.45□□□□□ -0.74
SMC6-207ENST00000448223 PRR36Q9H6K5 1346 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 LIG3P49916 1009 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 VAV2P52735 878 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 INTS8Q75QN2 995 aaKnown RBP10.44□□□□□ -0.74
SMC6-207ENST00000448223 RAPGEF4Q8WZA2 1011 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 LMTK2Q8IWU2 1503 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 EDC4Q6P2E9 1401 aaKnown RBP10.44□□□□□ -0.74
SMC6-207ENST00000448223 CCDC69A6NI79 296 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 SEC62Q99442 399 aaKnown RBP10.44□□□□□ -0.74
SMC6-207ENST00000448223 MYD88Q99836 296 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 ODF2LQ9ULJ1 636 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 RRP15Q9Y3B9 282 aaKnown RBP10.44□□□□□ -0.74
SMC6-207ENST00000448223 SOS1Q07889 1333 aaPredicted RBP10.44□□□□□ -0.74
SMC6-207ENST00000448223 A0A087WWV3 80 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 BRD1O95696 1058 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms