RNA–Protein interactions for RNA: ENST00000447933.5

LINC01006-206, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3

Gene LINC01006, Length 766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-206ENST00000447933 NBPF9Q3BBW0 867 aa18.77■□□□□ 0.6
LINC01006-206ENST00000447933 SAPCD2Q86UD0 394 aa18.77■□□□□ 0.6
LINC01006-206ENST00000447933 CLUAP1Q96AJ1 413 aa18.77■□□□□ 0.6
LINC01006-206ENST00000447933 ZBED3Q96IU2 234 aaPredicted RBP18.77■□□□□ 0.6
LINC01006-206ENST00000447933 ZNF408Q9H9D4 720 aa18.77■□□□□ 0.6
LINC01006-206ENST00000447933 COPRSQ9NQ92 184 aa18.77■□□□□ 0.6
LINC01006-206ENST00000447933 MTX1Q13505 466 aa18.76■□□□□ 0.59
LINC01006-206ENST00000447933 PUM3Q15397 648 aaKnown RBP18.76■□□□□ 0.59
LINC01006-206ENST00000447933 TMEM57Q8N5G2 664 aa18.76■□□□□ 0.59
LINC01006-206ENST00000447933 HHIPL1Q96JK4 782 aa18.76■□□□□ 0.59
LINC01006-206ENST00000447933 WDR33Q9C0J8 1336 aaKnown RBP18.75■□□□□ 0.59
LINC01006-206ENST00000447933 CAVIN4Q5BKX8 364 aa18.75■□□□□ 0.59
LINC01006-206ENST00000447933 VPS37DQ86XT2 251 aa18.75■□□□□ 0.59
LINC01006-206ENST00000447933 MTMR14Q8NCE2 650 aa18.75■□□□□ 0.59
LINC01006-206ENST00000447933 JAG2Q9Y219 1238 aa18.75■□□□□ 0.59
LINC01006-206ENST00000447933 GNAI2P04899 355 aa18.74■□□□□ 0.59
LINC01006-206ENST00000447933 IFIT1P09914 478 aaKnown RBP18.74■□□□□ 0.59
LINC01006-206ENST00000447933 HSPA1AP0DMV8 641 aaKnown RBP18.74■□□□□ 0.59
LINC01006-206ENST00000447933 HSPA1BP0DMV9 641 aaKnown RBP18.74■□□□□ 0.59
LINC01006-206ENST00000447933 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
LINC01006-206ENST00000447933 ECE1P42892 770 aa18.74■□□□□ 0.59
LINC01006-206ENST00000447933 LPIN2Q92539 896 aa18.74■□□□□ 0.59
LINC01006-206ENST00000447933 CDCA5Q96FF9 252 aa18.74■□□□□ 0.59
LINC01006-206ENST00000447933 CAPNS2Q96L46 248 aa18.74■□□□□ 0.59
LINC01006-206ENST00000447933 SIL1Q9H173 461 aa18.74■□□□□ 0.59
LINC01006-206ENST00000447933 CEP126Q9P2H0 1117 aa18.74■□□□□ 0.59
LINC01006-206ENST00000447933 SRGAP3O43295 1099 aa18.73■□□□□ 0.59
LINC01006-206ENST00000447933 BCAMP50895 628 aa18.73■□□□□ 0.59
LINC01006-206ENST00000447933 MFSD14BQ5SR56 506 aa18.73■□□□□ 0.59
LINC01006-206ENST00000447933 CYP4F22Q6NT55 531 aa18.73■□□□□ 0.59
LINC01006-206ENST00000447933 GBA2Q9HCG7 927 aaPredicted RBP18.73■□□□□ 0.59
LINC01006-206ENST00000447933 PA2G4Q9UQ80 394 aaKnown RBP18.73■□□□□ 0.59
LINC01006-206ENST00000447933 F8W031 263 aaPredicted RBP18.72■□□□□ 0.59
LINC01006-206ENST00000447933 SLC5A1P13866 664 aa18.72■□□□□ 0.59
LINC01006-206ENST00000447933 DLGAP5Q15398 846 aa18.72■□□□□ 0.59
LINC01006-206ENST00000447933 PAXIP1Q6ZW49 1069 aaPredicted RBP18.72■□□□□ 0.59
LINC01006-206ENST00000447933 DZIP1LQ8IYY4 767 aaKnown RBP18.72■□□□□ 0.59
LINC01006-206ENST00000447933 C2orf69Q8N8R5 385 aa18.72■□□□□ 0.59
LINC01006-206ENST00000447933 HUNKP57058 714 aa18.71■□□□□ 0.59
LINC01006-206ENST00000447933 CFAP100Q494V2 611 aa18.71■□□□□ 0.59
LINC01006-206ENST00000447933 FTSJ3Q8IY81 847 aaKnown RBP18.71■□□□□ 0.59
LINC01006-206ENST00000447933 WBP1LQ9NX94 342 aa18.71■□□□□ 0.59
LINC01006-206ENST00000447933 RLBP1P12271 317 aa18.7■□□□□ 0.58
LINC01006-206ENST00000447933 ATP2B3Q16720 1220 aa18.7■□□□□ 0.58
LINC01006-206ENST00000447933 TBC1D22AQ8WUA7 517 aa18.7■□□□□ 0.58
LINC01006-206ENST00000447933 SCAF8Q9UPN6 1271 aaKnown RBP18.7■□□□□ 0.58
LINC01006-206ENST00000447933 IQSEC3Q9UPP2 1182 aaPredicted RBP18.7■□□□□ 0.58
LINC01006-206ENST00000447933 SPDYE2BA6NHP3 402 aa18.69■□□□□ 0.58
LINC01006-206ENST00000447933 FRAT2O75474 233 aaPredicted RBP18.69■□□□□ 0.58
LINC01006-206ENST00000447933 SPDYE6P0CI01 402 aa18.69■□□□□ 0.58
LINC01006-206ENST00000447933 MAP2K2P36507 400 aa18.69■□□□□ 0.58
LINC01006-206ENST00000447933 FKBP1BP68106 108 aa18.69■□□□□ 0.58
LINC01006-206ENST00000447933 CHAF1AQ13111 956 aaPredicted RBP18.69■□□□□ 0.58
LINC01006-206ENST00000447933 APOBEC3FQ8IUX4 373 aaKnown RBP18.69■□□□□ 0.58
LINC01006-206ENST00000447933 PRMT6Q96LA8 375 aaPredicted RBP18.69■□□□□ 0.58
LINC01006-206ENST00000447933 SERPINA10Q9UK55 444 aa18.69■□□□□ 0.58
LINC01006-206ENST00000447933 TTF2Q9UNY4 1162 aaKnown RBP18.69■□□□□ 0.58
LINC01006-206ENST00000447933 PCDHAC2Q9Y5I4 1007 aa18.69■□□□□ 0.58
LINC01006-206ENST00000447933 ZBTB7BO15156 539 aaPredicted RBP18.68■□□□□ 0.58
LINC01006-206ENST00000447933 MAP2K1Q02750 393 aaPredicted RBP18.68■□□□□ 0.58
LINC01006-206ENST00000447933 PNMA6EA0A0J9YXQ4 647 aa18.67■□□□□ 0.58
LINC01006-206ENST00000447933 ZBTB22O15209 634 aa18.67■□□□□ 0.58
LINC01006-206ENST00000447933 AOC2O75106 756 aa18.67■□□□□ 0.58
LINC01006-206ENST00000447933 GRM1Q13255 1194 aa18.67■□□□□ 0.58
LINC01006-206ENST00000447933 GRIK5Q16478 980 aa18.67■□□□□ 0.58
LINC01006-206ENST00000447933 PRAMEF18Q5VWM3 479 aa18.67■□□□□ 0.58
LINC01006-206ENST00000447933 RGMBQ6NW40 437 aa18.67■□□□□ 0.58
LINC01006-206ENST00000447933 MYO1BO43795 1136 aa18.66■□□□□ 0.58
LINC01006-206ENST00000447933 HDLBPQ00341 1268 aaKnown RBP18.66■□□□□ 0.58
LINC01006-206ENST00000447933 ITPRIPQ8IWB1 547 aa18.66■□□□□ 0.58
LINC01006-206ENST00000447933 AIDAQ96BJ3 306 aa18.66■□□□□ 0.58
LINC01006-206ENST00000447933 MRIQ9BWK5 157 aa18.66■□□□□ 0.58
LINC01006-206ENST00000447933 GNL3LQ9NVN8 582 aaKnown RBP18.66■□□□□ 0.58
LINC01006-206ENST00000447933 SUGT1Q9Y2Z0 365 aa18.66■□□□□ 0.58
LINC01006-206ENST00000447933 FOXN1O15353 648 aa18.65■□□□□ 0.58
LINC01006-206ENST00000447933 RBM5P52756 815 aaKnown RBP eCLIP18.65■□□□□ 0.58
LINC01006-206ENST00000447933 ATP8B2P98198 1209 aa18.65■□□□□ 0.58
LINC01006-206ENST00000447933 POLA2Q14181 598 aa18.65■□□□□ 0.58
LINC01006-206ENST00000447933 WDR66Q8TBY9 1149 aa18.65■□□□□ 0.58
LINC01006-206ENST00000447933 CCDC102AQ96A19 550 aa18.65■□□□□ 0.58
LINC01006-206ENST00000447933 DEFB129Q9H1M3 183 aa18.65■□□□□ 0.58
LINC01006-206ENST00000447933 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
LINC01006-206ENST00000447933 AOX1Q06278 1338 aa18.65■□□□□ 0.58
LINC01006-206ENST00000447933 THSD7BQ9C0I4 1608 aa18.64■□□□□ 0.57
LINC01006-206ENST00000447933 MS4A1P11836 297 aa18.64■□□□□ 0.57
LINC01006-206ENST00000447933 CRKP46108 304 aa18.64■□□□□ 0.57
LINC01006-206ENST00000447933 TFCP2Q12800 502 aa18.64■□□□□ 0.57
LINC01006-206ENST00000447933 NOGQ13253 232 aa18.64■□□□□ 0.57
LINC01006-206ENST00000447933 PANK1Q8TE04 598 aa18.64■□□□□ 0.57
LINC01006-206ENST00000447933 SSH3Q8TE77 659 aa18.64■□□□□ 0.57
LINC01006-206ENST00000447933 PPP2R3BQ9Y5P8 575 aa18.64■□□□□ 0.57
LINC01006-206ENST00000447933 COL1A1P02452 1464 aaPredicted RBP18.64■□□□□ 0.57
LINC01006-206ENST00000447933 CLRN2A0PK11 232 aa18.63■□□□□ 0.57
LINC01006-206ENST00000447933 FAM155AB1AL88 458 aaPredicted RBP18.63■□□□□ 0.57
LINC01006-206ENST00000447933 SEMA3EO15041 775 aa18.63■□□□□ 0.57
LINC01006-206ENST00000447933 ADORA1P30542 326 aa18.63■□□□□ 0.57
LINC01006-206ENST00000447933 NF2P35240 595 aa18.63■□□□□ 0.57
LINC01006-206ENST00000447933 CTCFP49711 727 aaPredicted RBP18.63■□□□□ 0.57
LINC01006-206ENST00000447933 ZNF157P51786 506 aaPredicted RBP18.63■□□□□ 0.57
LINC01006-206ENST00000447933 TIMM10P62072 90 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms