RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 APOBEC3FQ8IUX4 373 aaKnown RBP19.56■□□□□ 0.72
SEC13-213ENST00000445064 SRCIN1Q9C0H9 1055 aa19.56■□□□□ 0.72
SEC13-213ENST00000445064 JAG2Q9Y219 1238 aa19.56■□□□□ 0.72
SEC13-213ENST00000445064 PCDHAC2Q9Y5I4 1007 aa19.56■□□□□ 0.72
SEC13-213ENST00000445064 MLLT1Q03111 559 aaPredicted RBP19.55■□□□□ 0.72
SEC13-213ENST00000445064 PTPN12Q05209 780 aaKnown RBP19.55■□□□□ 0.72
SEC13-213ENST00000445064 MKRN3Q13064 507 aaKnown RBP19.55■□□□□ 0.72
SEC13-213ENST00000445064 TBC1D8O95759 1140 aa19.54■□□□□ 0.72
SEC13-213ENST00000445064 ARMC9Q7Z3E5 817 aa19.54■□□□□ 0.72
SEC13-213ENST00000445064 SUCLG2Q96I99 432 aa19.54■□□□□ 0.72
SEC13-213ENST00000445064 FZD1Q9UP38 647 aa19.54■□□□□ 0.72
SEC13-213ENST00000445064 CFAP100Q494V2 611 aa19.53■□□□□ 0.72
SEC13-213ENST00000445064 KAZALD1Q96I82 304 aa19.53■□□□□ 0.72
SEC13-213ENST00000445064 PUS3Q9BZE2 481 aaKnown RBP19.53■□□□□ 0.72
SEC13-213ENST00000445064 DEFB129Q9H1M3 183 aa19.53■□□□□ 0.72
SEC13-213ENST00000445064 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.53■□□□□ 0.72
SEC13-213ENST00000445064 ANGEL1Q9UNK9 670 aaKnown RBP19.53■□□□□ 0.72
SEC13-213ENST00000445064 A0A1B0GUL6 1792 aa19.52■□□□□ 0.72
SEC13-213ENST00000445064 NBPF7P0C2Y1 421 aaPredicted RBP19.52■□□□□ 0.72
SEC13-213ENST00000445064 TM4SF4P48230 202 aa19.52■□□□□ 0.72
SEC13-213ENST00000445064 MTMR14Q8NCE2 650 aa19.52■□□□□ 0.72
SEC13-213ENST00000445064 PRMT6Q96LA8 375 aaPredicted RBP19.52■□□□□ 0.72
SEC13-213ENST00000445064 ZNF521Q96K83 1311 aa19.51■□□□□ 0.71
SEC13-213ENST00000445064 CLRN2A0PK11 232 aa19.51■□□□□ 0.71
SEC13-213ENST00000445064 FKBP1AP62942 108 aaKnown RBP19.51■□□□□ 0.71
SEC13-213ENST00000445064 LDLRAD1Q5T700 205 aa19.51■□□□□ 0.71
SEC13-213ENST00000445064 GYG1P46976 350 aa19.5■□□□□ 0.71
SEC13-213ENST00000445064 RBM5P52756 815 aaKnown RBP eCLIP19.5■□□□□ 0.71
SEC13-213ENST00000445064 UBE4AQ14139 1066 aa19.5■□□□□ 0.71
SEC13-213ENST00000445064 MRPL50Q8N5N7 158 aaKnown RBP19.5■□□□□ 0.71
SEC13-213ENST00000445064 AOX1Q06278 1338 aa19.5■□□□□ 0.71
SEC13-213ENST00000445064 SPDYE2BA6NHP3 402 aa19.49■□□□□ 0.71
SEC13-213ENST00000445064 MYO1BO43795 1136 aa19.49■□□□□ 0.71
SEC13-213ENST00000445064 SPDYE6P0CI01 402 aa19.49■□□□□ 0.71
SEC13-213ENST00000445064 CTU1Q7Z7A3 348 aaKnown RBP19.49■□□□□ 0.71
SEC13-213ENST00000445064 TDRD7Q8NHU6 1098 aaKnown RBP19.49■□□□□ 0.71
SEC13-213ENST00000445064 FAM84BQ96KN1 310 aaPredicted RBP19.49■□□□□ 0.71
SEC13-213ENST00000445064 UTYO14607 1347 aa19.49■□□□□ 0.71
SEC13-213ENST00000445064 HIBADHP31937 336 aaKnown RBP19.48■□□□□ 0.71
SEC13-213ENST00000445064 SPRYD7Q5W111 196 aa19.48■□□□□ 0.71
SEC13-213ENST00000445064 ZNF296Q8WUU4 475 aaPredicted RBP19.48■□□□□ 0.71
SEC13-213ENST00000445064 SLC10A4Q96EP9 437 aa19.48■□□□□ 0.71
SEC13-213ENST00000445064 BICC1Q9H694 974 aaKnown RBP19.48■□□□□ 0.71
SEC13-213ENST00000445064 VEZTQ9HBM0 779 aa19.48■□□□□ 0.71
SEC13-213ENST00000445064 RIPOR2Q9Y4F9 1068 aa19.48■□□□□ 0.71
SEC13-213ENST00000445064 FAM205AQ6ZU69 1335 aa19.48■□□□□ 0.71
SEC13-213ENST00000445064 SREBF2Q12772 1141 aa19.47■□□□□ 0.71
SEC13-213ENST00000445064 PPP2R3BQ9Y5P8 575 aa19.47■□□□□ 0.71
SEC13-213ENST00000445064 PPP1R12BO60237 982 aaPredicted RBP19.46■□□□□ 0.71
SEC13-213ENST00000445064 MAP3K11Q16584 847 aa19.46■□□□□ 0.71
SEC13-213ENST00000445064 LRRC24Q50LG9 513 aa19.46■□□□□ 0.71
SEC13-213ENST00000445064 MFSD14BQ5SR56 506 aa19.46■□□□□ 0.71
SEC13-213ENST00000445064 NBPF12Q5TAG4 269 aaPredicted RBP19.46■□□□□ 0.71
SEC13-213ENST00000445064 CLMNQ96JQ2 1002 aa19.46■□□□□ 0.71
SEC13-213ENST00000445064 TTF2Q9UNY4 1162 aaKnown RBP19.46■□□□□ 0.71
SEC13-213ENST00000445064 COL1A1P02452 1464 aaPredicted RBP19.46■□□□□ 0.71
SEC13-213ENST00000445064 GPR25O00155 361 aa19.45■□□□□ 0.7
SEC13-213ENST00000445064 RABL6Q3YEC7 729 aaPredicted RBP19.45■□□□□ 0.7
SEC13-213ENST00000445064 SUPT20HL1Q3ZLR7 823 aa19.45■□□□□ 0.7
SEC13-213ENST00000445064 SSH1Q8WYL5 1049 aa19.45■□□□□ 0.7
SEC13-213ENST00000445064 R3HDMLQ9H3Y0 253 aa19.45■□□□□ 0.7
SEC13-213ENST00000445064 IQSEC3Q9UPP2 1182 aaPredicted RBP19.45■□□□□ 0.7
SEC13-213ENST00000445064 MROH5Q6ZUA9 1318 aa19.45■□□□□ 0.7
SEC13-213ENST00000445064 USP2O75604 605 aaPredicted RBP19.44■□□□□ 0.7
SEC13-213ENST00000445064 SOX10P56693 466 aa19.44■□□□□ 0.7
SEC13-213ENST00000445064 RASA3Q14644 834 aa19.44■□□□□ 0.7
SEC13-213ENST00000445064 ANKRD44Q8N8A2 993 aa19.44■□□□□ 0.7
SEC13-213ENST00000445064 TDRD3Q9H7E2 651 aaKnown RBP19.44■□□□□ 0.7
SEC13-213ENST00000445064 SSC5DA1L4H1 1573 aa19.44■□□□□ 0.7
SEC13-213ENST00000445064 ECM29Q5VYK3 1845 aa19.44■□□□□ 0.7
SEC13-213ENST00000445064 E9PSI1 815 aa19.43■□□□□ 0.7
SEC13-213ENST00000445064 METTL24Q5JXM2 366 aa19.43■□□□□ 0.7
SEC13-213ENST00000445064 FBXO33Q7Z6M2 555 aa19.43■□□□□ 0.7
SEC13-213ENST00000445064 KLHDC4Q8TBB5 520 aa19.43■□□□□ 0.7
SEC13-213ENST00000445064 USP44Q9H0E7 712 aa19.43■□□□□ 0.7
SEC13-213ENST00000445064 ZNF70Q9UC06 446 aaPredicted RBP19.43■□□□□ 0.7
SEC13-213ENST00000445064 PTPRCP08575 1304 aa19.43■□□□□ 0.7
SEC13-213ENST00000445064 SLFN5Q08AF3 891 aa19.42■□□□□ 0.7
SEC13-213ENST00000445064 GRIK5Q16478 980 aa19.42■□□□□ 0.7
SEC13-213ENST00000445064 VPS37DQ86XT2 251 aa19.42■□□□□ 0.7
SEC13-213ENST00000445064 WNK4Q96J92 1243 aa19.42■□□□□ 0.7
SEC13-213ENST00000445064 SERPINA10Q9UK55 444 aa19.42■□□□□ 0.7
SEC13-213ENST00000445064 HPS5Q9UPZ3 1129 aa19.42■□□□□ 0.7
SEC13-213ENST00000445064 MANSC4A6NHS7 340 aaPredicted RBP19.41■□□□□ 0.7
SEC13-213ENST00000445064 PDE8BO95263 885 aa19.41■□□□□ 0.7
SEC13-213ENST00000445064 INHBEP58166 350 aa19.41■□□□□ 0.7
SEC13-213ENST00000445064 CHAF1AQ13111 956 aaPredicted RBP19.41■□□□□ 0.7
SEC13-213ENST00000445064 PKN2Q16513 984 aaKnown RBP19.41■□□□□ 0.7
SEC13-213ENST00000445064 SPDYE2Q495Y8 402 aa19.41■□□□□ 0.7
SEC13-213ENST00000445064 DZIP1LQ8IYY4 767 aaKnown RBP19.41■□□□□ 0.7
SEC13-213ENST00000445064 CDCA7LQ96GN5 454 aa19.41■□□□□ 0.7
SEC13-213ENST00000445064 FKTNO75072 461 aa19.4■□□□□ 0.7
SEC13-213ENST00000445064 FRAT2O75474 233 aaPredicted RBP19.4■□□□□ 0.7
SEC13-213ENST00000445064 ZBTB48P10074 688 aaPredicted RBP19.4■□□□□ 0.7
SEC13-213ENST00000445064 CRKP46108 304 aa19.4■□□□□ 0.7
SEC13-213ENST00000445064 IREB2P48200 963 aaKnown RBP19.4■□□□□ 0.7
SEC13-213ENST00000445064 CAVIN4Q5BKX8 364 aa19.4■□□□□ 0.7
SEC13-213ENST00000445064 NOM1Q5C9Z4 860 aaKnown RBP19.4■□□□□ 0.7
SEC13-213ENST00000445064 IFNL1Q8IU54 200 aa19.4■□□□□ 0.7
SEC13-213ENST00000445064 CFHR5Q9BXR6 569 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms