RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 AACSQ86V21 672 aa17.3■□□□□ 0.36
SSBP3-208ENST00000444533 GPRC5DQ9NZD1 345 aa17.3■□□□□ 0.36
SSBP3-208ENST00000444533 CNOT7Q9UIV1 285 aaKnown RBP17.3■□□□□ 0.36
SSBP3-208ENST00000444533 ZBTB12Q9Y330 459 aaPredicted RBP17.3■□□□□ 0.36
SSBP3-208ENST00000444533 EPHX2P34913 555 aa17.29■□□□□ 0.36
SSBP3-208ENST00000444533 FKBP1AP62942 108 aaKnown RBP17.29■□□□□ 0.36
SSBP3-208ENST00000444533 HDAC1Q13547 482 aaPredicted RBP17.29■□□□□ 0.36
SSBP3-208ENST00000444533 MICALL2Q8IY33 904 aa17.29■□□□□ 0.36
SSBP3-208ENST00000444533 ZGPATQ8N5A5 531 aaKnown RBP17.29■□□□□ 0.36
SSBP3-208ENST00000444533 WDR66Q8TBY9 1149 aa17.29■□□□□ 0.36
SSBP3-208ENST00000444533 GCC1Q96CN9 775 aa17.29■□□□□ 0.36
SSBP3-208ENST00000444533 DCTPP1Q9H773 170 aa17.29■□□□□ 0.36
SSBP3-208ENST00000444533 IL1RAPL2Q9NP60 686 aa17.29■□□□□ 0.36
SSBP3-208ENST00000444533 ADARB2Q9NS39 739 aaKnown RBP17.29■□□□□ 0.36
SSBP3-208ENST00000444533 IQSEC3Q9UPP2 1182 aaPredicted RBP17.29■□□□□ 0.36
SSBP3-208ENST00000444533 WDR90Q96KV7 1748 aa17.29■□□□□ 0.36
SSBP3-208ENST00000444533 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
SSBP3-208ENST00000444533 USP17L8P0C7I0 530 aa17.28■□□□□ 0.36
SSBP3-208ENST00000444533 ADORA1P30542 326 aa17.28■□□□□ 0.36
SSBP3-208ENST00000444533 SCNN1DP51172 638 aa17.28■□□□□ 0.36
SSBP3-208ENST00000444533 EAPPQ56P03 285 aaPredicted RBP17.28■□□□□ 0.36
SSBP3-208ENST00000444533 MFSD14BQ5SR56 506 aa17.28■□□□□ 0.36
SSBP3-208ENST00000444533 DACT2Q5SW24 774 aa17.28■□□□□ 0.36
SSBP3-208ENST00000444533 GPATCH3Q96I76 525 aa17.28■□□□□ 0.36
SSBP3-208ENST00000444533 SCN4AP35499 1836 aa17.27■□□□□ 0.36
SSBP3-208ENST00000444533 PHKA1P46020 1223 aa17.27■□□□□ 0.36
SSBP3-208ENST00000444533 USP50Q70EL3 339 aaPredicted RBP17.27■□□□□ 0.36
SSBP3-208ENST00000444533 CCDC8Q9H0W5 538 aaPredicted RBP17.27■□□□□ 0.36
SSBP3-208ENST00000444533 TAF1DQ9H5J8 278 aaPredicted RBP17.27■□□□□ 0.36
SSBP3-208ENST00000444533 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
SSBP3-208ENST00000444533 MAST3O60307 1309 aa17.26■□□□□ 0.35
SSBP3-208ENST00000444533 EPS15P42566 896 aa17.26■□□□□ 0.35
SSBP3-208ENST00000444533 JAG2Q9Y219 1238 aa17.26■□□□□ 0.35
SSBP3-208ENST00000444533 SUGT1Q9Y2Z0 365 aa17.26■□□□□ 0.35
SSBP3-208ENST00000444533 TOMM70O94826 608 aa17.25■□□□□ 0.35
SSBP3-208ENST00000444533 SPTY2D1Q68D10 685 aaPredicted RBP17.25■□□□□ 0.35
SSBP3-208ENST00000444533 KIAA0825Q8IV33 1275 aa17.25■□□□□ 0.35
SSBP3-208ENST00000444533 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
SSBP3-208ENST00000444533 DBNDD2Q9BQY9 259 aa17.25■□□□□ 0.35
SSBP3-208ENST00000444533 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
SSBP3-208ENST00000444533 LDHDQ86WU2 507 aa17.24■□□□□ 0.35
SSBP3-208ENST00000444533 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
SSBP3-208ENST00000444533 ARAP2Q8WZ64 1704 aa17.24■□□□□ 0.35
SSBP3-208ENST00000444533 PDS5AQ29RF7 1337 aaKnown RBP17.23■□□□□ 0.35
SSBP3-208ENST00000444533 POTECB2RU33 542 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 F8W031 263 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-208ENST00000444533 KIF3CO14782 793 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 ZBTB22O15209 634 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 ARID4AP29374 1257 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-208ENST00000444533 RBM5P52756 815 aaKnown RBP eCLIP17.23■□□□□ 0.35
SSBP3-208ENST00000444533 RASGRF1Q13972 1273 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 KIF4BQ2VIQ3 1234 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 ANKRD45Q5TZF3 282 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 SPATA5Q8NB90 893 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 GMLQ99445 158 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 MXD3Q9BW11 206 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 MYOZ2Q9NPC6 264 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 DBNLQ9UJU6 430 aaKnown RBP17.23■□□□□ 0.35
SSBP3-208ENST00000444533 TTF2Q9UNY4 1162 aaKnown RBP17.23■□□□□ 0.35
SSBP3-208ENST00000444533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-208ENST00000444533 PSME4Q14997 1843 aa17.23■□□□□ 0.35
SSBP3-208ENST00000444533 MYO1BO43795 1136 aa17.22■□□□□ 0.35
SSBP3-208ENST00000444533 LDHBP07195 334 aaKnown RBP17.22■□□□□ 0.35
SSBP3-208ENST00000444533 ZNF280AP59817 542 aaPredicted RBP17.22■□□□□ 0.35
SSBP3-208ENST00000444533 TBC1D10BQ4KMP7 808 aaPredicted RBP17.22■□□□□ 0.35
SSBP3-208ENST00000444533 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
SSBP3-208ENST00000444533 RBM46Q8TBY0 533 aaKnown RBP17.22■□□□□ 0.35
SSBP3-208ENST00000444533 ZNF512BQ96KM6 892 aaPredicted RBP17.22■□□□□ 0.35
SSBP3-208ENST00000444533 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
SSBP3-208ENST00000444533 SMARCA5O60264 1052 aaPredicted RBP17.21■□□□□ 0.35
SSBP3-208ENST00000444533 DLGAP5Q15398 846 aa17.21■□□□□ 0.35
SSBP3-208ENST00000444533 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
SSBP3-208ENST00000444533 DZIP1Q86YF9 867 aaKnown RBP17.21■□□□□ 0.35
SSBP3-208ENST00000444533 ZC3H15Q8WU90 426 aaKnown RBP17.21■□□□□ 0.35
SSBP3-208ENST00000444533 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
SSBP3-208ENST00000444533 SALL1Q9NSC2 1324 aa17.21■□□□□ 0.34
SSBP3-208ENST00000444533 FSTL1Q12841 308 aa17.2■□□□□ 0.34
SSBP3-208ENST00000444533 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
SSBP3-208ENST00000444533 ERICH6Q7L0X2 663 aa17.2■□□□□ 0.34
SSBP3-208ENST00000444533 CERS5Q8N5B7 392 aa17.2■□□□□ 0.34
SSBP3-208ENST00000444533 TEKT1Q969V4 418 aa17.2■□□□□ 0.34
SSBP3-208ENST00000444533 DCPSQ96C86 337 aaKnown RBP17.2■□□□□ 0.34
SSBP3-208ENST00000444533 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
SSBP3-208ENST00000444533 HMG20BQ9P0W2 317 aa17.2■□□□□ 0.34
SSBP3-208ENST00000444533 LRP2BPQ9P2M1 347 aa17.2■□□□□ 0.34
SSBP3-208ENST00000444533 SERPINA10Q9UK55 444 aa17.2■□□□□ 0.34
SSBP3-208ENST00000444533 TTF1Q15361 905 aaPredicted RBP17.19■□□□□ 0.34
SSBP3-208ENST00000444533 ERC2O15083 957 aa17.18■□□□□ 0.34
SSBP3-208ENST00000444533 IGSF3O75054 1194 aa17.18■□□□□ 0.34
SSBP3-208ENST00000444533 MCAMP43121 646 aa17.18■□□□□ 0.34
SSBP3-208ENST00000444533 GSTO1P78417 241 aa17.18■□□□□ 0.34
SSBP3-208ENST00000444533 HDLBPQ00341 1268 aaKnown RBP17.18■□□□□ 0.34
SSBP3-208ENST00000444533 B4GALNT3Q6L9W6 998 aa17.18■□□□□ 0.34
SSBP3-208ENST00000444533 TRPM4Q8TD43 1214 aa17.18■□□□□ 0.34
SSBP3-208ENST00000444533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.18■□□□□ 0.34
SSBP3-208ENST00000444533 ECHDC1Q9NTX5 307 aa17.18■□□□□ 0.34
SSBP3-208ENST00000444533 RAI14Q9P0K7 980 aa17.18■□□□□ 0.34
SSBP3-208ENST00000444533 SHTN1A0MZ66 631 aa17.17■□□□□ 0.34
SSBP3-208ENST00000444533 SCARF1Q14162 830 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms