RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 UNCXA6NJT0 531 aa20.57■□□□□ 0.88
CTDSP1-204ENST00000443891 SNAP23O00161 211 aa20.57■□□□□ 0.88
CTDSP1-204ENST00000443891 TTLL12Q14166 644 aaPredicted RBP20.57■□□□□ 0.88
CTDSP1-204ENST00000443891 CERS5Q8N5B7 392 aa20.57■□□□□ 0.88
CTDSP1-204ENST00000443891 ZNF594Q96JF6 807 aaPredicted RBP20.57■□□□□ 0.88
CTDSP1-204ENST00000443891 UBE2Q2LH0YL09 131 aa20.56■□□□□ 0.88
CTDSP1-204ENST00000443891 TRPA1O75762 1119 aa20.56■□□□□ 0.88
CTDSP1-204ENST00000443891 SUCLG2Q96I99 432 aa20.56■□□□□ 0.88
CTDSP1-204ENST00000443891 NBPF7P0C2Y1 421 aaPredicted RBP20.55■□□□□ 0.88
CTDSP1-204ENST00000443891 TM4SF4P48230 202 aa20.55■□□□□ 0.88
CTDSP1-204ENST00000443891 RGS19P49795 217 aa20.55■□□□□ 0.88
CTDSP1-204ENST00000443891 DGKZQ13574 1117 aa20.55■□□□□ 0.88
CTDSP1-204ENST00000443891 ALDH1L2Q3SY69 923 aa20.55■□□□□ 0.88
CTDSP1-204ENST00000443891 TDRD7Q8NHU6 1098 aaKnown RBP20.55■□□□□ 0.88
CTDSP1-204ENST00000443891 KAZALD1Q96I82 304 aa20.55■□□□□ 0.88
CTDSP1-204ENST00000443891 DEFB129Q9H1M3 183 aa20.55■□□□□ 0.88
CTDSP1-204ENST00000443891 RIPOR2Q9Y4F9 1068 aa20.55■□□□□ 0.88
CTDSP1-204ENST00000443891 SPDYE2BA6NHP3 402 aa20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 CCDC85CA6NKD9 419 aa20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 PLIN1O60240 522 aa20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 CT47B1P0C2W7 299 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 SPDYE6P0CI01 402 aa20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 HIBADHP31937 336 aaKnown RBP20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 SLFN5Q08AF3 891 aa20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 MAP3K11Q16584 847 aa20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 NOM1Q5C9Z4 860 aaKnown RBP20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 LDLRAD1Q5T700 205 aa20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 PRAMEF18Q5VWM3 479 aa20.54■□□□□ 0.88
CTDSP1-204ENST00000443891 PPP1R12BO60237 982 aaPredicted RBP20.53■□□□□ 0.88
CTDSP1-204ENST00000443891 SREBF2Q12772 1141 aa20.53■□□□□ 0.88
CTDSP1-204ENST00000443891 SUPT20HL1Q3ZLR7 823 aa20.53■□□□□ 0.88
CTDSP1-204ENST00000443891 CFAP100Q494V2 611 aa20.53■□□□□ 0.88
CTDSP1-204ENST00000443891 SCAF8Q9UPN6 1271 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-204ENST00000443891 A0A1B0GUL6 1792 aa20.52■□□□□ 0.88
CTDSP1-204ENST00000443891 MOB2Q70IA6 237 aa20.52■□□□□ 0.88
CTDSP1-204ENST00000443891 FAM84BQ96KN1 310 aaPredicted RBP20.52■□□□□ 0.88
CTDSP1-204ENST00000443891 BICC1Q9H694 974 aaKnown RBP20.52■□□□□ 0.88
CTDSP1-204ENST00000443891 SERPINA10Q9UK55 444 aa20.52■□□□□ 0.88
CTDSP1-204ENST00000443891 AKAP11Q9UKA4 1901 aa20.51■□□□□ 0.87
CTDSP1-204ENST00000443891 INHBEP58166 350 aa20.51■□□□□ 0.87
CTDSP1-204ENST00000443891 TNFAIP1Q13829 316 aa20.51■□□□□ 0.87
CTDSP1-204ENST00000443891 MFSD14BQ5SR56 506 aa20.51■□□□□ 0.87
CTDSP1-204ENST00000443891 SSH1Q8WYL5 1049 aa20.51■□□□□ 0.87
CTDSP1-204ENST00000443891 CFHR5Q9BXR6 569 aa20.51■□□□□ 0.87
CTDSP1-204ENST00000443891 CASP8AP2Q9UKL3 1982 aa20.5■□□□□ 0.87
CTDSP1-204ENST00000443891 PTPN12Q05209 780 aaKnown RBP20.5■□□□□ 0.87
CTDSP1-204ENST00000443891 CAVIN4Q5BKX8 364 aa20.5■□□□□ 0.87
CTDSP1-204ENST00000443891 TBC1D22AQ8WUA7 517 aa20.5■□□□□ 0.87
CTDSP1-204ENST00000443891 PRMT6Q96LA8 375 aaPredicted RBP20.5■□□□□ 0.87
CTDSP1-204ENST00000443891 PUS3Q9BZE2 481 aaKnown RBP20.5■□□□□ 0.87
CTDSP1-204ENST00000443891 ANGEL1Q9UNK9 670 aaKnown RBP20.5■□□□□ 0.87
CTDSP1-204ENST00000443891 KIF16BQ96L93 1317 aa20.5■□□□□ 0.87
CTDSP1-204ENST00000443891 F8W031 263 aaPredicted RBP20.49■□□□□ 0.87
CTDSP1-204ENST00000443891 ALDH1A1P00352 501 aa20.49■□□□□ 0.87
CTDSP1-204ENST00000443891 PKN2Q16513 984 aaKnown RBP20.49■□□□□ 0.87
CTDSP1-204ENST00000443891 FBXO33Q7Z6M2 555 aa20.49■□□□□ 0.87
CTDSP1-204ENST00000443891 CTU1Q7Z7A3 348 aaKnown RBP20.49■□□□□ 0.87
CTDSP1-204ENST00000443891 VPS37DQ86XT2 251 aa20.49■□□□□ 0.87
CTDSP1-204ENST00000443891 ANKRD44Q8N8A2 993 aa20.49■□□□□ 0.87
CTDSP1-204ENST00000443891 USP44Q9H0E7 712 aa20.49■□□□□ 0.87
CTDSP1-204ENST00000443891 HDAC5Q9UQL6 1122 aa20.49■□□□□ 0.87
CTDSP1-204ENST00000443891 PDE8BO95263 885 aa20.48■□□□□ 0.87
CTDSP1-204ENST00000443891 ZBTB48P10074 688 aaPredicted RBP20.48■□□□□ 0.87
CTDSP1-204ENST00000443891 GYG1P46976 350 aa20.48■□□□□ 0.87
CTDSP1-204ENST00000443891 RBM5P52756 815 aaKnown RBP eCLIP20.48■□□□□ 0.872e-6■■□□□ 11.9
CTDSP1-204ENST00000443891 HDLBPQ00341 1268 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-204ENST00000443891 METTL24Q5JXM2 366 aa20.48■□□□□ 0.87
CTDSP1-204ENST00000443891 SPRYD7Q5W111 196 aa20.48■□□□□ 0.87
CTDSP1-204ENST00000443891 TRMT2AQ8IZ69 625 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-204ENST00000443891 SLC10A4Q96EP9 437 aa20.47■□□□□ 0.87
CTDSP1-204ENST00000443891 MRIQ9BWK5 157 aa20.47■□□□□ 0.87
CTDSP1-204ENST00000443891 TTF2Q9UNY4 1162 aaKnown RBP20.47■□□□□ 0.87
CTDSP1-204ENST00000443891 SUGT1Q9Y2Z0 365 aa20.47■□□□□ 0.87
CTDSP1-204ENST00000443891 MANSC4A6NHS7 340 aaPredicted RBP20.46■□□□□ 0.87
CTDSP1-204ENST00000443891 IREB2P48200 963 aaKnown RBP20.46■□□□□ 0.87
CTDSP1-204ENST00000443891 MLLT1Q03111 559 aaPredicted RBP20.46■□□□□ 0.87
CTDSP1-204ENST00000443891 SPDYE2Q495Y8 402 aa20.46■□□□□ 0.87
CTDSP1-204ENST00000443891 VGLL2Q8N8G2 317 aa20.46■□□□□ 0.87
CTDSP1-204ENST00000443891 VEZTQ9HBM0 779 aa20.46■□□□□ 0.87
CTDSP1-204ENST00000443891 FBXO3Q9UK99 471 aa20.46■□□□□ 0.87
CTDSP1-204ENST00000443891 CLRN2A0PK11 232 aa20.45■□□□□ 0.86
CTDSP1-204ENST00000443891 CCER2I3L3R5 266 aa20.45■□□□□ 0.86
CTDSP1-204ENST00000443891 PRKG1Q13976 671 aa20.45■□□□□ 0.86
CTDSP1-204ENST00000443891 RASA3Q14644 834 aa20.45■□□□□ 0.86
CTDSP1-204ENST00000443891 LRRC24Q50LG9 513 aa20.45■□□□□ 0.86
CTDSP1-204ENST00000443891 SMC4Q9NTJ3 1288 aa20.45■□□□□ 0.86
CTDSP1-204ENST00000443891 ECM29Q5VYK3 1845 aa20.45■□□□□ 0.86
CTDSP1-204ENST00000443891 IFIT1P09914 478 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-204ENST00000443891 TNNI2P48788 182 aa20.44■□□□□ 0.86
CTDSP1-204ENST00000443891 PUM3Q15397 648 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-204ENST00000443891 DZIP1LQ8IYY4 767 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-204ENST00000443891 ZNF70Q9UC06 446 aaPredicted RBP20.44■□□□□ 0.86
CTDSP1-204ENST00000443891 JAG2Q9Y219 1238 aa20.44■□□□□ 0.86
CTDSP1-204ENST00000443891 PCDHAC2Q9Y5I4 1007 aa20.44■□□□□ 0.86
CTDSP1-204ENST00000443891 GPR25O00155 361 aa20.43■□□□□ 0.86
CTDSP1-204ENST00000443891 FRAT2O75474 233 aaPredicted RBP20.43■□□□□ 0.86
CTDSP1-204ENST00000443891 CRKP46108 304 aa20.43■□□□□ 0.86
CTDSP1-204ENST00000443891 ANKRD13AQ8IZ07 590 aa20.43■□□□□ 0.86
CTDSP1-204ENST00000443891 MAST3O60307 1309 aa20.43■□□□□ 0.86
CTDSP1-204ENST00000443891 EYA2O00167 538 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms