RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 SMARCA5O60264 1052 aaPredicted RBP19.75■□□□□ 0.75
USP39-205ENST00000442708 RAB11FIP3O75154 756 aa19.75■□□□□ 0.75
USP39-205ENST00000442708 HDAC1Q13547 482 aaPredicted RBP19.75■□□□□ 0.75
USP39-205ENST00000442708 KIF1BPQ96EK5 621 aa19.75■□□□□ 0.75
USP39-205ENST00000442708 CCDC8Q9H0W5 538 aaPredicted RBP19.75■□□□□ 0.75
USP39-205ENST00000442708 TAF1DQ9H5J8 278 aaPredicted RBP19.75■□□□□ 0.75
USP39-205ENST00000442708 IGHDP01880 384 aa19.74■□□□□ 0.75
USP39-205ENST00000442708 CENPBP07199 599 aaPredicted RBP19.74■□□□□ 0.75
USP39-205ENST00000442708 DPF2Q92785 391 aa19.74■□□□□ 0.75
USP39-205ENST00000442708 CNOT7Q9UIV1 285 aaKnown RBP19.74■□□□□ 0.75
USP39-205ENST00000442708 HACL1Q9UJ83 578 aa19.74■□□□□ 0.75
USP39-205ENST00000442708 DBNLQ9UJU6 430 aaKnown RBP19.74■□□□□ 0.75
USP39-205ENST00000442708 ADAMTSL1Q8N6G6 1762 aa19.73■□□□□ 0.75
USP39-205ENST00000442708 AKAP11Q9UKA4 1901 aa19.73■□□□□ 0.75
USP39-205ENST00000442708 POTEIP0CG38 1075 aa19.73■□□□□ 0.75
USP39-205ENST00000442708 POTEJP0CG39 1038 aa19.73■□□□□ 0.75
USP39-205ENST00000442708 RPS12P25398 132 aaKnown RBP19.73■□□□□ 0.75
USP39-205ENST00000442708 CHAF1AQ13111 956 aaPredicted RBP19.73■□□□□ 0.75
USP39-205ENST00000442708 GRIK5Q16478 980 aa19.73■□□□□ 0.75
USP39-205ENST00000442708 AACSQ86V21 672 aa19.73■□□□□ 0.75
USP39-205ENST00000442708 MICALL2Q8IY33 904 aa19.73■□□□□ 0.75
USP39-205ENST00000442708 AGBL3Q8NEM8 1001 aa19.73■□□□□ 0.75
USP39-205ENST00000442708 IQCA1LA6NCM1 817 aa19.72■□□□□ 0.75
USP39-205ENST00000442708 EGFRP00533 1210 aa19.72■□□□□ 0.75
USP39-205ENST00000442708 EPHX2P34913 555 aa19.72■□□□□ 0.75
USP39-205ENST00000442708 RASGRF1Q13972 1273 aa19.72■□□□□ 0.75
USP39-205ENST00000442708 BCL11AQ9H165 835 aa19.72■□□□□ 0.75
USP39-205ENST00000442708 FRAT2O75474 233 aaPredicted RBP19.71■□□□□ 0.75
USP39-205ENST00000442708 LMOD1P29536 600 aaPredicted RBP19.71■□□□□ 0.75
USP39-205ENST00000442708 SCARF1Q14162 830 aa19.71■□□□□ 0.75
USP39-205ENST00000442708 PI16Q6UXB8 463 aa19.71■□□□□ 0.75
USP39-205ENST00000442708 LRRCC1Q9C099 1032 aa19.71■□□□□ 0.75
USP39-205ENST00000442708 ZBTB22O15209 634 aa19.7■□□□□ 0.74
USP39-205ENST00000442708 ARID4AP29374 1257 aaPredicted RBP19.7■□□□□ 0.74
USP39-205ENST00000442708 HIRAP54198 1017 aaPredicted RBP19.7■□□□□ 0.74
USP39-205ENST00000442708 ZNF280AP59817 542 aaPredicted RBP19.7■□□□□ 0.74
USP39-205ENST00000442708 FKBP1AP62942 108 aaKnown RBP19.7■□□□□ 0.74
USP39-205ENST00000442708 MFSD14BQ5SR56 506 aa19.7■□□□□ 0.74
USP39-205ENST00000442708 GORABQ5T7V8 394 aa19.7■□□□□ 0.74
USP39-205ENST00000442708 SAMD7Q7Z3H4 446 aa19.7■□□□□ 0.74
USP39-205ENST00000442708 TRPM4Q8TD43 1214 aa19.7■□□□□ 0.74
USP39-205ENST00000442708 KIAA0825Q8IV33 1275 aa19.69■□□□□ 0.74
USP39-205ENST00000442708 CLASRPQ8N2M8 674 aaKnown RBP19.69■□□□□ 0.74
USP39-205ENST00000442708 ADARB2Q9NS39 739 aaKnown RBP19.69■□□□□ 0.74
USP39-205ENST00000442708 GNL3LQ9NVN8 582 aaKnown RBP19.69■□□□□ 0.74
USP39-205ENST00000442708 MYO3BQ8WXR4 1341 aa19.69■□□□□ 0.74
USP39-205ENST00000442708 SEMA3EO15041 775 aa19.68■□□□□ 0.74
USP39-205ENST00000442708 USP17L8P0C7I0 530 aa19.68■□□□□ 0.74
USP39-205ENST00000442708 MCAMP43121 646 aa19.68■□□□□ 0.74
USP39-205ENST00000442708 TBC1D10BQ4KMP7 808 aaPredicted RBP19.68■□□□□ 0.74
USP39-205ENST00000442708 RWDD1Q9H446 243 aaPredicted RBP19.68■□□□□ 0.74
USP39-205ENST00000442708 HMG20BQ9P0W2 317 aa19.68■□□□□ 0.74
USP39-205ENST00000442708 DENND2AQ9ULE3 1009 aa19.68■□□□□ 0.74
USP39-205ENST00000442708 MYO5AQ9Y4I1 1855 aaKnown RBP19.68■□□□□ 0.74
USP39-205ENST00000442708 F8W031 263 aaPredicted RBP19.67■□□□□ 0.74
USP39-205ENST00000442708 H7C1D1 291 aa19.67■□□□□ 0.74
USP39-205ENST00000442708 EAPPQ56P03 285 aaPredicted RBP19.67■□□□□ 0.74
USP39-205ENST00000442708 IFIT2P09913 472 aaKnown RBP19.66■□□□□ 0.74
USP39-205ENST00000442708 UQCRFS1P1P0C7P4 283 aa19.66■□□□□ 0.74
USP39-205ENST00000442708 CCDC158Q5M9N0 1113 aa19.66■□□□□ 0.74
USP39-205ENST00000442708 TTC39AQ5SRH9 613 aa19.66■□□□□ 0.74
USP39-205ENST00000442708 RBM26Q5T8P6 1007 aaKnown RBP19.66■□□□□ 0.74
USP39-205ENST00000442708 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
USP39-205ENST00000442708 C16orf71Q8IYS4 520 aaPredicted RBP19.66■□□□□ 0.74
USP39-205ENST00000442708 SPATA5Q8NB90 893 aa19.66■□□□□ 0.74
USP39-205ENST00000442708 SNRKQ9NRH2 765 aa19.66■□□□□ 0.74
USP39-205ENST00000442708 PCDHAC2Q9Y5I4 1007 aa19.66■□□□□ 0.74
USP39-205ENST00000442708 PDS5AQ29RF7 1337 aaKnown RBP19.66■□□□□ 0.74
USP39-205ENST00000442708 USP50Q70EL3 339 aaPredicted RBP19.65■□□□□ 0.74
USP39-205ENST00000442708 WDR66Q8TBY9 1149 aa19.65■□□□□ 0.74
USP39-205ENST00000442708 TBC1D22AQ8WUA7 517 aa19.65■□□□□ 0.74
USP39-205ENST00000442708 GCC1Q96CN9 775 aa19.65■□□□□ 0.74
USP39-205ENST00000442708 ZNF512BQ96KM6 892 aaPredicted RBP19.65■□□□□ 0.74
USP39-205ENST00000442708 MYOZ2Q9NPC6 264 aa19.65■□□□□ 0.74
USP39-205ENST00000442708 ASTN2O75129 1339 aaPredicted RBP19.65■□□□□ 0.74
USP39-205ENST00000442708 SALL1Q9NSC2 1324 aa19.65■□□□□ 0.74
USP39-205ENST00000442708 POLR2AP24928 1970 aaKnown RBP19.64■□□□□ 0.74
USP39-205ENST00000442708 PRDX5P30044 214 aa19.64■□□□□ 0.73
USP39-205ENST00000442708 KIF4BQ2VIQ3 1234 aa19.64■□□□□ 0.73
USP39-205ENST00000442708 ANKRD45Q5TZF3 282 aa19.64■□□□□ 0.73
USP39-205ENST00000442708 TBC1D9Q6ZT07 1266 aa19.64■□□□□ 0.73
USP39-205ENST00000442708 PNMA8AQ86V59 439 aaPredicted RBP19.64■□□□□ 0.73
USP39-205ENST00000442708 OTUD7AQ8TE49 926 aaPredicted RBP19.64■□□□□ 0.73
USP39-205ENST00000442708 NDUFB9Q9Y6M9 179 aa19.64■□□□□ 0.73
USP39-205ENST00000442708 AOX1Q06278 1338 aa19.63■□□□□ 0.73
USP39-205ENST00000442708 TOMM70O94826 608 aa19.63■□□□□ 0.73
USP39-205ENST00000442708 ZAP70P43403 619 aa19.63■□□□□ 0.73
USP39-205ENST00000442708 ZBED3Q96IU2 234 aaPredicted RBP19.63■□□□□ 0.73
USP39-205ENST00000442708 TTF2Q9UNY4 1162 aaKnown RBP19.63■□□□□ 0.73
USP39-205ENST00000442708 HSPA6P17066 643 aa19.62■□□□□ 0.73
USP39-205ENST00000442708 LDHDQ86WU2 507 aa19.62■□□□□ 0.73
USP39-205ENST00000442708 OGFOD1Q8N543 542 aa19.62■□□□□ 0.73
USP39-205ENST00000442708 RBM46Q8TBY0 533 aaKnown RBP19.62■□□□□ 0.73
USP39-205ENST00000442708 ECM29Q5VYK3 1845 aa19.62■□□□□ 0.73
USP39-205ENST00000442708 CYP2E1P05181 493 aaPredicted RBP19.61■□□□□ 0.73
USP39-205ENST00000442708 NBPF9Q3BBW0 867 aa19.61■□□□□ 0.73
USP39-205ENST00000442708 B4GALNT3Q6L9W6 998 aa19.61■□□□□ 0.73
USP39-205ENST00000442708 PGAP2Q9UHJ9 254 aa19.61■□□□□ 0.73
USP39-205ENST00000442708 HDAC9Q9UKV0 1011 aa19.61■□□□□ 0.73
USP39-205ENST00000442708 CLEC11AQ9Y240 323 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms