RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 FRAT1Q92837 279 aaPredicted RBP17.35■□□□□ 0.37
PRAME-209ENST00000439106 GBA2Q9HCG7 927 aaPredicted RBP17.35■□□□□ 0.37
PRAME-209ENST00000439106 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
PRAME-209ENST00000439106 CASP8AP2Q9UKL3 1982 aa17.35■□□□□ 0.37
PRAME-209ENST00000439106 ECE1P42892 770 aa17.34■□□□□ 0.37
PRAME-209ENST00000439106 FAM84BQ96KN1 310 aaPredicted RBP17.34■□□□□ 0.37
PRAME-209ENST00000439106 SIL1Q9H173 461 aa17.34■□□□□ 0.37
PRAME-209ENST00000439106 WBP1LQ9NX94 342 aa17.34■□□□□ 0.37
PRAME-209ENST00000439106 AOX1Q06278 1338 aa17.33■□□□□ 0.36
PRAME-209ENST00000439106 PITPNM2Q9BZ72 1349 aa17.33■□□□□ 0.36
PRAME-209ENST00000439106 TRIM27P14373 513 aa17.33■□□□□ 0.36
PRAME-209ENST00000439106 HIBADHP31937 336 aaKnown RBP17.33■□□□□ 0.36
PRAME-209ENST00000439106 PTPN12Q05209 780 aaKnown RBP17.33■□□□□ 0.36
PRAME-209ENST00000439106 CLUAP1Q96AJ1 413 aa17.33■□□□□ 0.36
PRAME-209ENST00000439106 AIDAQ96BJ3 306 aa17.33■□□□□ 0.36
PRAME-209ENST00000439106 ZIC5Q96T25 663 aa17.33■□□□□ 0.36
PRAME-209ENST00000439106 HDAC9Q9UKV0 1011 aa17.33■□□□□ 0.36
PRAME-209ENST00000439106 EYA2O00167 538 aa17.32■□□□□ 0.36
PRAME-209ENST00000439106 IFFO2Q5TF58 517 aa17.32■□□□□ 0.36
PRAME-209ENST00000439106 MOB2Q70IA6 237 aa17.32■□□□□ 0.36
PRAME-209ENST00000439106 TDRD7Q8NHU6 1098 aaKnown RBP17.32■□□□□ 0.36
PRAME-209ENST00000439106 PA2G4Q9UQ80 394 aaKnown RBP17.32■□□□□ 0.36
PRAME-209ENST00000439106 PDE8BO95263 885 aa17.31■□□□□ 0.36
PRAME-209ENST00000439106 INTS3Q68E01 1043 aaKnown RBP17.31■□□□□ 0.36
PRAME-209ENST00000439106 ATG9AQ7Z3C6 839 aa17.31■□□□□ 0.36
PRAME-209ENST00000439106 C2orf69Q8N8R5 385 aa17.31■□□□□ 0.36
PRAME-209ENST00000439106 ARHGAP45Q92619 1136 aa17.31■□□□□ 0.36
PRAME-209ENST00000439106 ZBED3Q96IU2 234 aaPredicted RBP17.31■□□□□ 0.36
PRAME-209ENST00000439106 HHIPL1Q96JK4 782 aa17.31■□□□□ 0.36
PRAME-209ENST00000439106 TSKSQ9UJT2 592 aa17.31■□□□□ 0.36
PRAME-209ENST00000439106 OTOFQ9HC10 1997 aa17.31■□□□□ 0.36
PRAME-209ENST00000439106 FAM205AQ6ZU69 1335 aa17.3■□□□□ 0.36
PRAME-209ENST00000439106 BCAMP50895 628 aa17.3■□□□□ 0.36
PRAME-209ENST00000439106 LBX1P52954 281 aa17.3■□□□□ 0.36
PRAME-209ENST00000439106 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
PRAME-209ENST00000439106 GRIK5Q16478 980 aa17.3■□□□□ 0.36
PRAME-209ENST00000439106 MFSD14BQ5SR56 506 aa17.3■□□□□ 0.36
PRAME-209ENST00000439106 ATF7IPQ6VMQ6 1270 aa17.3■□□□□ 0.36
PRAME-209ENST00000439106 CLRN2A0PK11 232 aa17.29■□□□□ 0.36
PRAME-209ENST00000439106 HSPA8P11142 646 aaKnown RBP17.29■□□□□ 0.36
PRAME-209ENST00000439106 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
PRAME-209ENST00000439106 DLGAP5Q15398 846 aa17.29■□□□□ 0.36
PRAME-209ENST00000439106 CFAP100Q494V2 611 aa17.29■□□□□ 0.36
PRAME-209ENST00000439106 RGMBQ6NW40 437 aa17.29■□□□□ 0.36
PRAME-209ENST00000439106 FBXO33Q7Z6M2 555 aa17.29■□□□□ 0.36
PRAME-209ENST00000439106 VPS37DQ86XT2 251 aa17.29■□□□□ 0.36
PRAME-209ENST00000439106 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
PRAME-209ENST00000439106 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
PRAME-209ENST00000439106 FAM155AB1AL88 458 aaPredicted RBP17.28■□□□□ 0.36
PRAME-209ENST00000439106 FGFR2P21802 821 aa17.28■□□□□ 0.36
PRAME-209ENST00000439106 CTCFP49711 727 aaPredicted RBP17.28■□□□□ 0.36
PRAME-209ENST00000439106 ZNF157P51786 506 aaPredicted RBP17.28■□□□□ 0.36
PRAME-209ENST00000439106 RBM5P52756 815 aaKnown RBP eCLIP17.28■□□□□ 0.36
PRAME-209ENST00000439106 FKBP1AP62942 108 aaKnown RBP17.28■□□□□ 0.36
PRAME-209ENST00000439106 PRKG1Q13976 671 aa17.28■□□□□ 0.36
PRAME-209ENST00000439106 PUM3Q15397 648 aaKnown RBP17.28■□□□□ 0.36
PRAME-209ENST00000439106 TNS4Q8IZW8 715 aa17.28■□□□□ 0.36
PRAME-209ENST00000439106 PRMT6Q96LA8 375 aaPredicted RBP17.28■□□□□ 0.36
PRAME-209ENST00000439106 FZD1Q9UP38 647 aa17.28■□□□□ 0.36
PRAME-209ENST00000439106 AK9Q5TCS8 1911 aa17.27■□□□□ 0.36
PRAME-209ENST00000439106 SPDYE2BA6NHP3 402 aa17.27■□□□□ 0.36
PRAME-209ENST00000439106 IPO8O15397 1037 aaKnown RBP17.27■□□□□ 0.36
PRAME-209ENST00000439106 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.36
PRAME-209ENST00000439106 SPDYE6P0CI01 402 aa17.27■□□□□ 0.36
PRAME-209ENST00000439106 CAVIN4Q5BKX8 364 aa17.27■□□□□ 0.36
PRAME-209ENST00000439106 TMEM57Q8N5G2 664 aa17.27■□□□□ 0.36
PRAME-209ENST00000439106 TTF2Q9UNY4 1162 aaKnown RBP17.27■□□□□ 0.36
PRAME-209ENST00000439106 SSC5DA1L4H1 1573 aa17.27■□□□□ 0.35
PRAME-209ENST00000439106 MYH2Q9UKX2 1941 aa17.27■□□□□ 0.35
PRAME-209ENST00000439106 UBE2Q2LH0YL09 131 aa17.26■□□□□ 0.35
PRAME-209ENST00000439106 IFIT1P09914 478 aaKnown RBP17.26■□□□□ 0.35
PRAME-209ENST00000439106 MAP2K2P36507 400 aa17.26■□□□□ 0.35
PRAME-209ENST00000439106 TTLL12Q14166 644 aaPredicted RBP17.26■□□□□ 0.35
PRAME-209ENST00000439106 APOBEC3FQ8IUX4 373 aaKnown RBP17.26■□□□□ 0.35
PRAME-209ENST00000439106 VEZTQ9HBM0 779 aa17.26■□□□□ 0.35
PRAME-209ENST00000439106 GNAI3P08754 354 aa17.25■□□□□ 0.35
PRAME-209ENST00000439106 SLC10A3P09131 477 aa17.25■□□□□ 0.35
PRAME-209ENST00000439106 SLC5A1P13866 664 aa17.25■□□□□ 0.35
PRAME-209ENST00000439106 MMP14P50281 582 aa17.25■□□□□ 0.35
PRAME-209ENST00000439106 ZKSCAN2Q63HK3 967 aa17.25■□□□□ 0.35
PRAME-209ENST00000439106 RASAL3Q86YV0 1011 aa17.25■□□□□ 0.35
PRAME-209ENST00000439106 MTMR14Q8NCE2 650 aa17.25■□□□□ 0.35
PRAME-209ENST00000439106 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
PRAME-209ENST00000439106 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
PRAME-209ENST00000439106 CAPN15O75808 1086 aa17.24■□□□□ 0.35
PRAME-209ENST00000439106 CIAO1O76071 339 aa17.24■□□□□ 0.35
PRAME-209ENST00000439106 NOGQ13253 232 aa17.24■□□□□ 0.35
PRAME-209ENST00000439106 ATP2B3Q16720 1220 aa17.24■□□□□ 0.35
PRAME-209ENST00000439106 LPIN2Q92539 896 aa17.24■□□□□ 0.35
PRAME-209ENST00000439106 MYO5AQ9Y4I1 1855 aaKnown RBP17.23■□□□□ 0.35
PRAME-209ENST00000439106 CRKP46108 304 aa17.23■□□□□ 0.35
PRAME-209ENST00000439106 KIF23Q02241 960 aaPredicted RBP17.23■□□□□ 0.35
PRAME-209ENST00000439106 DEFB129Q9H1M3 183 aa17.23■□□□□ 0.35
PRAME-209ENST00000439106 TDRD3Q9H7E2 651 aaKnown RBP17.23■□□□□ 0.35
PRAME-209ENST00000439106 COPRSQ9NQ92 184 aa17.23■□□□□ 0.35
PRAME-209ENST00000439106 PRDM10Q9NQV6 1147 aa17.23■□□□□ 0.35
PRAME-209ENST00000439106 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
PRAME-209ENST00000439106 CEP126Q9P2H0 1117 aa17.23■□□□□ 0.35
PRAME-209ENST00000439106 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.23■□□□□ 0.35
PRAME-209ENST00000439106 LAMB1P07942 1786 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms