RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 ECE1P42892 770 aa22.87■■□□□ 1.25
HMGN1-207ENST00000436324 VPS37DQ86XT2 251 aa22.87■■□□□ 1.25
HMGN1-207ENST00000436324 VGLL2Q8N8G2 317 aa22.87■■□□□ 1.25
HMGN1-207ENST00000436324 TDRD7Q8NHU6 1098 aaKnown RBP22.87■■□□□ 1.25
HMGN1-207ENST00000436324 CDCA5Q96FF9 252 aa22.87■■□□□ 1.25
HMGN1-207ENST00000436324 IQSEC3Q9UPP2 1182 aaPredicted RBP22.87■■□□□ 1.25
HMGN1-207ENST00000436324 ZNF646O15015 1829 aaPredicted RBP22.87■■□□□ 1.25
HMGN1-207ENST00000436324 POLR2AP24928 1970 aaKnown RBP22.87■■□□□ 1.25
HMGN1-207ENST00000436324 GBA2Q9HCG7 927 aaPredicted RBP22.86■■□□□ 1.25
HMGN1-207ENST00000436324 GNAI3P08754 354 aa22.85■■□□□ 1.25
HMGN1-207ENST00000436324 HUNKP57058 714 aa22.85■■□□□ 1.25
HMGN1-207ENST00000436324 PRAMEF18Q5VWM3 479 aa22.85■■□□□ 1.25
HMGN1-207ENST00000436324 ZKSCAN2Q63HK3 967 aa22.85■■□□□ 1.25
HMGN1-207ENST00000436324 FBXO33Q7Z6M2 555 aa22.85■■□□□ 1.25
HMGN1-207ENST00000436324 C2orf69Q8N8R5 385 aa22.85■■□□□ 1.25
HMGN1-207ENST00000436324 PA2G4Q9UQ80 394 aaKnown RBP22.85■■□□□ 1.25
HMGN1-207ENST00000436324 PITPNM2Q9BZ72 1349 aa22.84■■□□□ 1.25
HMGN1-207ENST00000436324 AOC2O75106 756 aa22.84■■□□□ 1.25
HMGN1-207ENST00000436324 FRAT2O75474 233 aaPredicted RBP22.84■■□□□ 1.25
HMGN1-207ENST00000436324 BCAMP50895 628 aa22.84■■□□□ 1.25
HMGN1-207ENST00000436324 CHAF1AQ13111 956 aaPredicted RBP22.84■■□□□ 1.25
HMGN1-207ENST00000436324 DLGAP5Q15398 846 aa22.84■■□□□ 1.25
HMGN1-207ENST00000436324 CAVIN4Q5BKX8 364 aa22.84■■□□□ 1.25
HMGN1-207ENST00000436324 ATG9AQ7Z3C6 839 aa22.84■■□□□ 1.25
HMGN1-207ENST00000436324 PCDHAC2Q9Y5I4 1007 aa22.84■■□□□ 1.25
HMGN1-207ENST00000436324 IFIT1P09914 478 aaKnown RBP22.83■■□□□ 1.25
HMGN1-207ENST00000436324 MMP14P50281 582 aa22.83■■□□□ 1.25
HMGN1-207ENST00000436324 FKBP1AP62942 108 aaKnown RBP22.83■■□□□ 1.25
HMGN1-207ENST00000436324 PUM3Q15397 648 aaKnown RBP22.83■■□□□ 1.25
HMGN1-207ENST00000436324 MFSD14BQ5SR56 506 aa22.83■■□□□ 1.25
HMGN1-207ENST00000436324 TMEM57Q8N5G2 664 aa22.83■■□□□ 1.25
HMGN1-207ENST00000436324 AIDAQ96BJ3 306 aa22.83■■□□□ 1.25
HMGN1-207ENST00000436324 FAM205AQ6ZU69 1335 aa22.82■■□□□ 1.24
HMGN1-207ENST00000436324 FOXN1O15353 648 aa22.82■■□□□ 1.24
HMGN1-207ENST00000436324 RBM5P52756 815 aaKnown RBP eCLIP22.82■■□□□ 1.24
HMGN1-207ENST00000436324 CFAP100Q494V2 611 aa22.82■■□□□ 1.24
HMGN1-207ENST00000436324 COL13A1Q5TAT6 717 aaPredicted RBP22.82■■□□□ 1.24
HMGN1-207ENST00000436324 SLC5A1P13866 664 aa22.81■■□□□ 1.24
HMGN1-207ENST00000436324 FGFR2P21802 821 aa22.81■■□□□ 1.24
HMGN1-207ENST00000436324 ZBED3Q96IU2 234 aaPredicted RBP22.81■■□□□ 1.24
HMGN1-207ENST00000436324 HHIPL1Q96JK4 782 aa22.81■■□□□ 1.24
HMGN1-207ENST00000436324 WBP1LQ9NX94 342 aa22.81■■□□□ 1.24
HMGN1-207ENST00000436324 CEP126Q9P2H0 1117 aa22.81■■□□□ 1.24
HMGN1-207ENST00000436324 CIAO1O76071 339 aa22.8■■□□□ 1.24
HMGN1-207ENST00000436324 SRGAP3O43295 1099 aa22.79■■□□□ 1.24
HMGN1-207ENST00000436324 GNAI2P04899 355 aa22.79■■□□□ 1.24
HMGN1-207ENST00000436324 MAP2K1Q02750 393 aaPredicted RBP22.79■■□□□ 1.24
HMGN1-207ENST00000436324 LPIN2Q92539 896 aa22.79■■□□□ 1.24
HMGN1-207ENST00000436324 TTF2Q9UNY4 1162 aaKnown RBP22.79■■□□□ 1.24
HMGN1-207ENST00000436324 CLRN2A0PK11 232 aa22.78■■□□□ 1.24
HMGN1-207ENST00000436324 IL15P40933 162 aaPredicted RBP22.78■■□□□ 1.24
HMGN1-207ENST00000436324 GRIK5Q16478 980 aa22.78■■□□□ 1.24
HMGN1-207ENST00000436324 RGMBQ6NW40 437 aa22.78■■□□□ 1.24
HMGN1-207ENST00000436324 MOB2Q70IA6 237 aa22.78■■□□□ 1.24
HMGN1-207ENST00000436324 APOBEC3FQ8IUX4 373 aaKnown RBP22.78■■□□□ 1.24
HMGN1-207ENST00000436324 FTSJ3Q8IY81 847 aaKnown RBP22.78■■□□□ 1.24
HMGN1-207ENST00000436324 MTMR14Q8NCE2 650 aa22.78■■□□□ 1.24
HMGN1-207ENST00000436324 PRMT6Q96LA8 375 aaPredicted RBP22.78■■□□□ 1.24
HMGN1-207ENST00000436324 COPRSQ9NQ92 184 aa22.78■■□□□ 1.24
HMGN1-207ENST00000436324 FBXO3Q9UK99 471 aa22.78■■□□□ 1.24
HMGN1-207ENST00000436324 ATP2B3Q16720 1220 aa22.77■■□□□ 1.24
HMGN1-207ENST00000436324 SPDYE2BA6NHP3 402 aa22.76■■□□□ 1.23
HMGN1-207ENST00000436324 SPDYE6P0CI01 402 aa22.76■■□□□ 1.23
HMGN1-207ENST00000436324 MAP2K2P36507 400 aa22.76■■□□□ 1.23
HMGN1-207ENST00000436324 ZNF157P51786 506 aaPredicted RBP22.76■■□□□ 1.23
HMGN1-207ENST00000436324 TTLL12Q14166 644 aaPredicted RBP22.76■■□□□ 1.23
HMGN1-207ENST00000436324 DZIP1LQ8IYY4 767 aaKnown RBP22.76■■□□□ 1.23
HMGN1-207ENST00000436324 ZIC5Q96T25 663 aa22.76■■□□□ 1.23
HMGN1-207ENST00000436324 VEZTQ9HBM0 779 aa22.76■■□□□ 1.23
HMGN1-207ENST00000436324 AOX1Q06278 1338 aa22.76■■□□□ 1.23
HMGN1-207ENST00000436324 MYO1BO43795 1136 aa22.75■■□□□ 1.23
HMGN1-207ENST00000436324 RLBP1P12271 317 aa22.75■■□□□ 1.23
HMGN1-207ENST00000436324 CTCFP49711 727 aaPredicted RBP22.75■■□□□ 1.23
HMGN1-207ENST00000436324 ITPRIPQ8IWB1 547 aa22.75■■□□□ 1.23
HMGN1-207ENST00000436324 BEGAINQ9BUH8 593 aa22.75■■□□□ 1.23
HMGN1-207ENST00000436324 UBE2Q2LH0YL09 131 aa22.74■■□□□ 1.23
HMGN1-207ENST00000436324 NF2P35240 595 aa22.74■■□□□ 1.23
HMGN1-207ENST00000436324 MTX1Q13505 466 aa22.74■■□□□ 1.23
HMGN1-207ENST00000436324 PRKG1Q13976 671 aa22.74■■□□□ 1.23
HMGN1-207ENST00000436324 TBC1D22AQ8WUA7 517 aa22.74■■□□□ 1.23
HMGN1-207ENST00000436324 PNMA6EA0A0J9YXQ4 647 aa22.73■■□□□ 1.23
HMGN1-207ENST00000436324 LBX1P52954 281 aa22.73■■□□□ 1.23
HMGN1-207ENST00000436324 DEFB129Q9H1M3 183 aa22.73■■□□□ 1.23
HMGN1-207ENST00000436324 FAM155AB1AL88 458 aaPredicted RBP22.72■■□□□ 1.23
HMGN1-207ENST00000436324 ADORA1P30542 326 aa22.72■■□□□ 1.23
HMGN1-207ENST00000436324 CRKP46108 304 aa22.72■■□□□ 1.23
HMGN1-207ENST00000436324 FKBP1BP68106 108 aa22.72■■□□□ 1.23
HMGN1-207ENST00000436324 TFCP2Q12800 502 aa22.72■■□□□ 1.23
HMGN1-207ENST00000436324 NOGQ13253 232 aa22.72■■□□□ 1.23
HMGN1-207ENST00000436324 CCDC102AQ96A19 550 aa22.72■■□□□ 1.23
HMGN1-207ENST00000436324 C1orf115Q9H7X2 142 aa22.72■■□□□ 1.23
HMGN1-207ENST00000436324 SERPINA10Q9UK55 444 aa22.72■■□□□ 1.23
HMGN1-207ENST00000436324 HSPA8P11142 646 aaKnown RBP22.71■■□□□ 1.23
HMGN1-207ENST00000436324 TIMM10P62072 90 aa22.71■■□□□ 1.23
HMGN1-207ENST00000436324 TDRD3Q9H7E2 651 aaKnown RBP22.71■■□□□ 1.23
HMGN1-207ENST00000436324 TSKSQ9UJT2 592 aa22.71■■□□□ 1.23
HMGN1-207ENST00000436324 PHKA1P46020 1223 aa22.7■■□□□ 1.22
HMGN1-207ENST00000436324 IFFO2Q5TF58 517 aa22.7■■□□□ 1.22
HMGN1-207ENST00000436324 PANK1Q8TE04 598 aa22.7■■□□□ 1.22
HMGN1-207ENST00000436324 GNL3LQ9NVN8 582 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms