RNA–Protein interactions for RNA: ENST00000434068.1

C1orf228-208, Transcript of Uncharacterized protein C1orf228, human

APPRIS ALT2 TSL 3

Gene C1orf228, Length 490 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-208	ENST00000434068	RGMB	Q6NW40	437 aa		13.93	□□□□□ -0.18
C1orf228-208	ENST00000434068	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.93	□□□□□ -0.18
C1orf228-208	ENST00000434068	API5	Q9BZZ5	524 aa	Known RBP	13.93	□□□□□ -0.18
C1orf228-208	ENST00000434068	OTOF	Q9HC10	1997 aa		13.92	□□□□□ -0.18
C1orf228-208	ENST00000434068	SASH1	O94885	1247 aa		13.92	□□□□□ -0.18
C1orf228-208	ENST00000434068	CERS5	Q8N5B7	392 aa		13.92	□□□□□ -0.18
C1orf228-208	ENST00000434068	CCDC102A	Q96A19	550 aa		13.92	□□□□□ -0.18
C1orf228-208	ENST00000434068	PUS3	Q9BZE2	481 aa	Known RBP	13.92	□□□□□ -0.18
C1orf228-208	ENST00000434068	RIPOR2	Q9Y4F9	1068 aa		13.92	□□□□□ -0.18
C1orf228-208	ENST00000434068	FAM205A	Q6ZU69	1335 aa		13.91	□□□□□ -0.18
C1orf228-208	ENST00000434068	NF2	P35240	595 aa		13.91	□□□□□ -0.18
C1orf228-208	ENST00000434068	ZNF157	P51786	506 aa	Predicted RBP	13.91	□□□□□ -0.18
C1orf228-208	ENST00000434068	METTL24	Q5JXM2	366 aa		13.91	□□□□□ -0.18
C1orf228-208	ENST00000434068	MTMR14	Q8NCE2	650 aa		13.91	□□□□□ -0.18
C1orf228-208	ENST00000434068	ZBED3	Q96IU2	234 aa	Predicted RBP	13.91	□□□□□ -0.18
C1orf228-208	ENST00000434068	CASP8AP2	Q9UKL3	1982 aa		13.91	□□□□□ -0.18
C1orf228-208	ENST00000434068	FAM155A	B1AL88	458 aa	Predicted RBP	13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	SLC10A3	P09131	477 aa		13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	UBTFL1	P0CB47	393 aa	Predicted RBP	13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	HIBADH	P31937	336 aa	Known RBP	13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	GYG1	P46976	350 aa		13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	RARS	P54136	660 aa	Known RBP	13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	DLGAP5	Q15398	846 aa		13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	LRRC24	Q50LG9	513 aa		13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	TDRD7	Q8NHU6	1098 aa	Known RBP	13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	NOB1	Q9ULX3	412 aa	Known RBP	13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	HDAC5	Q9UQL6	1122 aa		13.9	□□□□□ -0.18
C1orf228-208	ENST00000434068	MYO1B	O43795	1136 aa		13.89	□□□□□ -0.19
C1orf228-208	ENST00000434068	PDE8B	O95263	885 aa		13.89	□□□□□ -0.19
C1orf228-208	ENST00000434068	VPS37D	Q86XT2	251 aa		13.89	□□□□□ -0.19
C1orf228-208	ENST00000434068	VGLL2	Q8N8G2	317 aa		13.89	□□□□□ -0.19
C1orf228-208	ENST00000434068	FAM84B	Q96KN1	310 aa	Predicted RBP	13.89	□□□□□ -0.19
C1orf228-208	ENST00000434068	SPDYE2B	A6NHP3	402 aa		13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068		F8W031	263 aa	Predicted RBP	13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	SPDYE6	P0CI01	402 aa		13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	PUM3	Q15397	648 aa	Known RBP	13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	CAVIN4	Q5BKX8	364 aa		13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	MFSD14B	Q5SR56	506 aa		13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	RASAL3	Q86YV0	1011 aa		13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	KLHDC4	Q8TBB5	520 aa		13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	ARHGAP45	Q92619	1136 aa		13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	SCAF8	Q9UPN6	1271 aa	Known RBP	13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	JAG2	Q9Y219	1238 aa		13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	PPP2R3B	Q9Y5P8	575 aa		13.88	□□□□□ -0.19
C1orf228-208	ENST00000434068	EYA2	O00167	538 aa		13.87	□□□□□ -0.19
C1orf228-208	ENST00000434068	RFX5	P48382	616 aa	Predicted RBP	13.87	□□□□□ -0.19
C1orf228-208	ENST00000434068	TTLL12	Q14166	644 aa	Predicted RBP	13.87	□□□□□ -0.19
C1orf228-208	ENST00000434068	CFAP100	Q494V2	611 aa		13.87	□□□□□ -0.19
C1orf228-208	ENST00000434068	DIEXF	Q68CQ4	756 aa	Known RBP	13.87	□□□□□ -0.19
C1orf228-208	ENST00000434068	SAGE1	Q9NXZ1	904 aa		13.87	□□□□□ -0.19
C1orf228-208	ENST00000434068	FBXO3	Q9UK99	471 aa		13.87	□□□□□ -0.19
C1orf228-208	ENST00000434068	SSC5D	A1L4H1	1573 aa		13.87	□□□□□ -0.19
C1orf228-208	ENST00000434068	NPM3	O75607	178 aa	Known RBP	13.86	□□□□□ -0.19
C1orf228-208	ENST00000434068	IFIT1	P09914	478 aa	Known RBP	13.86	□□□□□ -0.19
C1orf228-208	ENST00000434068	PTPN12	Q05209	780 aa	Known RBP	13.86	□□□□□ -0.19
C1orf228-208	ENST00000434068	PRAMEF18	Q5VWM3	479 aa		13.86	□□□□□ -0.19
C1orf228-208	ENST00000434068	FBXO33	Q7Z6M2	555 aa		13.86	□□□□□ -0.19
C1orf228-208	ENST00000434068	REM2	Q8IYK8	340 aa	Predicted RBP	13.86	□□□□□ -0.19
C1orf228-208	ENST00000434068	TBC1D22A	Q8WUA7	517 aa		13.86	□□□□□ -0.19
C1orf228-208	ENST00000434068	ZIC5	Q96T25	663 aa		13.86	□□□□□ -0.19
C1orf228-208	ENST00000434068	SERPINA10	Q9UK55	444 aa		13.86	□□□□□ -0.19
C1orf228-208	ENST00000434068	IPO8	O15397	1037 aa	Known RBP	13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	FRAT2	O75474	233 aa	Predicted RBP	13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	CAPN15	O75808	1086 aa		13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	CIAO1	O76071	339 aa		13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	SLC5A1	P13866	664 aa		13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	RBM5	P52756	815 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	KIF23	Q02241	960 aa	Predicted RBP	13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	INTS3	Q68E01	1043 aa	Known RBP	13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	ARMC9	Q7Z3E5	817 aa		13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	MIER1	Q8N108	512 aa		13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	TSKS	Q9UJT2	592 aa		13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	TTF2	Q9UNY4	1162 aa	Known RBP	13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	LRRFIP2	Q9Y608	721 aa	Known RBP	13.85	□□□□□ -0.19
C1orf228-208	ENST00000434068	GNAI3	P08754	354 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	FGFR2	P21802	821 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	TNFAIP1	Q13829	316 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	MOB2	Q70IA6	237 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	LPIN2	Q92539	896 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	MEIS3	Q99687	375 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	DEFB129	Q9H1M3	183 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	VEZT	Q9HBM0	779 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	PCDHAC2	Q9Y5I4	1007 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	MAST3	O60307	1309 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	MYH2	Q9UKX2	1941 aa		13.84	□□□□□ -0.19
C1orf228-208	ENST00000434068	CLRN2	A0PK11	232 aa		13.83	□□□□□ -0.2
C1orf228-208	ENST00000434068	UBE2Q2L	H0YL09	131 aa		13.83	□□□□□ -0.2
C1orf228-208	ENST00000434068	CHAF1A	Q13111	956 aa	Predicted RBP	13.83	□□□□□ -0.2
C1orf228-208	ENST00000434068	SPDYE2	Q495Y8	402 aa		13.83	□□□□□ -0.2
C1orf228-208	ENST00000434068	ATG9A	Q7Z3C6	839 aa		13.83	□□□□□ -0.2
C1orf228-208	ENST00000434068	PRMT6	Q96LA8	375 aa	Predicted RBP	13.83	□□□□□ -0.2
C1orf228-208	ENST00000434068	SIL1	Q9H173	461 aa		13.83	□□□□□ -0.2
C1orf228-208	ENST00000434068	DOCK2	Q92608	1830 aa		13.83	□□□□□ -0.2
C1orf228-208	ENST00000434068	TRIM27	P14373	513 aa		13.82	□□□□□ -0.2
C1orf228-208	ENST00000434068	CRK	P46108	304 aa		13.82	□□□□□ -0.2
C1orf228-208	ENST00000434068	BCAM	P50895	628 aa		13.82	□□□□□ -0.2
C1orf228-208	ENST00000434068	HDLBP	Q00341	1268 aa	Known RBP	13.82	□□□□□ -0.2
C1orf228-208	ENST00000434068	ATP2B3	Q16720	1220 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms