RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 IFIT5Q13325 482 aaKnown RBP18.09■□□□□ 0.49
SEC13-212ENST00000432213 CDAN1Q8IWY9 1227 aa18.09■□□□□ 0.49
SEC13-212ENST00000432213 ZNF296Q8WUU4 475 aaPredicted RBP18.09■□□□□ 0.49
SEC13-212ENST00000432213 SUCLG2Q96I99 432 aa18.09■□□□□ 0.49
SEC13-212ENST00000432213 CLMNQ96JQ2 1002 aa18.09■□□□□ 0.49
SEC13-212ENST00000432213 GRM8O00222 908 aa18.08■□□□□ 0.48
SEC13-212ENST00000432213 PLIN1O60240 522 aa18.08■□□□□ 0.48
SEC13-212ENST00000432213 LDLRAD1Q5T700 205 aa18.08■□□□□ 0.48
SEC13-212ENST00000432213 CTU1Q7Z7A3 348 aaKnown RBP18.08■□□□□ 0.48
SEC13-212ENST00000432213 PRMT6Q96LA8 375 aaPredicted RBP18.08■□□□□ 0.48
SEC13-212ENST00000432213 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.48
SEC13-212ENST00000432213 ANGEL1Q9UNK9 670 aaKnown RBP18.08■□□□□ 0.48
SEC13-212ENST00000432213 MYH13Q9UKX3 1938 aa18.08■□□□□ 0.48
SEC13-212ENST00000432213 COL1A1P02452 1464 aaPredicted RBP18.07■□□□□ 0.48
SEC13-212ENST00000432213 ZSWIM8A7E2V4 1837 aa18.07■□□□□ 0.48
SEC13-212ENST00000432213 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
SEC13-212ENST00000432213 TM4SF4P48230 202 aa18.07■□□□□ 0.48
SEC13-212ENST00000432213 GRIK5Q16478 980 aa18.07■□□□□ 0.48
SEC13-212ENST00000432213 CFAP100Q494V2 611 aa18.07■□□□□ 0.48
SEC13-212ENST00000432213 APOBEC3FQ8IUX4 373 aaKnown RBP18.07■□□□□ 0.48
SEC13-212ENST00000432213 DEFB129Q9H1M3 183 aa18.07■□□□□ 0.48
SEC13-212ENST00000432213 HTTP42858 3142 aa18.06■□□□□ 0.48
SEC13-212ENST00000432213 NBPF7P0C2Y1 421 aaPredicted RBP18.06■□□□□ 0.48
SEC13-212ENST00000432213 GJA5P36382 358 aa18.06■□□□□ 0.48
SEC13-212ENST00000432213 SPRYD7Q5W111 196 aa18.06■□□□□ 0.48
SEC13-212ENST00000432213 FAM9BQ8IZU0 186 aa18.06■□□□□ 0.48
SEC13-212ENST00000432213 HPS5Q9UPZ3 1129 aa18.06■□□□□ 0.48
SEC13-212ENST00000432213 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
SEC13-212ENST00000432213 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
SEC13-212ENST00000432213 GYG1P46976 350 aa18.05■□□□□ 0.48
SEC13-212ENST00000432213 DLGAP5Q15398 846 aa18.05■□□□□ 0.48
SEC13-212ENST00000432213 SLC4A10Q6U841 1118 aa18.05■□□□□ 0.48
SEC13-212ENST00000432213 MTMR14Q8NCE2 650 aa18.05■□□□□ 0.48
SEC13-212ENST00000432213 HDAC9Q9UKV0 1011 aa18.05■□□□□ 0.48
SEC13-212ENST00000432213 PDE4DIPQ5VU43 2346 aa18.04■□□□□ 0.48
SEC13-212ENST00000432213 GPR25O00155 361 aa18.04■□□□□ 0.48
SEC13-212ENST00000432213 ANP32CO43423 234 aa18.04■□□□□ 0.48
SEC13-212ENST00000432213 SLC34A2O95436 690 aa18.04■□□□□ 0.48
SEC13-212ENST00000432213 CAP1Q01518 475 aa18.04■□□□□ 0.48
SEC13-212ENST00000432213 NBPF12Q5TAG4 269 aaPredicted RBP18.04■□□□□ 0.48
SEC13-212ENST00000432213 LDHAL6AQ6ZMR3 332 aa18.04■□□□□ 0.48
SEC13-212ENST00000432213 NF2P35240 595 aa18.03■□□□□ 0.48
SEC13-212ENST00000432213 ZNF804AQ7Z570 1209 aa18.03■□□□□ 0.48
SEC13-212ENST00000432213 REM2Q8IYK8 340 aaPredicted RBP18.03■□□□□ 0.48
SEC13-212ENST00000432213 ANKRD44Q8N8A2 993 aa18.03■□□□□ 0.48
SEC13-212ENST00000432213 ZNF316A6NFI3 1004 aaPredicted RBP18.02■□□□□ 0.48
SEC13-212ENST00000432213 IGF2BP3O00425 579 aaKnown RBP eCLIP18.02■□□□□ 0.48
SEC13-212ENST00000432213 MAP3K11Q16584 847 aa18.02■□□□□ 0.48
SEC13-212ENST00000432213 CCDC57Q2TAC2 916 aa18.02■□□□□ 0.48
SEC13-212ENST00000432213 ARMC9Q7Z3E5 817 aa18.02■□□□□ 0.48
SEC13-212ENST00000432213 TDRD7Q8NHU6 1098 aaKnown RBP18.02■□□□□ 0.48
SEC13-212ENST00000432213 WNK4Q96J92 1243 aa18.02■□□□□ 0.48
SEC13-212ENST00000432213 VEZTQ9HBM0 779 aa18.02■□□□□ 0.48
SEC13-212ENST00000432213 CNNM1Q9NRU3 951 aa18.02■□□□□ 0.48
SEC13-212ENST00000432213 IQSEC3Q9UPP2 1182 aaPredicted RBP18.02■□□□□ 0.48
SEC13-212ENST00000432213 FAM205AQ6ZU69 1335 aa18.01■□□□□ 0.47
SEC13-212ENST00000432213 ALDH1L1O75891 902 aa18.01■□□□□ 0.47
SEC13-212ENST00000432213 LRRC24Q50LG9 513 aa18.01■□□□□ 0.47
SEC13-212ENST00000432213 KLHDC4Q8TBB5 520 aa18.01■□□□□ 0.47
SEC13-212ENST00000432213 FAM84BQ96KN1 310 aaPredicted RBP18.01■□□□□ 0.47
SEC13-212ENST00000432213 SRCIN1Q9C0H9 1055 aa18.01■□□□□ 0.47
SEC13-212ENST00000432213 BICC1Q9H694 974 aaKnown RBP18.01■□□□□ 0.47
SEC13-212ENST00000432213 C9orf78Q9NZ63 289 aaPredicted RBP18.01■□□□□ 0.47
SEC13-212ENST00000432213 RIPOR2Q9Y4F9 1068 aa18.01■□□□□ 0.47
SEC13-212ENST00000432213 UTYO14607 1347 aa18■□□□□ 0.47
SEC13-212ENST00000432213 FKBP1AP62942 108 aaKnown RBP18■□□□□ 0.47
SEC13-212ENST00000432213 TAF7LQ5H9L4 462 aa18■□□□□ 0.47
SEC13-212ENST00000432213 MRPL50Q8N5N7 158 aaKnown RBP18■□□□□ 0.47
SEC13-212ENST00000432213 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
SEC13-212ENST00000432213 RBBP6Q7Z6E9 1792 aaKnown RBP17.99■□□□□ 0.47
SEC13-212ENST00000432213 USP2O75604 605 aaPredicted RBP17.99■□□□□ 0.47
SEC13-212ENST00000432213 MMP14P50281 582 aa17.99■□□□□ 0.47
SEC13-212ENST00000432213 RASA3Q14644 834 aa17.99■□□□□ 0.47
SEC13-212ENST00000432213 MFSD14BQ5SR56 506 aa17.99■□□□□ 0.47
SEC13-212ENST00000432213 IFNL1Q8IU54 200 aa17.99■□□□□ 0.47
SEC13-212ENST00000432213 VGLL2Q8N8G2 317 aa17.99■□□□□ 0.47
SEC13-212ENST00000432213 TEPSINQ96N21 525 aa17.99■□□□□ 0.47
SEC13-212ENST00000432213 CFHR5Q9BXR6 569 aa17.99■□□□□ 0.47
SEC13-212ENST00000432213 TDRD3Q9H7E2 651 aaKnown RBP17.99■□□□□ 0.47
SEC13-212ENST00000432213 ZNF70Q9UC06 446 aaPredicted RBP17.99■□□□□ 0.47
SEC13-212ENST00000432213 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.47
SEC13-212ENST00000432213 RABL6Q3YEC7 729 aaPredicted RBP17.98■□□□□ 0.47
SEC13-212ENST00000432213 SPDYE2Q495Y8 402 aa17.98■□□□□ 0.47
SEC13-212ENST00000432213 PTPN18Q99952 460 aa17.98■□□□□ 0.47
SEC13-212ENST00000432213 TTF2Q9UNY4 1162 aaKnown RBP17.98■□□□□ 0.47
SEC13-212ENST00000432213 SREBF2Q12772 1141 aa17.97■□□□□ 0.47
SEC13-212ENST00000432213 UBE4AQ14139 1066 aa17.97■□□□□ 0.47
SEC13-212ENST00000432213 SLC10A4Q96EP9 437 aa17.97■□□□□ 0.47
SEC13-212ENST00000432213 FKTNO75072 461 aa17.96■□□□□ 0.47
SEC13-212ENST00000432213 HIBADHP31937 336 aaKnown RBP17.96■□□□□ 0.47
SEC13-212ENST00000432213 CACNB3P54284 484 aa17.96■□□□□ 0.47
SEC13-212ENST00000432213 NOM1Q5C9Z4 860 aaKnown RBP17.96■□□□□ 0.47
SEC13-212ENST00000432213 TMEM39BQ9GZU3 492 aa17.96■□□□□ 0.47
SEC13-212ENST00000432213 PPP2R3BQ9Y5P8 575 aa17.96■□□□□ 0.47
SEC13-212ENST00000432213 TCP10L2B9ZVM9 353 aa17.95■□□□□ 0.46
SEC13-212ENST00000432213 CHAF1AQ13111 956 aaPredicted RBP17.95■□□□□ 0.46
SEC13-212ENST00000432213 FBXO33Q7Z6M2 555 aa17.95■□□□□ 0.46
SEC13-212ENST00000432213 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
SEC13-212ENST00000432213 SSH1Q8WYL5 1049 aa17.95■□□□□ 0.46
SEC13-212ENST00000432213 ELP3Q9H9T3 547 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms