RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 UBE3BQ7Z3V4 1068 aa11.58□□□□□ -0.56
NEDD1-203ENST00000429527 C16orf71Q8IYS4 520 aaPredicted RBP11.58□□□□□ -0.56
NEDD1-203ENST00000429527 INTS4Q96HW7 963 aaKnown RBP11.58□□□□□ -0.56
NEDD1-203ENST00000429527 HHIPL1Q96JK4 782 aa11.58□□□□□ -0.56
NEDD1-203ENST00000429527 STAP2Q9UGK3 403 aa11.58□□□□□ -0.56
NEDD1-203ENST00000429527 MCM2P49736 904 aa11.57□□□□□ -0.56
NEDD1-203ENST00000429527 COA1Q9GZY4 146 aa11.57□□□□□ -0.56
NEDD1-203ENST00000429527 PITPNM2Q9BZ72 1349 aa11.57□□□□□ -0.56
NEDD1-203ENST00000429527 MAST2Q6P0Q8 1798 aa11.57□□□□□ -0.56
NEDD1-203ENST00000429527 WASHC4Q2M389 1173 aa11.57□□□□□ -0.56
NEDD1-203ENST00000429527 SLC51AQ86UW1 340 aa11.57□□□□□ -0.56
NEDD1-203ENST00000429527 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
NEDD1-203ENST00000429527 HDAC5Q9UQL6 1122 aa11.57□□□□□ -0.56
NEDD1-203ENST00000429527 ANKRD18BA2A2Z9 1011 aa11.56□□□□□ -0.56
NEDD1-203ENST00000429527 IL1R1P14778 569 aa11.56□□□□□ -0.56
NEDD1-203ENST00000429527 ITGA6P23229 1130 aa11.56□□□□□ -0.56
NEDD1-203ENST00000429527 TMEM87AQ8NBN3 555 aa11.56□□□□□ -0.56
NEDD1-203ENST00000429527 ZBED3Q96IU2 234 aaPredicted RBP11.56□□□□□ -0.56
NEDD1-203ENST00000429527 RFX5P48382 616 aaPredicted RBP11.56□□□□□ -0.56
NEDD1-203ENST00000429527 ANKRD45Q5TZF3 282 aa11.56□□□□□ -0.56
NEDD1-203ENST00000429527 MTMR14Q8NCE2 650 aa11.56□□□□□ -0.56
NEDD1-203ENST00000429527 ECE2O60344 883 aa11.56□□□□□ -0.56
NEDD1-203ENST00000429527 IGHMBP2P38935 993 aaKnown RBP11.56□□□□□ -0.56
NEDD1-203ENST00000429527 VGLL2Q8N8G2 317 aa11.56□□□□□ -0.56
NEDD1-203ENST00000429527 USP44Q9H0E7 712 aa11.56□□□□□ -0.56
NEDD1-203ENST00000429527 MROH5Q6ZUA9 1318 aa11.55□□□□□ -0.56
NEDD1-203ENST00000429527 OFD1O75665 1012 aa11.55□□□□□ -0.56
NEDD1-203ENST00000429527 CIAO1O76071 339 aa11.55□□□□□ -0.56
NEDD1-203ENST00000429527 ZNF219Q9P2Y4 722 aaPredicted RBP11.55□□□□□ -0.56
NEDD1-203ENST00000429527 FAM205AQ6ZU69 1335 aa11.55□□□□□ -0.56
NEDD1-203ENST00000429527 EPHA10Q5JZY3 1008 aa11.55□□□□□ -0.56
NEDD1-203ENST00000429527 SUCLG2Q96I99 432 aa11.55□□□□□ -0.56
NEDD1-203ENST00000429527 ZSCAN30Q86W11 494 aa11.54□□□□□ -0.56
NEDD1-203ENST00000429527 ZDHHC9Q9Y397 364 aa11.54□□□□□ -0.56
NEDD1-203ENST00000429527 RIPOR2Q9Y4F9 1068 aa11.54□□□□□ -0.56
NEDD1-203ENST00000429527 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
NEDD1-203ENST00000429527 F6X3S4 739 aa11.54□□□□□ -0.56
NEDD1-203ENST00000429527 NOL7Q9UMY1 257 aaKnown RBP11.54□□□□□ -0.56
NEDD1-203ENST00000429527 PDS5AQ29RF7 1337 aaKnown RBP11.54□□□□□ -0.56
NEDD1-203ENST00000429527 UBE4AQ14139 1066 aa11.54□□□□□ -0.56
NEDD1-203ENST00000429527 STRIP1Q5VSL9 837 aa11.54□□□□□ -0.56
NEDD1-203ENST00000429527 GOLGA6L22H0YM25 854 aa11.53□□□□□ -0.56
NEDD1-203ENST00000429527 LMOD1P29536 600 aaPredicted RBP11.53□□□□□ -0.56
NEDD1-203ENST00000429527 RSBN1LQ6PCB5 846 aaPredicted RBP11.53□□□□□ -0.56
NEDD1-203ENST00000429527 KLRG1Q96E93 195 aa11.53□□□□□ -0.56
NEDD1-203ENST00000429527 ZNF804BA4D1E1 1349 aa11.53□□□□□ -0.56
NEDD1-203ENST00000429527 IGSF3O75054 1194 aa11.53□□□□□ -0.56
NEDD1-203ENST00000429527 UFL1O94874 794 aa11.53□□□□□ -0.56
NEDD1-203ENST00000429527 IFIT5Q13325 482 aaKnown RBP11.53□□□□□ -0.56
NEDD1-203ENST00000429527 MYH15Q9Y2K3 1946 aa11.53□□□□□ -0.56
NEDD1-203ENST00000429527 RASSF10A6NK89 507 aa11.53□□□□□ -0.56
NEDD1-203ENST00000429527 REC8O95072 547 aa11.53□□□□□ -0.56
NEDD1-203ENST00000429527 GMPSP49915 693 aaPredicted RBP11.53□□□□□ -0.56
NEDD1-203ENST00000429527 DACT2Q5SW24 774 aa11.53□□□□□ -0.56
NEDD1-203ENST00000429527 FGFR2P21802 821 aa11.52□□□□□ -0.56
NEDD1-203ENST00000429527 CHRNDQ07001 517 aa11.52□□□□□ -0.56
NEDD1-203ENST00000429527 ZNF526Q8TF50 670 aaPredicted RBP11.52□□□□□ -0.56
NEDD1-203ENST00000429527 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.52□□□□□ -0.56
NEDD1-203ENST00000429527 PSMD14O00487 310 aa11.52□□□□□ -0.57
NEDD1-203ENST00000429527 BRD1O95696 1058 aa11.52□□□□□ -0.57
NEDD1-203ENST00000429527 SDSP20132 328 aa11.52□□□□□ -0.57
NEDD1-203ENST00000429527 MRIQ9BWK5 157 aa11.52□□□□□ -0.57
NEDD1-203ENST00000429527 NSFL1CQ9UNZ2 370 aaKnown RBP11.52□□□□□ -0.57
NEDD1-203ENST00000429527 ZC3H12CQ9C0D7 883 aaKnown RBP11.51□□□□□ -0.57
NEDD1-203ENST00000429527 NBPF7P0C2Y1 421 aaPredicted RBP11.51□□□□□ -0.57
NEDD1-203ENST00000429527 LMBR1LQ6UX01 489 aa11.51□□□□□ -0.57
NEDD1-203ENST00000429527 RPAP1Q9BWH6 1393 aaPredicted RBP11.51□□□□□ -0.57
NEDD1-203ENST00000429527 USP17L3A6NCW0 530 aa11.51□□□□□ -0.57
NEDD1-203ENST00000429527 USP17L4A6NCW7 530 aa11.51□□□□□ -0.57
NEDD1-203ENST00000429527 ZSCAN23Q3MJ62 389 aa11.51□□□□□ -0.57
NEDD1-203ENST00000429527 USP17L1Q7RTZ2 530 aa11.51□□□□□ -0.57
NEDD1-203ENST00000429527 ERC2O15083 957 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 COPRSQ9NQ92 184 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 C9orf78Q9NZ63 289 aaPredicted RBP11.5□□□□□ -0.57
NEDD1-203ENST00000429527 DOCK2Q92608 1830 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 UNCXA6NJT0 531 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 EPS15P42566 896 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 NASPP49321 788 aaPredicted RBP11.5□□□□□ -0.57
NEDD1-203ENST00000429527 FBXO33Q7Z6M2 555 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 KCNB2Q92953 911 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 BICC1Q9H694 974 aaKnown RBP11.5□□□□□ -0.57
NEDD1-203ENST00000429527 SUGT1Q9Y2Z0 365 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 FOCADQ5VW36 1801 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 ST18O60284 1047 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 MBD3O95983 291 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
NEDD1-203ENST00000429527 LRSAM1Q6UWE0 723 aa11.5□□□□□ -0.57
NEDD1-203ENST00000429527 TDRD7Q8NHU6 1098 aaKnown RBP11.5□□□□□ -0.57
NEDD1-203ENST00000429527 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.5□□□□□ -0.57
NEDD1-203ENST00000429527 CCDC57Q2TAC2 916 aa11.49□□□□□ -0.57
NEDD1-203ENST00000429527 CASC1Q6TDU7 716 aa11.49□□□□□ -0.57
NEDD1-203ENST00000429527 MPHOSPH8Q99549 860 aa11.49□□□□□ -0.57
NEDD1-203ENST00000429527 ANKIB1Q9P2G1 1089 aa11.49□□□□□ -0.57
NEDD1-203ENST00000429527 CNOT7Q9UIV1 285 aaKnown RBP11.49□□□□□ -0.57
NEDD1-203ENST00000429527 TLL2Q9Y6L7 1015 aa11.49□□□□□ -0.57
NEDD1-203ENST00000429527 SALL1Q9NSC2 1324 aa11.49□□□□□ -0.57
NEDD1-203ENST00000429527 TMEM88BA6NKF7 163 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 C6orf229H3BNL8 230 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 GNAI3P08754 354 aa11.48□□□□□ -0.57
NEDD1-203ENST00000429527 GPT2Q8TD30 523 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms