RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 SAGE1Q9NXZ1 904 aa19.64■□□□□ 0.73
SEC13-210ENST00000428626 FZD1Q9UP38 647 aa19.64■□□□□ 0.73
SEC13-210ENST00000428626 F8W031 263 aaPredicted RBP19.63■□□□□ 0.73
SEC13-210ENST00000428626 MMP14P50281 582 aa19.63■□□□□ 0.73
SEC13-210ENST00000428626 TAF7LQ5H9L4 462 aa19.63■□□□□ 0.73
SEC13-210ENST00000428626 ZNF804AQ7Z570 1209 aa19.63■□□□□ 0.73
SEC13-210ENST00000428626 CDCA7LQ96GN5 454 aa19.63■□□□□ 0.73
SEC13-210ENST00000428626 BICC1Q9H694 974 aaKnown RBP19.63■□□□□ 0.73
SEC13-210ENST00000428626 HDAC9Q9UKV0 1011 aa19.63■□□□□ 0.73
SEC13-210ENST00000428626 CCDC85CA6NKD9 419 aa19.62■□□□□ 0.73
SEC13-210ENST00000428626 GYG1P46976 350 aa19.62■□□□□ 0.73
SEC13-210ENST00000428626 SLFN5Q08AF3 891 aa19.62■□□□□ 0.73
SEC13-210ENST00000428626 PRKG1Q13976 671 aa19.62■□□□□ 0.73
SEC13-210ENST00000428626 RABL6Q3YEC7 729 aaPredicted RBP19.62■□□□□ 0.73
SEC13-210ENST00000428626 MTMR14Q8NCE2 650 aa19.62■□□□□ 0.73
SEC13-210ENST00000428626 RIPOR2Q9Y4F9 1068 aa19.62■□□□□ 0.73
SEC13-210ENST00000428626 SSC5DA1L4H1 1573 aa19.61■□□□□ 0.73
SEC13-210ENST00000428626 ECM29Q5VYK3 1845 aa19.61■□□□□ 0.73
SEC13-210ENST00000428626 PTPN12Q05209 780 aaKnown RBP19.61■□□□□ 0.73
SEC13-210ENST00000428626 DGKZQ13574 1117 aa19.61■□□□□ 0.73
SEC13-210ENST00000428626 DLGAP5Q15398 846 aa19.61■□□□□ 0.73
SEC13-210ENST00000428626 APOBEC3FQ8IUX4 373 aaKnown RBP19.61■□□□□ 0.73
SEC13-210ENST00000428626 TDRD7Q8NHU6 1098 aaKnown RBP19.61■□□□□ 0.73
SEC13-210ENST00000428626 FAM84BQ96KN1 310 aaPredicted RBP19.61■□□□□ 0.73
SEC13-210ENST00000428626 PRMT6Q96LA8 375 aaPredicted RBP19.61■□□□□ 0.73
SEC13-210ENST00000428626 E9PSI1 815 aa19.6■□□□□ 0.73
SEC13-210ENST00000428626 FKBP1AP62942 108 aaKnown RBP19.6■□□□□ 0.73
SEC13-210ENST00000428626 UBE4AQ14139 1066 aa19.6■□□□□ 0.73
SEC13-210ENST00000428626 TTLL12Q14166 644 aaPredicted RBP19.6■□□□□ 0.73
SEC13-210ENST00000428626 CFAP100Q494V2 611 aa19.6■□□□□ 0.73
SEC13-210ENST00000428626 LRRC24Q50LG9 513 aa19.6■□□□□ 0.73
SEC13-210ENST00000428626 DEFB129Q9H1M3 183 aa19.6■□□□□ 0.73
SEC13-210ENST00000428626 FAM205AQ6ZU69 1335 aa19.59■□□□□ 0.73
SEC13-210ENST00000428626 CLRN2A0PK11 232 aa19.59■□□□□ 0.73
SEC13-210ENST00000428626 SPDYE2BA6NHP3 402 aa19.59■□□□□ 0.73
SEC13-210ENST00000428626 SPDYE6P0CI01 402 aa19.59■□□□□ 0.73
SEC13-210ENST00000428626 KLHDC4Q8TBB5 520 aa19.59■□□□□ 0.73
SEC13-210ENST00000428626 USP44Q9H0E7 712 aa19.59■□□□□ 0.73
SEC13-210ENST00000428626 PTPRCP08575 1304 aa19.58■□□□□ 0.73
SEC13-210ENST00000428626 MKRN3Q13064 507 aaKnown RBP19.58■□□□□ 0.72
SEC13-210ENST00000428626 GRIK5Q16478 980 aa19.58■□□□□ 0.72
SEC13-210ENST00000428626 LDLRAD1Q5T700 205 aa19.58■□□□□ 0.72
SEC13-210ENST00000428626 HIBADHP31937 336 aaKnown RBP19.57■□□□□ 0.72
SEC13-210ENST00000428626 NF2P35240 595 aa19.57■□□□□ 0.72
SEC13-210ENST00000428626 TRMT2AQ8IZ69 625 aaKnown RBP19.57■□□□□ 0.72
SEC13-210ENST00000428626 VGLL2Q8N8G2 317 aa19.57■□□□□ 0.72
SEC13-210ENST00000428626 ANGEL1Q9UNK9 670 aaKnown RBP19.57■□□□□ 0.72
SEC13-210ENST00000428626 COL1A1P02452 1464 aaPredicted RBP19.56■□□□□ 0.72
SEC13-210ENST00000428626 MFSD14BQ5SR56 506 aa19.56■□□□□ 0.72
SEC13-210ENST00000428626 FBXO33Q7Z6M2 555 aa19.56■□□□□ 0.72
SEC13-210ENST00000428626 IQSEC3Q9UPP2 1182 aaPredicted RBP19.56■□□□□ 0.72
SEC13-210ENST00000428626 ARAP2Q8WZ64 1704 aa19.56■□□□□ 0.72
SEC13-210ENST00000428626 MROH5Q6ZUA9 1318 aa19.55■□□□□ 0.72
SEC13-210ENST00000428626 TBC1D8O95759 1140 aa19.55■□□□□ 0.72
SEC13-210ENST00000428626 TM4SF4P48230 202 aa19.55■□□□□ 0.72
SEC13-210ENST00000428626 ARMC9Q7Z3E5 817 aa19.55■□□□□ 0.72
SEC13-210ENST00000428626 REM2Q8IYK8 340 aaPredicted RBP19.55■□□□□ 0.72
SEC13-210ENST00000428626 RFX5P48382 616 aaPredicted RBP19.54■□□□□ 0.72
SEC13-210ENST00000428626 RGS19P49795 217 aa19.54■□□□□ 0.72
SEC13-210ENST00000428626 MAP3K11Q16584 847 aa19.54■□□□□ 0.72
SEC13-210ENST00000428626 NBPF12Q5TAG4 269 aaPredicted RBP19.54■□□□□ 0.72
SEC13-210ENST00000428626 CLMNQ96JQ2 1002 aa19.54■□□□□ 0.72
SEC13-210ENST00000428626 R3HDMLQ9H3Y0 253 aa19.54■□□□□ 0.72
SEC13-210ENST00000428626 VEZTQ9HBM0 779 aa19.54■□□□□ 0.72
SEC13-210ENST00000428626 TTF2Q9UNY4 1162 aaKnown RBP19.54■□□□□ 0.72
SEC13-210ENST00000428626 RBM5P52756 815 aaKnown RBP eCLIP19.53■□□□□ 0.72
SEC13-210ENST00000428626 METTL24Q5JXM2 366 aa19.53■□□□□ 0.72
SEC13-210ENST00000428626 SPRYD7Q5W111 196 aa19.53■□□□□ 0.72
SEC13-210ENST00000428626 CDAN1Q8IWY9 1227 aa19.53■□□□□ 0.72
SEC13-210ENST00000428626 PDE8BO95263 885 aa19.52■□□□□ 0.72
SEC13-210ENST00000428626 RASA3Q14644 834 aa19.52■□□□□ 0.72
SEC13-210ENST00000428626 ALDH1L2Q3SY69 923 aa19.52■□□□□ 0.72
SEC13-210ENST00000428626 TDRD3Q9H7E2 651 aaKnown RBP19.52■□□□□ 0.72
SEC13-210ENST00000428626 PPP2R3BQ9Y5P8 575 aa19.52■□□□□ 0.72
SEC13-210ENST00000428626 BCAMP50895 628 aa19.51■□□□□ 0.71
SEC13-210ENST00000428626 SPDYE2Q495Y8 402 aa19.51■□□□□ 0.71
SEC13-210ENST00000428626 ZNF296Q8WUU4 475 aaPredicted RBP19.51■□□□□ 0.71
SEC13-210ENST00000428626 SMC4Q9NTJ3 1288 aa19.51■□□□□ 0.71
SEC13-210ENST00000428626 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.51■□□□□ 0.71
SEC13-210ENST00000428626 ZNF70Q9UC06 446 aaPredicted RBP19.51■□□□□ 0.71
SEC13-210ENST00000428626 SERPINA10Q9UK55 444 aa19.51■□□□□ 0.71
SEC13-210ENST00000428626 MYO1BO43795 1136 aa19.5■□□□□ 0.71
SEC13-210ENST00000428626 USP2O75604 605 aaPredicted RBP19.5■□□□□ 0.71
SEC13-210ENST00000428626 FGFR2P21802 821 aa19.5■□□□□ 0.71
SEC13-210ENST00000428626 CHAF1AQ13111 956 aaPredicted RBP19.5■□□□□ 0.71
SEC13-210ENST00000428626 CTU1Q7Z7A3 348 aaKnown RBP19.5■□□□□ 0.71
SEC13-210ENST00000428626 DZIP1LQ8IYY4 767 aaKnown RBP19.5■□□□□ 0.71
SEC13-210ENST00000428626 OTOFQ9HC10 1997 aa19.5■□□□□ 0.71
SEC13-210ENST00000428626 GJA5P36382 358 aa19.49■□□□□ 0.71
SEC13-210ENST00000428626 CRKP46108 304 aa19.49■□□□□ 0.71
SEC13-210ENST00000428626 TEPSINQ96N21 525 aa19.49■□□□□ 0.71
SEC13-210ENST00000428626 LAMB1P07942 1786 aa19.49■□□□□ 0.71
SEC13-210ENST00000428626 GPR25O00155 361 aa19.48■□□□□ 0.71
SEC13-210ENST00000428626 ATG9AQ7Z3C6 839 aa19.48■□□□□ 0.71
SEC13-210ENST00000428626 SLC10A4Q96EP9 437 aa19.48■□□□□ 0.71
SEC13-210ENST00000428626 WNK4Q96J92 1243 aa19.48■□□□□ 0.71
SEC13-210ENST00000428626 NOB1Q9ULX3 412 aaKnown RBP19.48■□□□□ 0.71
SEC13-210ENST00000428626 EYA2O00167 538 aa19.47■□□□□ 0.71
SEC13-210ENST00000428626 PPP1R12BO60237 982 aaPredicted RBP19.47■□□□□ 0.71
SEC13-210ENST00000428626 SREBF2Q12772 1141 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms