RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 NBPF9Q3BBW0 867 aa25.76■■□□□ 1.71
HSPG2-205ENST00000427897 DLK2Q6UY11 383 aa25.76■■□□□ 1.71
HSPG2-205ENST00000427897 SAPCD2Q86UD0 394 aa25.76■■□□□ 1.71
HSPG2-205ENST00000427897 FAM84BQ96KN1 310 aaPredicted RBP25.76■■□□□ 1.71
HSPG2-205ENST00000427897 SIL1Q9H173 461 aa25.76■■□□□ 1.71
HSPG2-205ENST00000427897 PITPNM2Q9BZ72 1349 aa25.75■■□□□ 1.71
HSPG2-205ENST00000427897 GBA2Q9HCG7 927 aaPredicted RBP25.75■■□□□ 1.71
HSPG2-205ENST00000427897 WNT10BO00744 389 aa25.74■■□□□ 1.71
HSPG2-205ENST00000427897 RBM5P52756 815 aaKnown RBP eCLIP25.74■■□□□ 1.71
HSPG2-205ENST00000427897 HUNKP57058 714 aa25.74■■□□□ 1.71
HSPG2-205ENST00000427897 FKBP1AP62942 108 aaKnown RBP25.74■■□□□ 1.71
HSPG2-205ENST00000427897 PTPN12Q05209 780 aaKnown RBP25.74■■□□□ 1.71
HSPG2-205ENST00000427897 PUM3Q15397 648 aaKnown RBP25.74■■□□□ 1.71
HSPG2-205ENST00000427897 TDRD7Q8NHU6 1098 aaKnown RBP25.74■■□□□ 1.71
HSPG2-205ENST00000427897 SLC5A1P13866 664 aa25.73■■□□□ 1.71
HSPG2-205ENST00000427897 RFX5P48382 616 aaPredicted RBP25.73■■□□□ 1.71
HSPG2-205ENST00000427897 MAP2K1Q02750 393 aaPredicted RBP25.73■■□□□ 1.71
HSPG2-205ENST00000427897 FTSJ3Q8IY81 847 aaKnown RBP25.73■■□□□ 1.71
HSPG2-205ENST00000427897 CDCA5Q96FF9 252 aa25.73■■□□□ 1.71
HSPG2-205ENST00000427897 BEGAINQ9BUH8 593 aa25.73■■□□□ 1.71
HSPG2-205ENST00000427897 CEP126Q9P2H0 1117 aa25.73■■□□□ 1.71
HSPG2-205ENST00000427897 FBXO3Q9UK99 471 aa25.73■■□□□ 1.71
HSPG2-205ENST00000427897 MYO1BO43795 1136 aa25.72■■□□□ 1.71
HSPG2-205ENST00000427897 IQSEC3Q9UPP2 1182 aaPredicted RBP25.72■■□□□ 1.71
HSPG2-205ENST00000427897 NF2P35240 595 aa25.71■■□□□ 1.71
HSPG2-205ENST00000427897 CHAF1AQ13111 956 aaPredicted RBP25.71■■□□□ 1.71
HSPG2-205ENST00000427897 MFSD14BQ5SR56 506 aa25.71■■□□□ 1.71
HSPG2-205ENST00000427897 CERS5Q8N5B7 392 aa25.71■■□□□ 1.71
HSPG2-205ENST00000427897 HHIPL1Q96JK4 782 aa25.71■■□□□ 1.71
HSPG2-205ENST00000427897 SCAF8Q9UPN6 1271 aaKnown RBP25.71■■□□□ 1.71
HSPG2-205ENST00000427897 ZNF646O15015 1829 aaPredicted RBP25.7■■□□□ 1.71
HSPG2-205ENST00000427897 FAM205AQ6ZU69 1335 aa25.7■■□□□ 1.71
HSPG2-205ENST00000427897 CIAO1O76071 339 aa25.7■■□□□ 1.7
HSPG2-205ENST00000427897 GNAI2P04899 355 aa25.7■■□□□ 1.7
HSPG2-205ENST00000427897 FBXO33Q7Z6M2 555 aa25.7■■□□□ 1.7
HSPG2-205ENST00000427897 APOBEC3FQ8IUX4 373 aaKnown RBP25.7■■□□□ 1.7
HSPG2-205ENST00000427897 VGLL2Q8N8G2 317 aa25.7■■□□□ 1.7
HSPG2-205ENST00000427897 LPIN2Q92539 896 aa25.7■■□□□ 1.7
HSPG2-205ENST00000427897 TNNQ9UQP3 1299 aa25.7■■□□□ 1.7
HSPG2-205ENST00000427897 SRGAP3O43295 1099 aa25.69■■□□□ 1.7
HSPG2-205ENST00000427897 TTLL12Q14166 644 aaPredicted RBP25.69■■□□□ 1.7
HSPG2-205ENST00000427897 IL15P40933 162 aaPredicted RBP25.68■■□□□ 1.7
HSPG2-205ENST00000427897 BCAMP50895 628 aa25.68■■□□□ 1.7
HSPG2-205ENST00000427897 CFAP100Q494V2 611 aa25.68■■□□□ 1.7
HSPG2-205ENST00000427897 TMEM57Q8N5G2 664 aa25.68■■□□□ 1.7
HSPG2-205ENST00000427897 TTF2Q9UNY4 1162 aaKnown RBP25.68■■□□□ 1.7
HSPG2-205ENST00000427897 PA2G4Q9UQ80 394 aaKnown RBP25.68■■□□□ 1.7
HSPG2-205ENST00000427897 MAP2K2P36507 400 aa25.67■■□□□ 1.7
HSPG2-205ENST00000427897 ATG9AQ7Z3C6 839 aa25.67■■□□□ 1.7
HSPG2-205ENST00000427897 DZIP1LQ8IYY4 767 aaKnown RBP25.67■■□□□ 1.7
HSPG2-205ENST00000427897 TBC1D22AQ8WUA7 517 aa25.67■■□□□ 1.7
HSPG2-205ENST00000427897 AOC2O75106 756 aa25.66■■□□□ 1.7
HSPG2-205ENST00000427897 ZNF157P51786 506 aaPredicted RBP25.66■■□□□ 1.7
HSPG2-205ENST00000427897 ATP2B3Q16720 1220 aa25.66■■□□□ 1.7
HSPG2-205ENST00000427897 PRAMEF18Q5VWM3 479 aa25.66■■□□□ 1.7
HSPG2-205ENST00000427897 RGMBQ6NW40 437 aa25.66■■□□□ 1.7
HSPG2-205ENST00000427897 FGFR2P21802 821 aa25.65■■□□□ 1.7
HSPG2-205ENST00000427897 ITPRIPQ8IWB1 547 aa25.65■■□□□ 1.7
HSPG2-205ENST00000427897 MTMR14Q8NCE2 650 aa25.65■■□□□ 1.7
HSPG2-205ENST00000427897 CCDC102AQ96A19 550 aa25.65■■□□□ 1.7
HSPG2-205ENST00000427897 COPRSQ9NQ92 184 aa25.65■■□□□ 1.7
HSPG2-205ENST00000427897 GNL3LQ9NVN8 582 aaKnown RBP25.65■■□□□ 1.7
HSPG2-205ENST00000427897 WBP1LQ9NX94 342 aa25.65■■□□□ 1.7
HSPG2-205ENST00000427897 FOXN1O15353 648 aa25.64■■□□□ 1.7
HSPG2-205ENST00000427897 CTCFP49711 727 aaPredicted RBP25.64■■□□□ 1.7
HSPG2-205ENST00000427897 FKBP1BP68106 108 aa25.64■■□□□ 1.7
HSPG2-205ENST00000427897 VEZTQ9HBM0 779 aa25.64■■□□□ 1.7
HSPG2-205ENST00000427897 NOGQ13253 232 aa25.63■■□□□ 1.69
HSPG2-205ENST00000427897 CLRN2A0PK11 232 aa25.62■■□□□ 1.69
HSPG2-205ENST00000427897 ZBED3Q96IU2 234 aaPredicted RBP25.62■■□□□ 1.69
HSPG2-205ENST00000427897 PRMT6Q96LA8 375 aaPredicted RBP25.62■■□□□ 1.69
HSPG2-205ENST00000427897 SERPINA10Q9UK55 444 aa25.62■■□□□ 1.69
HSPG2-205ENST00000427897 AKAP2Q9Y2D5 859 aa25.62■■□□□ 1.69
HSPG2-205ENST00000427897 SPDYE2BA6NHP3 402 aa25.61■■□□□ 1.69
HSPG2-205ENST00000427897 SPDYE6P0CI01 402 aa25.61■■□□□ 1.69
HSPG2-205ENST00000427897 G3BP1Q13283 466 aaKnown RBP eCLIP25.61■■□□□ 1.69
HSPG2-205ENST00000427897 COL13A1Q5TAT6 717 aaPredicted RBP25.61■■□□□ 1.69
HSPG2-205ENST00000427897 PCDHAC2Q9Y5I4 1007 aa25.61■■□□□ 1.69
HSPG2-205ENST00000427897 MS4A1P11836 297 aa25.6■■□□□ 1.69
HSPG2-205ENST00000427897 MTX1Q13505 466 aa25.6■■□□□ 1.69
HSPG2-205ENST00000427897 PRKG1Q13976 671 aa25.6■■□□□ 1.69
HSPG2-205ENST00000427897 ARMC9Q7Z3E5 817 aa25.6■■□□□ 1.69
HSPG2-205ENST00000427897 WDR66Q8TBY9 1149 aa25.6■■□□□ 1.69
HSPG2-205ENST00000427897 DEFB129Q9H1M3 183 aa25.6■■□□□ 1.69
HSPG2-205ENST00000427897 CRKP46108 304 aa25.59■■□□□ 1.69
HSPG2-205ENST00000427897 MAST3O60307 1309 aa25.59■■□□□ 1.69
HSPG2-205ENST00000427897 UBE2Q2LH0YL09 131 aa25.58■■□□□ 1.69
HSPG2-205ENST00000427897 TEKT1Q969V4 418 aa25.58■■□□□ 1.69
HSPG2-205ENST00000427897 PPP2R3BQ9Y5P8 575 aa25.58■■□□□ 1.69
HSPG2-205ENST00000427897 PCNTO95613 3336 aa25.57■■□□□ 1.68
HSPG2-205ENST00000427897 LBX1P52954 281 aa25.57■■□□□ 1.68
HSPG2-205ENST00000427897 TFCP2Q12800 502 aa25.57■■□□□ 1.68
HSPG2-205ENST00000427897 TNFAIP1Q13829 316 aa25.57■■□□□ 1.68
HSPG2-205ENST00000427897 GORABQ5T7V8 394 aa25.57■■□□□ 1.68
HSPG2-205ENST00000427897 TNS4Q8IZW8 715 aa25.57■■□□□ 1.68
HSPG2-205ENST00000427897 NEUROD6Q96NK8 337 aa25.57■■□□□ 1.68
HSPG2-205ENST00000427897 TDRD3Q9H7E2 651 aaKnown RBP25.57■■□□□ 1.68
HSPG2-205ENST00000427897 ECM29Q5VYK3 1845 aa25.57■■□□□ 1.68
HSPG2-205ENST00000427897 TIMM10P62072 90 aa25.56■■□□□ 1.68
HSPG2-205ENST00000427897 OS9Q13438 667 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms