RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 ZNF408Q9H9D4 720 aa20.1■□□□□ 0.81
HLA-DQB2-230ENST00000427449 KIF16BQ96L93 1317 aa20.09■□□□□ 0.81
HLA-DQB2-230ENST00000427449 BCAR3O75815 825 aa20.09■□□□□ 0.81
HLA-DQB2-230ENST00000427449 HSPA8P11142 646 aaKnown RBP20.09■□□□□ 0.81
HLA-DQB2-230ENST00000427449 TRIM27P14373 513 aa20.09■□□□□ 0.81
HLA-DQB2-230ENST00000427449 KCNJ4P48050 445 aa20.09■□□□□ 0.81
HLA-DQB2-230ENST00000427449 FBXO33Q7Z6M2 555 aa20.09■□□□□ 0.81
HLA-DQB2-230ENST00000427449 MTMR14Q8NCE2 650 aa20.09■□□□□ 0.81
HLA-DQB2-230ENST00000427449 ARHGAP45Q92619 1136 aa20.09■□□□□ 0.81
HLA-DQB2-230ENST00000427449 GBA2Q9HCG7 927 aaPredicted RBP20.09■□□□□ 0.81
HLA-DQB2-230ENST00000427449 JAG2Q9Y219 1238 aa20.09■□□□□ 0.81
HLA-DQB2-230ENST00000427449 PLIN1O60240 522 aa20.08■□□□□ 0.81
HLA-DQB2-230ENST00000427449 ZNF804AQ7Z570 1209 aa20.08■□□□□ 0.81
HLA-DQB2-230ENST00000427449 CASP8AP2Q9UKL3 1982 aa20.08■□□□□ 0.8
HLA-DQB2-230ENST00000427449 PDE8BO95263 885 aa20.07■□□□□ 0.8
HLA-DQB2-230ENST00000427449 TAF7LQ5H9L4 462 aa20.07■□□□□ 0.8
HLA-DQB2-230ENST00000427449 API5Q9BZZ5 524 aaKnown RBP20.07■□□□□ 0.8
HLA-DQB2-230ENST00000427449 ECE1P42892 770 aa20.06■□□□□ 0.8
HLA-DQB2-230ENST00000427449 MMP14P50281 582 aa20.06■□□□□ 0.8
HLA-DQB2-230ENST00000427449 HUNKP57058 714 aa20.06■□□□□ 0.8
HLA-DQB2-230ENST00000427449 PRAMEF18Q5VWM3 479 aa20.06■□□□□ 0.8
HLA-DQB2-230ENST00000427449 SULF1Q8IWU6 871 aa20.06■□□□□ 0.8
HLA-DQB2-230ENST00000427449 FBXW7Q969H0 707 aa20.06■□□□□ 0.8
HLA-DQB2-230ENST00000427449 LRRFIP2Q9Y608 721 aaKnown RBP20.06■□□□□ 0.8
HLA-DQB2-230ENST00000427449 MAP2K2P36507 400 aa20.05■□□□□ 0.8
HLA-DQB2-230ENST00000427449 MOB2Q70IA6 237 aa20.05■□□□□ 0.8
HLA-DQB2-230ENST00000427449 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.05■□□□□ 0.8
HLA-DQB2-230ENST00000427449 MYO5AQ9Y4I1 1855 aaKnown RBP20.05■□□□□ 0.8
HLA-DQB2-230ENST00000427449 ZBED9Q6R2W3 1325 aa20.04■□□□□ 0.8
HLA-DQB2-230ENST00000427449 SPDYE2BA6NHP3 402 aa20.04■□□□□ 0.8
HLA-DQB2-230ENST00000427449 EYA2O00167 538 aa20.04■□□□□ 0.8
HLA-DQB2-230ENST00000427449 SLC10A3P09131 477 aa20.04■□□□□ 0.8
HLA-DQB2-230ENST00000427449 SPDYE6P0CI01 402 aa20.04■□□□□ 0.8
HLA-DQB2-230ENST00000427449 HNRNPUQ00839 825 aaKnown RBP eCLIP20.04■□□□□ 0.8
HLA-DQB2-230ENST00000427449 MTX1Q13505 466 aa20.04■□□□□ 0.8
HLA-DQB2-230ENST00000427449 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
HLA-DQB2-230ENST00000427449 MYH2Q9UKX2 1941 aa20.04■□□□□ 0.8
HLA-DQB2-230ENST00000427449 UBTFL1P0CB47 393 aaPredicted RBP20.03■□□□□ 0.8
HLA-DQB2-230ENST00000427449 HIBADHP31937 336 aaKnown RBP20.03■□□□□ 0.8
HLA-DQB2-230ENST00000427449 METTL24Q5JXM2 366 aa20.03■□□□□ 0.8
HLA-DQB2-230ENST00000427449 RASAL3Q86YV0 1011 aa20.03■□□□□ 0.8
HLA-DQB2-230ENST00000427449 CTCFP49711 727 aaPredicted RBP20.02■□□□□ 0.8
HLA-DQB2-230ENST00000427449 LBX1P52954 281 aa20.02■□□□□ 0.8
HLA-DQB2-230ENST00000427449 MAP2K1Q02750 393 aaPredicted RBP20.02■□□□□ 0.8
HLA-DQB2-230ENST00000427449 RGMBQ6NW40 437 aa20.02■□□□□ 0.8
HLA-DQB2-230ENST00000427449 ATF7IPQ6VMQ6 1270 aa20.02■□□□□ 0.8
HLA-DQB2-230ENST00000427449 OGFOD1Q8N543 542 aa20.02■□□□□ 0.8
HLA-DQB2-230ENST00000427449 PRMT6Q96LA8 375 aaPredicted RBP20.02■□□□□ 0.8
HLA-DQB2-230ENST00000427449 PA2G4Q9UQ80 394 aaKnown RBP20.02■□□□□ 0.8
HLA-DQB2-230ENST00000427449 CIAO1O76071 339 aa20.01■□□□□ 0.79
HLA-DQB2-230ENST00000427449 CFAP100Q494V2 611 aa20.01■□□□□ 0.79
HLA-DQB2-230ENST00000427449 MFSD14BQ5SR56 506 aa20.01■□□□□ 0.79
HLA-DQB2-230ENST00000427449 COPRSQ9NQ92 184 aa20.01■□□□□ 0.79
HLA-DQB2-230ENST00000427449 IQSEC3Q9UPP2 1182 aaPredicted RBP20.01■□□□□ 0.79
HLA-DQB2-230ENST00000427449 CDK5RAP2Q96SN8 1893 aa20.01■□□□□ 0.79
HLA-DQB2-230ENST00000427449 F8W031 263 aaPredicted RBP20■□□□□ 0.79
HLA-DQB2-230ENST00000427449 BCAMP50895 628 aa20■□□□□ 0.79
HLA-DQB2-230ENST00000427449 GRM1Q13255 1194 aa20■□□□□ 0.79
HLA-DQB2-230ENST00000427449 PUM3Q15397 648 aaKnown RBP20■□□□□ 0.79
HLA-DQB2-230ENST00000427449 PAXIP1Q6ZW49 1069 aaPredicted RBP20■□□□□ 0.79
HLA-DQB2-230ENST00000427449 FBXO3Q9UK99 471 aa20■□□□□ 0.79
HLA-DQB2-230ENST00000427449 MAST2Q6P0Q8 1798 aa20■□□□□ 0.79
HLA-DQB2-230ENST00000427449 DOCK2Q92608 1830 aa19.99■□□□□ 0.79
HLA-DQB2-230ENST00000427449 ZBTB22O15209 634 aa19.99■□□□□ 0.79
HLA-DQB2-230ENST00000427449 RLBP1P12271 317 aa19.99■□□□□ 0.79
HLA-DQB2-230ENST00000427449 FKBP1BP68106 108 aa19.99■□□□□ 0.79
HLA-DQB2-230ENST00000427449 NOGQ13253 232 aa19.99■□□□□ 0.79
HLA-DQB2-230ENST00000427449 APOBEC3FQ8IUX4 373 aaKnown RBP19.99■□□□□ 0.79
HLA-DQB2-230ENST00000427449 C2orf69Q8N8R5 385 aa19.99■□□□□ 0.79
HLA-DQB2-230ENST00000427449 FZD1Q9UP38 647 aa19.99■□□□□ 0.79
HLA-DQB2-230ENST00000427449 HTTP42858 3142 aa19.98■□□□□ 0.79
HLA-DQB2-230ENST00000427449 CDAN1Q8IWY9 1227 aa19.98■□□□□ 0.79
HLA-DQB2-230ENST00000427449 TSKSQ9UJT2 592 aa19.98■□□□□ 0.79
HLA-DQB2-230ENST00000427449 HDAC9Q9UKV0 1011 aa19.98■□□□□ 0.79
HLA-DQB2-230ENST00000427449 DLGAP5Q15398 846 aa19.97■□□□□ 0.79
HLA-DQB2-230ENST00000427449 SPDYE2Q495Y8 402 aa19.97■□□□□ 0.79
HLA-DQB2-230ENST00000427449 TMEM57Q8N5G2 664 aa19.97■□□□□ 0.79
HLA-DQB2-230ENST00000427449 SIL1Q9H173 461 aa19.97■□□□□ 0.79
HLA-DQB2-230ENST00000427449 SERPINA10Q9UK55 444 aa19.97■□□□□ 0.79
HLA-DQB2-230ENST00000427449 CLRN2A0PK11 232 aa19.96■□□□□ 0.79
HLA-DQB2-230ENST00000427449 MAP3K11Q16584 847 aa19.96■□□□□ 0.79
HLA-DQB2-230ENST00000427449 LDLRAD1Q5T700 205 aa19.96■□□□□ 0.79
HLA-DQB2-230ENST00000427449 TNS4Q8IZW8 715 aa19.96■□□□□ 0.79
HLA-DQB2-230ENST00000427449 TEPSINQ96N21 525 aa19.96■□□□□ 0.79
HLA-DQB2-230ENST00000427449 FOCADQ5VW36 1801 aa19.96■□□□□ 0.79
HLA-DQB2-230ENST00000427449 PNMA6EA0A0J9YXQ4 647 aa19.95■□□□□ 0.78
HLA-DQB2-230ENST00000427449 UBE2Q2LH0YL09 131 aa19.95■□□□□ 0.78
HLA-DQB2-230ENST00000427449 ADORA1P30542 326 aa19.95■□□□□ 0.78
HLA-DQB2-230ENST00000427449 KIF23Q02241 960 aaPredicted RBP19.95■□□□□ 0.78
HLA-DQB2-230ENST00000427449 LPIN2Q92539 896 aa19.95■□□□□ 0.78
HLA-DQB2-230ENST00000427449 CLUAP1Q96AJ1 413 aa19.95■□□□□ 0.78
HLA-DQB2-230ENST00000427449 AIDAQ96BJ3 306 aa19.95■□□□□ 0.78
HLA-DQB2-230ENST00000427449 DEFB129Q9H1M3 183 aa19.95■□□□□ 0.78
HLA-DQB2-230ENST00000427449 TTF2Q9UNY4 1162 aaKnown RBP19.95■□□□□ 0.78
HLA-DQB2-230ENST00000427449 ZNF157P51786 506 aaPredicted RBP19.94■□□□□ 0.78
HLA-DQB2-230ENST00000427449 CSRNP1Q96S65 589 aa19.94■□□□□ 0.78
HLA-DQB2-230ENST00000427449 SIPA1L1O43166 1804 aa19.94■□□□□ 0.78
HLA-DQB2-230ENST00000427449 RFX7Q2KHR2 1363 aa19.94■□□□□ 0.78
HLA-DQB2-230ENST00000427449 GNAI3P08754 354 aa19.93■□□□□ 0.78
HLA-DQB2-230ENST00000427449 PHKA1P46020 1223 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms