RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 ZNF804AQ7Z570 1209 aa12.96□□□□□ -0.33
HDLBP-213ENST00000427007 ZBED3Q96IU2 234 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-213ENST00000427007 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-213ENST00000427007 MMP14P50281 582 aa12.95□□□□□ -0.34
HDLBP-213ENST00000427007 PTPN12Q05209 780 aaKnown RBP12.95□□□□□ -0.34
HDLBP-213ENST00000427007 LDHAL6AQ6ZMR3 332 aa12.95□□□□□ -0.34
HDLBP-213ENST00000427007 C15orf52Q6ZUT6 534 aaKnown RBP12.95□□□□□ -0.34
HDLBP-213ENST00000427007 ARMC9Q7Z3E5 817 aa12.95□□□□□ -0.34
HDLBP-213ENST00000427007 CNNM1Q9NRU3 951 aa12.95□□□□□ -0.34
HDLBP-213ENST00000427007 C9orf78Q9NZ63 289 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-213ENST00000427007 ANGEL1Q9UNK9 670 aaKnown RBP12.95□□□□□ -0.34
HDLBP-213ENST00000427007 COL1A1P02452 1464 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-213ENST00000427007 CLRN2A0PK11 232 aa12.94□□□□□ -0.34
HDLBP-213ENST00000427007 IL1R1P14778 569 aa12.94□□□□□ -0.34
HDLBP-213ENST00000427007 SOX10P56693 466 aa12.94□□□□□ -0.34
HDLBP-213ENST00000427007 CFAP100Q494V2 611 aa12.94□□□□□ -0.34
HDLBP-213ENST00000427007 CTU1Q7Z7A3 348 aaKnown RBP12.94□□□□□ -0.34
HDLBP-213ENST00000427007 DEFB129Q9H1M3 183 aa12.94□□□□□ -0.34
HDLBP-213ENST00000427007 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
HDLBP-213ENST00000427007 AOX1Q06278 1338 aa12.93□□□□□ -0.34
HDLBP-213ENST00000427007 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-213ENST00000427007 TM4SF4P48230 202 aa12.93□□□□□ -0.34
HDLBP-213ENST00000427007 ZNF296Q8WUU4 475 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-213ENST00000427007 SUCLG2Q96I99 432 aa12.93□□□□□ -0.34
HDLBP-213ENST00000427007 SRCIN1Q9C0H9 1055 aa12.93□□□□□ -0.34
HDLBP-213ENST00000427007 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
HDLBP-213ENST00000427007 ARAP2Q8WZ64 1704 aa12.93□□□□□ -0.34
HDLBP-213ENST00000427007 ALDH1L1O75891 902 aa12.92□□□□□ -0.34
HDLBP-213ENST00000427007 RBM5P52756 815 aaKnown RBP eCLIP12.92□□□□□ -0.34
HDLBP-213ENST00000427007 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
HDLBP-213ENST00000427007 MTMR14Q8NCE2 650 aa12.92□□□□□ -0.34
HDLBP-213ENST00000427007 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-213ENST00000427007 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
HDLBP-213ENST00000427007 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
HDLBP-213ENST00000427007 MYO1BO43795 1136 aa12.91□□□□□ -0.34
HDLBP-213ENST00000427007 NBPF7P0C2Y1 421 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-213ENST00000427007 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
HDLBP-213ENST00000427007 GYG1P46976 350 aa12.91□□□□□ -0.34
HDLBP-213ENST00000427007 FKBP1AP62942 108 aaKnown RBP12.91□□□□□ -0.34
HDLBP-213ENST00000427007 LDLRAD1Q5T700 205 aa12.91□□□□□ -0.34
HDLBP-213ENST00000427007 SPRYD7Q5W111 196 aa12.91□□□□□ -0.34
HDLBP-213ENST00000427007 PIAS4Q8N2W9 510 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-213ENST00000427007 KAZALD1Q96I82 304 aa12.91□□□□□ -0.34
HDLBP-213ENST00000427007 TNRC18O15417 2968 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-213ENST00000427007 LAMB1P07942 1786 aa12.9□□□□□ -0.34
HDLBP-213ENST00000427007 GPR25O00155 361 aa12.9□□□□□ -0.34
HDLBP-213ENST00000427007 NBPF12Q5TAG4 269 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-213ENST00000427007 CLMNQ96JQ2 1002 aa12.9□□□□□ -0.34
HDLBP-213ENST00000427007 R3HDMLQ9H3Y0 253 aa12.9□□□□□ -0.34
HDLBP-213ENST00000427007 HPS5Q9UPZ3 1129 aa12.9□□□□□ -0.34
HDLBP-213ENST00000427007 PPP2R3BQ9Y5P8 575 aa12.9□□□□□ -0.34
HDLBP-213ENST00000427007 OTOFQ9HC10 1997 aa12.9□□□□□ -0.34
HDLBP-213ENST00000427007 PPP1R12BO60237 982 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-213ENST00000427007 HIBADHP31937 336 aaKnown RBP12.89□□□□□ -0.35
HDLBP-213ENST00000427007 UBE4AQ14139 1066 aa12.89□□□□□ -0.35
HDLBP-213ENST00000427007 MFSD14BQ5SR56 506 aa12.89□□□□□ -0.35
HDLBP-213ENST00000427007 TDRD7Q8NHU6 1098 aaKnown RBP12.89□□□□□ -0.35
HDLBP-213ENST00000427007 SLC10A4Q96EP9 437 aa12.89□□□□□ -0.35
HDLBP-213ENST00000427007 BICC1Q9H694 974 aaKnown RBP12.89□□□□□ -0.35
HDLBP-213ENST00000427007 TTF2Q9UNY4 1162 aaKnown RBP12.89□□□□□ -0.35
HDLBP-213ENST00000427007 FAM205AQ6ZU69 1335 aa12.88□□□□□ -0.35
HDLBP-213ENST00000427007 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
HDLBP-213ENST00000427007 RASA3Q14644 834 aa12.88□□□□□ -0.35
HDLBP-213ENST00000427007 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
HDLBP-213ENST00000427007 LRRC24Q50LG9 513 aa12.88□□□□□ -0.35
HDLBP-213ENST00000427007 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
HDLBP-213ENST00000427007 WNK4Q96J92 1243 aa12.88□□□□□ -0.35
HDLBP-213ENST00000427007 FAM84BQ96KN1 310 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-213ENST00000427007 TDRD3Q9H7E2 651 aaKnown RBP12.88□□□□□ -0.35
HDLBP-213ENST00000427007 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-213ENST00000427007 UTYO14607 1347 aa12.88□□□□□ -0.35
HDLBP-213ENST00000427007 MROH5Q6ZUA9 1318 aa12.88□□□□□ -0.35
HDLBP-213ENST00000427007 MANSC4A6NHS7 340 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-213ENST00000427007 FKTNO75072 461 aa12.87□□□□□ -0.35
HDLBP-213ENST00000427007 PKN2Q16513 984 aaKnown RBP12.87□□□□□ -0.35
HDLBP-213ENST00000427007 SUPT20HL1Q3ZLR7 823 aa12.87□□□□□ -0.35
HDLBP-213ENST00000427007 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-213ENST00000427007 RIPOR2Q9Y4F9 1068 aa12.87□□□□□ -0.35
HDLBP-213ENST00000427007 IGF2BP3O00425 579 aaKnown RBP eCLIP12.86□□□□□ -0.35
HDLBP-213ENST00000427007 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-213ENST00000427007 ZBTB48P10074 688 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-213ENST00000427007 IREB2P48200 963 aaKnown RBP12.86□□□□□ -0.35
HDLBP-213ENST00000427007 CHAF1AQ13111 956 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-213ENST00000427007 GRIK5Q16478 980 aa12.86□□□□□ -0.35
HDLBP-213ENST00000427007 RABL6Q3YEC7 729 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-213ENST00000427007 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
HDLBP-213ENST00000427007 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
HDLBP-213ENST00000427007 METTL24Q5JXM2 366 aa12.86□□□□□ -0.35
HDLBP-213ENST00000427007 VPS37DQ86XT2 251 aa12.86□□□□□ -0.35
HDLBP-213ENST00000427007 IFNL1Q8IU54 200 aa12.86□□□□□ -0.35
HDLBP-213ENST00000427007 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
HDLBP-213ENST00000427007 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
HDLBP-213ENST00000427007 KLHDC4Q8TBB5 520 aa12.86□□□□□ -0.35
HDLBP-213ENST00000427007 CFHR5Q9BXR6 569 aa12.86□□□□□ -0.35
HDLBP-213ENST00000427007 SERPINA10Q9UK55 444 aa12.86□□□□□ -0.35
HDLBP-213ENST00000427007 TCP10L2B9ZVM9 353 aa12.85□□□□□ -0.35
HDLBP-213ENST00000427007 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-213ENST00000427007 ALDH1A1P00352 501 aa12.85□□□□□ -0.35
HDLBP-213ENST00000427007 GJA5P36382 358 aa12.85□□□□□ -0.35
HDLBP-213ENST00000427007 CRKP46108 304 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms