RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 RABL6Q3YEC7 729 aaPredicted RBP14.56□□□□□ -0.08
SQSTM1-203ENST00000422245 MTMR14Q8NCE2 650 aa14.56□□□□□ -0.08
SQSTM1-203ENST00000422245 KAZALD1Q96I82 304 aa14.56□□□□□ -0.08
SQSTM1-203ENST00000422245 SCAF8Q9UPN6 1271 aaKnown RBP14.56□□□□□ -0.08
SQSTM1-203ENST00000422245 ARAP2Q8WZ64 1704 aa14.55□□□□□ -0.08
SQSTM1-203ENST00000422245 PLIN1O60240 522 aa14.55□□□□□ -0.08
SQSTM1-203ENST00000422245 SLFN5Q08AF3 891 aa14.55□□□□□ -0.08
SQSTM1-203ENST00000422245 PRAMEF18Q5VWM3 479 aa14.55□□□□□ -0.08
SQSTM1-203ENST00000422245 SSH1Q8WYL5 1049 aa14.55□□□□□ -0.08
SQSTM1-203ENST00000422245 BICC1Q9H694 974 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-203ENST00000422245 PPP2R3BQ9Y5P8 575 aa14.55□□□□□ -0.08
SQSTM1-203ENST00000422245 MROH5Q6ZUA9 1318 aa14.55□□□□□ -0.08
SQSTM1-203ENST00000422245 UBE2Q2LH0YL09 131 aa14.54□□□□□ -0.08
SQSTM1-203ENST00000422245 MYO1BO43795 1136 aa14.54□□□□□ -0.08
SQSTM1-203ENST00000422245 MOB2Q70IA6 237 aa14.54□□□□□ -0.08
SQSTM1-203ENST00000422245 ARMC9Q7Z3E5 817 aa14.54□□□□□ -0.08
SQSTM1-203ENST00000422245 CSRNP1Q96S65 589 aa14.54□□□□□ -0.08
SQSTM1-203ENST00000422245 MCOLN1Q9GZU1 580 aa14.54□□□□□ -0.08
SQSTM1-203ENST00000422245 RNF186Q9NXI6 227 aa14.54□□□□□ -0.08
SQSTM1-203ENST00000422245 FAM205AQ6ZU69 1335 aa14.54□□□□□ -0.08
SQSTM1-203ENST00000422245 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 F8W031 263 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 TRPA1O75762 1119 aa14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 ALDH1L2Q3SY69 923 aa14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 CFAP100Q494V2 611 aa14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 ANKRD44Q8N8A2 993 aa14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 TDRD7Q8NHU6 1098 aaKnown RBP14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 PUS3Q9BZE2 481 aaKnown RBP14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 DEFB129Q9H1M3 183 aa14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 RIPOR2Q9Y4F9 1068 aa14.53□□□□□ -0.08
SQSTM1-203ENST00000422245 HIBADHP31937 336 aaKnown RBP14.52□□□□□ -0.09
SQSTM1-203ENST00000422245 DGKZQ13574 1117 aa14.52□□□□□ -0.09
SQSTM1-203ENST00000422245 MFSD14BQ5SR56 506 aa14.52□□□□□ -0.09
SQSTM1-203ENST00000422245 SMC4Q9NTJ3 1288 aa14.52□□□□□ -0.09
SQSTM1-203ENST00000422245 JAG2Q9Y219 1238 aa14.52□□□□□ -0.09
SQSTM1-203ENST00000422245 CT47B1P0C2W7 299 aaPredicted RBP14.51□□□□□ -0.09
SQSTM1-203ENST00000422245 GYG1P46976 350 aa14.51□□□□□ -0.09
SQSTM1-203ENST00000422245 METTL24Q5JXM2 366 aa14.51□□□□□ -0.09
SQSTM1-203ENST00000422245 FAM84BQ96KN1 310 aaPredicted RBP14.51□□□□□ -0.09
SQSTM1-203ENST00000422245 CLRN2A0PK11 232 aa14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 CCDC85CA6NKD9 419 aa14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 PTPN12Q05209 780 aaKnown RBP14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 SREBF2Q12772 1141 aa14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 TNFAIP1Q13829 316 aa14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 LDLRAD1Q5T700 205 aa14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 USP44Q9H0E7 712 aa14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 VEZTQ9HBM0 779 aa14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 SERPINA10Q9UK55 444 aa14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 ANGEL1Q9UNK9 670 aaKnown RBP14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 SSC5DA1L4H1 1573 aa14.5□□□□□ -0.09
SQSTM1-203ENST00000422245 KIF16BQ96L93 1317 aa14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 CCER2I3L3R5 266 aa14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 PPP1R12BO60237 982 aaPredicted RBP14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 RBM5P52756 815 aaKnown RBP eCLIP14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 PRKG1Q13976 671 aa14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 MAP3K11Q16584 847 aa14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 SUPT20HL1Q3ZLR7 823 aa14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 LRRC24Q50LG9 513 aa14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 CAVIN4Q5BKX8 364 aa14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 TRMT2AQ8IZ69 625 aaKnown RBP14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 VGLL2Q8N8G2 317 aa14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 CDCA7LQ96GN5 454 aa14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 PRMT6Q96LA8 375 aaPredicted RBP14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 TTF2Q9UNY4 1162 aaKnown RBP14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 PCDHAC2Q9Y5I4 1007 aa14.49□□□□□ -0.09
SQSTM1-203ENST00000422245 LAMB1P07942 1786 aa14.48□□□□□ -0.09
SQSTM1-203ENST00000422245 UNCXA6NJT0 531 aa14.48□□□□□ -0.09
SQSTM1-203ENST00000422245 PDE8BO95263 885 aa14.48□□□□□ -0.09
SQSTM1-203ENST00000422245 PUM3Q15397 648 aaKnown RBP14.48□□□□□ -0.09
SQSTM1-203ENST00000422245 SPDYE2Q495Y8 402 aa14.48□□□□□ -0.09
SQSTM1-203ENST00000422245 FBXO33Q7Z6M2 555 aa14.48□□□□□ -0.09
SQSTM1-203ENST00000422245 TBC1D22AQ8WUA7 517 aa14.48□□□□□ -0.09
SQSTM1-203ENST00000422245 AOX1Q06278 1338 aa14.47□□□□□ -0.09
SQSTM1-203ENST00000422245 TM4SF4P48230 202 aa14.47□□□□□ -0.09
SQSTM1-203ENST00000422245 SPRYD7Q5W111 196 aa14.47□□□□□ -0.09
SQSTM1-203ENST00000422245 CTU1Q7Z7A3 348 aaKnown RBP14.47□□□□□ -0.09
SQSTM1-203ENST00000422245 FRAT2O75474 233 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 IFIT1P09914 478 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 UBTFL1P0CB47 393 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 ZBTB48P10074 688 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 CRKP46108 304 aa14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 IREB2P48200 963 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 RGS19P49795 217 aa14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 MKRN3Q13064 507 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 CHAF1AQ13111 956 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 RASA3Q14644 834 aa14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 NOM1Q5C9Z4 860 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 KLHDC4Q8TBB5 520 aa14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 CFHR5Q9BXR6 569 aa14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 API5Q9BZZ5 524 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 ZNF70Q9UC06 446 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-203ENST00000422245 MAST3O60307 1309 aa14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 MANSC4A6NHS7 340 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 EYA2O00167 538 aa14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 ALDH1A1P00352 501 aa14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 FGFR2P21802 821 aa14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 RFX5P48382 616 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 HDLBPQ00341 1268 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms