RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 WDR33Q9C0J8 1336 aaKnown RBP12.04□□□□□ -0.48
CTSA-205ENST00000419493 IRS2Q9Y4H2 1338 aa12.04□□□□□ -0.48
CTSA-205ENST00000419493 POLR2AP24928 1970 aaKnown RBP12.03□□□□□ -0.48
CTSA-205ENST00000419493 PSME4Q14997 1843 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 WNT10BO00744 389 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 SRGAP3O43295 1099 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 HSPA1AP0DMV8 641 aaKnown RBP12.03□□□□□ -0.48
CTSA-205ENST00000419493 HSPA1BP0DMV9 641 aaKnown RBP12.03□□□□□ -0.48
CTSA-205ENST00000419493 SLC5A1P13866 664 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 BCAMP50895 628 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 CHAF1AQ13111 956 aaPredicted RBP12.03□□□□□ -0.48
CTSA-205ENST00000419493 DLGAP5Q15398 846 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 MFSD14BQ5SR56 506 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 CYP4F22Q6NT55 531 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 SAPCD2Q86UD0 394 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 DZIP1LQ8IYY4 767 aaKnown RBP12.03□□□□□ -0.48
CTSA-205ENST00000419493 TDRD7Q8NHU6 1098 aaKnown RBP12.03□□□□□ -0.48
CTSA-205ENST00000419493 CAPNS2Q96L46 248 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 GBA2Q9HCG7 927 aaPredicted RBP12.03□□□□□ -0.48
CTSA-205ENST00000419493 PA2G4Q9UQ80 394 aaKnown RBP12.03□□□□□ -0.48
CTSA-205ENST00000419493 TRPM7Q96QT4 1865 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 ZNF609O15014 1411 aa12.03□□□□□ -0.48
CTSA-205ENST00000419493 MYO1BO43795 1136 aa12.02□□□□□ -0.49
CTSA-205ENST00000419493 GNAI2P04899 355 aa12.02□□□□□ -0.49
CTSA-205ENST00000419493 HUNKP57058 714 aa12.02□□□□□ -0.49
CTSA-205ENST00000419493 FBXO33Q7Z6M2 555 aa12.02□□□□□ -0.49
CTSA-205ENST00000419493 ITPRIPQ8IWB1 547 aa12.02□□□□□ -0.49
CTSA-205ENST00000419493 CERS5Q8N5B7 392 aa12.02□□□□□ -0.49
CTSA-205ENST00000419493 VGLL2Q8N8G2 317 aa12.02□□□□□ -0.49
CTSA-205ENST00000419493 LPIN2Q92539 896 aa12.02□□□□□ -0.49
CTSA-205ENST00000419493 AIDAQ96BJ3 306 aa12.02□□□□□ -0.49
CTSA-205ENST00000419493 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
CTSA-205ENST00000419493 A0A1B0GUL6 1792 aa12.01□□□□□ -0.49
CTSA-205ENST00000419493 CIAO1O76071 339 aa12.01□□□□□ -0.49
CTSA-205ENST00000419493 IL15P40933 162 aaPredicted RBP12.01□□□□□ -0.49
CTSA-205ENST00000419493 FKBP1AP62942 108 aaKnown RBP12.01□□□□□ -0.49
CTSA-205ENST00000419493 TTLL12Q14166 644 aaPredicted RBP12.01□□□□□ -0.49
CTSA-205ENST00000419493 PRAMEF18Q5VWM3 479 aa12.01□□□□□ -0.49
CTSA-205ENST00000419493 ATG9AQ7Z3C6 839 aa12.01□□□□□ -0.49
CTSA-205ENST00000419493 CDCA5Q96FF9 252 aa12.01□□□□□ -0.49
CTSA-205ENST00000419493 TTF2Q9UNY4 1162 aaKnown RBP12.01□□□□□ -0.49
CTSA-205ENST00000419493 PITPNM2Q9BZ72 1349 aa12.01□□□□□ -0.49
CTSA-205ENST00000419493 FGFR2P21802 821 aa12□□□□□ -0.49
CTSA-205ENST00000419493 NF2P35240 595 aa12□□□□□ -0.49
CTSA-205ENST00000419493 ATP2B3Q16720 1220 aa12□□□□□ -0.49
CTSA-205ENST00000419493 CFAP100Q494V2 611 aa12□□□□□ -0.49
CTSA-205ENST00000419493 BEGAINQ9BUH8 593 aa12□□□□□ -0.49
CTSA-205ENST00000419493 COPRSQ9NQ92 184 aa12□□□□□ -0.49
CTSA-205ENST00000419493 FAM205AQ6ZU69 1335 aa12□□□□□ -0.49
CTSA-205ENST00000419493 MAP2K1Q02750 393 aaPredicted RBP11.99□□□□□ -0.49
CTSA-205ENST00000419493 G3BP1Q13283 466 aaKnown RBP eCLIP11.99□□□□□ -0.49
CTSA-205ENST00000419493 APOBEC3FQ8IUX4 373 aaKnown RBP11.99□□□□□ -0.49
CTSA-205ENST00000419493 TBC1D22AQ8WUA7 517 aa11.99□□□□□ -0.49
CTSA-205ENST00000419493 VEZTQ9HBM0 779 aa11.99□□□□□ -0.49
CTSA-205ENST00000419493 GNL3LQ9NVN8 582 aaKnown RBP11.99□□□□□ -0.49
CTSA-205ENST00000419493 PCDHAC2Q9Y5I4 1007 aa11.99□□□□□ -0.49
CTSA-205ENST00000419493 CLRN2A0PK11 232 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 AOC2O75106 756 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 MS4A1P11836 297 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 ZNF157P51786 506 aaPredicted RBP11.98□□□□□ -0.49
CTSA-205ENST00000419493 OS9Q13438 667 aaPredicted RBP11.98□□□□□ -0.49
CTSA-205ENST00000419493 MTX1Q13505 466 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 PRKG1Q13976 671 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 RGMBQ6NW40 437 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 MTMR14Q8NCE2 650 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 HHIPL1Q96JK4 782 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 PRMT6Q96LA8 375 aaPredicted RBP11.98□□□□□ -0.49
CTSA-205ENST00000419493 NEUROD6Q96NK8 337 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 C1orf115Q9H7X2 142 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 AKAP2Q9Y2D5 859 aa11.98□□□□□ -0.49
CTSA-205ENST00000419493 CEP350Q5VT06 3117 aa11.97□□□□□ -0.49
CTSA-205ENST00000419493 PNMA6EA0A0J9YXQ4 647 aa11.97□□□□□ -0.49
CTSA-205ENST00000419493 SPDYE2BA6NHP3 402 aa11.97□□□□□ -0.49
CTSA-205ENST00000419493 SPDYE6P0CI01 402 aa11.97□□□□□ -0.49
CTSA-205ENST00000419493 RLBP1P12271 317 aa11.97□□□□□ -0.49
CTSA-205ENST00000419493 MAP2K2P36507 400 aa11.97□□□□□ -0.49
CTSA-205ENST00000419493 TIMM10P62072 90 aa11.97□□□□□ -0.49
CTSA-205ENST00000419493 TFCP2Q12800 502 aa11.97□□□□□ -0.49
CTSA-205ENST00000419493 PANK1Q8TE04 598 aa11.97□□□□□ -0.49
CTSA-205ENST00000419493 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.97□□□□□ -0.49
CTSA-205ENST00000419493 ZBTB7BO15156 539 aaPredicted RBP11.96□□□□□ -0.49
CTSA-205ENST00000419493 FOXN1O15353 648 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 CRKP46108 304 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 FKBP1BP68106 108 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 GORABQ5T7V8 394 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 WDR66Q8TBY9 1149 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 TEKT1Q969V4 418 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 ZBED3Q96IU2 234 aaPredicted RBP11.96□□□□□ -0.49
CTSA-205ENST00000419493 DEFB129Q9H1M3 183 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
CTSA-205ENST00000419493 WBP1LQ9NX94 342 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 SERPINA10Q9UK55 444 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 RCAN3Q9UKA8 241 aa11.96□□□□□ -0.49
CTSA-205ENST00000419493 ZNF646O15015 1829 aaPredicted RBP11.95□□□□□ -0.5
CTSA-205ENST00000419493 MAST3O60307 1309 aa11.95□□□□□ -0.5
CTSA-205ENST00000419493 A0A1B0GUL7 405 aa11.95□□□□□ -0.5
CTSA-205ENST00000419493 UBE2Q2LH0YL09 131 aa11.95□□□□□ -0.5
CTSA-205ENST00000419493 PHKA1P46020 1223 aa11.95□□□□□ -0.5
CTSA-205ENST00000419493 CTCFP49711 727 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms