RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 SULF1Q8IWU6 871 aa16.18■□□□□ 0.18
HLA-DMB-258ENST00000418107 ZC3H12CQ9C0D7 883 aaKnown RBP16.18■□□□□ 0.18
HLA-DMB-258ENST00000418107 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
HLA-DMB-258ENST00000418107 RNF186Q9NXI6 227 aa16.18■□□□□ 0.18
HLA-DMB-258ENST00000418107 SAGE1Q9NXZ1 904 aa16.18■□□□□ 0.18
HLA-DMB-258ENST00000418107 SCN9AQ15858 1988 aa16.17■□□□□ 0.18
HLA-DMB-258ENST00000418107 TRPA1O75762 1119 aa16.17■□□□□ 0.18
HLA-DMB-258ENST00000418107 UFL1O94874 794 aa16.17■□□□□ 0.18
HLA-DMB-258ENST00000418107 G3BP1Q13283 466 aaKnown RBP eCLIP16.17■□□□□ 0.18
HLA-DMB-258ENST00000418107 CDCA5Q96FF9 252 aa16.17■□□□□ 0.18
HLA-DMB-258ENST00000418107 KAZALD1Q96I82 304 aa16.17■□□□□ 0.18
HLA-DMB-258ENST00000418107 PODXL2Q9NZ53 605 aa16.17■□□□□ 0.18
HLA-DMB-258ENST00000418107 G3V3G9 751 aa16.16■□□□□ 0.18
HLA-DMB-258ENST00000418107 SLC10A3P09131 477 aa16.16■□□□□ 0.18
HLA-DMB-258ENST00000418107 EPHA10Q5JZY3 1008 aa16.16■□□□□ 0.18
HLA-DMB-258ENST00000418107 DCAF8Q5TAQ9 597 aa16.16■□□□□ 0.18
HLA-DMB-258ENST00000418107 BACH2Q9BYV9 841 aa16.16■□□□□ 0.18
HLA-DMB-258ENST00000418107 ANKIB1Q9P2G1 1089 aa16.16■□□□□ 0.18
HLA-DMB-258ENST00000418107 GGA1Q9UJY5 639 aa16.16■□□□□ 0.18
HLA-DMB-258ENST00000418107 PCCAP05165 728 aaPredicted RBP16.15■□□□□ 0.18
HLA-DMB-258ENST00000418107 CASP7P55210 303 aa16.15■□□□□ 0.18
HLA-DMB-258ENST00000418107 ZBTB38Q8NAP3 1195 aaPredicted RBP16.15■□□□□ 0.18
HLA-DMB-258ENST00000418107 KIF1BPQ96EK5 621 aa16.15■□□□□ 0.18
HLA-DMB-258ENST00000418107 PA2G4Q9UQ80 394 aaKnown RBP16.15■□□□□ 0.18
HLA-DMB-258ENST00000418107 RBM19Q9Y4C8 960 aaKnown RBP16.15■□□□□ 0.18
HLA-DMB-258ENST00000418107 TNRC18O15417 2968 aaPredicted RBP16.15■□□□□ 0.18
HLA-DMB-258ENST00000418107 MYH3P11055 1940 aa16.15■□□□□ 0.18
HLA-DMB-258ENST00000418107 SOX10P56693 466 aa16.14■□□□□ 0.17
HLA-DMB-258ENST00000418107 ZNF280AP59817 542 aaPredicted RBP16.14■□□□□ 0.17
HLA-DMB-258ENST00000418107 SCARF1Q14162 830 aa16.14■□□□□ 0.17
HLA-DMB-258ENST00000418107 ANGEL2Q5VTE6 544 aaKnown RBP16.14■□□□□ 0.17
HLA-DMB-258ENST00000418107 RSBN1LQ6PCB5 846 aaPredicted RBP16.14■□□□□ 0.17
HLA-DMB-258ENST00000418107 LMBR1LQ6UX01 489 aa16.14■□□□□ 0.17
HLA-DMB-258ENST00000418107 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
HLA-DMB-258ENST00000418107 CCDC85AQ96PX6 553 aaPredicted RBP16.14■□□□□ 0.17
HLA-DMB-258ENST00000418107 CSRNP1Q96S65 589 aa16.14■□□□□ 0.17
HLA-DMB-258ENST00000418107 RASAL3Q86YV0 1011 aa16.13■□□□□ 0.17
HLA-DMB-258ENST00000418107 PLEKHM2Q8IWE5 1019 aa16.13■□□□□ 0.17
HLA-DMB-258ENST00000418107 RHPN1Q8TCX5 695 aa16.13■□□□□ 0.17
HLA-DMB-258ENST00000418107 SIL1Q9H173 461 aa16.13■□□□□ 0.17
HLA-DMB-258ENST00000418107 NOP58Q9Y2X3 529 aaKnown RBP16.13■□□□□ 0.17
HLA-DMB-258ENST00000418107 FOXO4P98177 505 aa16.13■□□□□ 0.17
HLA-DMB-258ENST00000418107 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
HLA-DMB-258ENST00000418107 AGBL3Q8NEM8 1001 aa16.13■□□□□ 0.17
HLA-DMB-258ENST00000418107 IL1RAPL2Q9NP60 686 aa16.13■□□□□ 0.17
HLA-DMB-258ENST00000418107 PDE4DIPQ5VU43 2346 aa16.12■□□□□ 0.17
HLA-DMB-258ENST00000418107 ZNF609O15014 1411 aa16.12■□□□□ 0.17
HLA-DMB-258ENST00000418107 HSP90B1P14625 803 aaKnown RBP16.12■□□□□ 0.17
HLA-DMB-258ENST00000418107 RABL6Q3YEC7 729 aaPredicted RBP16.12■□□□□ 0.17
HLA-DMB-258ENST00000418107 OTUD7AQ8TE49 926 aaPredicted RBP16.12■□□□□ 0.17
HLA-DMB-258ENST00000418107 SCAF8Q9UPN6 1271 aaKnown RBP16.12■□□□□ 0.17
HLA-DMB-258ENST00000418107 AKAP11Q9UKA4 1901 aa16.11■□□□□ 0.17
HLA-DMB-258ENST00000418107 PDE8AO60658 829 aa16.11■□□□□ 0.17
HLA-DMB-258ENST00000418107 USP17L8P0C7I0 530 aa16.11■□□□□ 0.17
HLA-DMB-258ENST00000418107 C8orf34Q49A92 452 aa16.11■□□□□ 0.17
HLA-DMB-258ENST00000418107 GMLQ99445 158 aa16.11■□□□□ 0.17
HLA-DMB-258ENST00000418107 MYOZ2Q9NPC6 264 aa16.11■□□□□ 0.17
HLA-DMB-258ENST00000418107 XDHP47989 1333 aa16.11■□□□□ 0.17
HLA-DMB-258ENST00000418107 TAF7LQ5H9L4 462 aa16.1■□□□□ 0.17
HLA-DMB-258ENST00000418107 MOB2Q70IA6 237 aa16.1■□□□□ 0.17
HLA-DMB-258ENST00000418107 CTU1Q7Z7A3 348 aaKnown RBP16.1■□□□□ 0.17
HLA-DMB-258ENST00000418107 ANKRD18AQ8IVF6 992 aa16.1■□□□□ 0.17
HLA-DMB-258ENST00000418107 CLASRPQ8N2M8 674 aaKnown RBP16.1■□□□□ 0.17
HLA-DMB-258ENST00000418107 KLHDC4Q8TBB5 520 aa16.1■□□□□ 0.17
HLA-DMB-258ENST00000418107 PAPPA2Q9BXP8 1791 aa16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 USP17L3A6NCW0 530 aa16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 USP17L4A6NCW7 530 aa16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 WTIPA6NIX2 430 aaPredicted RBP16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 FKBP1BP68106 108 aa16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 CCDC57Q2TAC2 916 aa16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 BMP2KLQ5H9B9 411 aa16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 USP17L1Q7RTZ2 530 aa16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 REM2Q8IYK8 340 aaPredicted RBP16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 PLA2G12BQ9BX93 195 aa16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 COPRSQ9NQ92 184 aa16.09■□□□□ 0.17
HLA-DMB-258ENST00000418107 IFIT2P09913 472 aaKnown RBP16.08■□□□□ 0.16
HLA-DMB-258ENST00000418107 MX1P20591 662 aa16.08■□□□□ 0.16
HLA-DMB-258ENST00000418107 ATP2B4P23634 1241 aa16.08■□□□□ 0.16
HLA-DMB-258ENST00000418107 PDE1AP54750 535 aa16.08■□□□□ 0.16
HLA-DMB-258ENST00000418107 PSME4Q14997 1843 aa16.08■□□□□ 0.16
HLA-DMB-258ENST00000418107 TTC22Q5TAA0 569 aa16.08■□□□□ 0.16
HLA-DMB-258ENST00000418107 PRAMEF18Q5VWM3 479 aa16.08■□□□□ 0.16
HLA-DMB-258ENST00000418107 PITPNM2Q9BZ72 1349 aa16.08■□□□□ 0.16
HLA-DMB-258ENST00000418107 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
HLA-DMB-258ENST00000418107 RFX5P48382 616 aaPredicted RBP16.07■□□□□ 0.16
HLA-DMB-258ENST00000418107 PTPN12Q05209 780 aaKnown RBP16.07■□□□□ 0.16
HLA-DMB-258ENST00000418107 NBPF9Q3BBW0 867 aa16.07■□□□□ 0.16
HLA-DMB-258ENST00000418107 PODNQ7Z5L7 613 aa16.07■□□□□ 0.16
HLA-DMB-258ENST00000418107 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
HLA-DMB-258ENST00000418107 MXD3Q9BW11 206 aa16.07■□□□□ 0.16
HLA-DMB-258ENST00000418107 SPEF2Q9C093 1822 aa16.07■□□□□ 0.16
HLA-DMB-258ENST00000418107 CTSWP56202 376 aa16.06■□□□□ 0.16
HLA-DMB-258ENST00000418107 IFIT5Q13325 482 aaKnown RBP16.06■□□□□ 0.16
HLA-DMB-258ENST00000418107 AACSQ86V21 672 aa16.06■□□□□ 0.16
HLA-DMB-258ENST00000418107 TBC1D8O95759 1140 aa16.05■□□□□ 0.16
HLA-DMB-258ENST00000418107 TTLL12Q14166 644 aaPredicted RBP16.05■□□□□ 0.16
HLA-DMB-258ENST00000418107 FBXW7Q969H0 707 aa16.05■□□□□ 0.16
HLA-DMB-258ENST00000418107 CDC5LQ99459 802 aaKnown RBP16.05■□□□□ 0.16
HLA-DMB-258ENST00000418107 UPF2Q9HAU5 1272 aaKnown RBP16.05■□□□□ 0.16
HLA-DMB-258ENST00000418107 HPS5Q9UPZ3 1129 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms