RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 CCDC125Q86Z20 511 aa20.39■□□□□ 0.86
CALD1-204ENST00000417172 ZNF622Q969S3 477 aaKnown RBP eCLIP20.39■□□□□ 0.86
CALD1-204ENST00000417172 SNX21Q969T3 373 aa20.39■□□□□ 0.86
CALD1-204ENST00000417172 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.39■□□□□ 0.86
CALD1-204ENST00000417172 GNL3LQ9NVN8 582 aaKnown RBP20.39■□□□□ 0.86
CALD1-204ENST00000417172 ZFYP08048 801 aaPredicted RBP20.39■□□□□ 0.85
CALD1-204ENST00000417172 CREB3L3Q68CJ9 461 aa20.39■□□□□ 0.85
CALD1-204ENST00000417172 APPBP2Q92624 585 aa20.39■□□□□ 0.85
CALD1-204ENST00000417172 LEMD3Q9Y2U8 911 aa20.39■□□□□ 0.85
CALD1-204ENST00000417172 TCRBV5S4A2TA0A5A2 114 aa20.38■□□□□ 0.85
CALD1-204ENST00000417172 COL9A3Q14050 684 aaPredicted RBP20.38■□□□□ 0.85
CALD1-204ENST00000417172 ADCK5Q3MIX3 580 aa20.38■□□□□ 0.85
CALD1-204ENST00000417172 MAGEB6Q8N7X4 407 aa20.38■□□□□ 0.85
CALD1-204ENST00000417172 MASTLQ96GX5 879 aa20.38■□□□□ 0.85
CALD1-204ENST00000417172 ABCF2Q9UG63 623 aa20.38■□□□□ 0.85
CALD1-204ENST00000417172 POLLQ9UGP5 575 aa20.38■□□□□ 0.85
CALD1-204ENST00000417172 DUOX1Q9NRD9 1551 aa20.37■□□□□ 0.85
CALD1-204ENST00000417172 A0A0G2JLW4 131 aa20.37■□□□□ 0.85
CALD1-204ENST00000417172 SLC27A2O14975 620 aa20.37■□□□□ 0.85
CALD1-204ENST00000417172 FRAT2O75474 233 aaPredicted RBP20.37■□□□□ 0.85
CALD1-204ENST00000417172 CPA1P15085 419 aa20.37■□□□□ 0.85
CALD1-204ENST00000417172 NEK4P51957 841 aa20.37■□□□□ 0.85
CALD1-204ENST00000417172 TICAM2Q86XR7 235 aa20.37■□□□□ 0.85
CALD1-204ENST00000417172 IL17RAQ96F46 866 aa20.37■□□□□ 0.85
CALD1-204ENST00000417172 FOXP2O15409 715 aa20.37■□□□□ 0.85
CALD1-204ENST00000417172 LRRFIP1Q32MZ4 808 aaKnown RBP20.37■□□□□ 0.85
CALD1-204ENST00000417172 GGA1Q9UJY5 639 aa20.37■□□□□ 0.85
CALD1-204ENST00000417172 ATP6V0A2Q9Y487 856 aa20.37■□□□□ 0.85
CALD1-204ENST00000417172 HSPD1P10809 573 aaKnown RBP20.36■□□□□ 0.85
CALD1-204ENST00000417172 CHAF1AQ13111 956 aaPredicted RBP20.36■□□□□ 0.85
CALD1-204ENST00000417172 SP8Q8IXZ3 490 aa20.36■□□□□ 0.85
CALD1-204ENST00000417172 LRP2BPQ9P2M1 347 aa20.36■□□□□ 0.85
CALD1-204ENST00000417172 GPAA1O43292 621 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 ZBTB7AO95365 584 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 MAP3K12Q12852 859 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 ZSCAN25Q6NSZ9 544 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 TBC1D16Q8TBP0 767 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 KCNB2Q92953 911 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 DENND2AQ9ULE3 1009 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 CHD4Q14839 1912 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 H0YIN7 160 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 UBE3CQ15386 1083 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 SLKQ9H2G2 1235 aaPredicted RBP20.35■□□□□ 0.85
CALD1-204ENST00000417172 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 LAMA4Q16363 1823 aa20.35■□□□□ 0.85
CALD1-204ENST00000417172 ATP2B4P23634 1241 aa20.34■□□□□ 0.85
CALD1-204ENST00000417172 ALDH1B1P30837 517 aa20.34■□□□□ 0.85
CALD1-204ENST00000417172 ZNF219Q9P2Y4 722 aaPredicted RBP20.34■□□□□ 0.85
CALD1-204ENST00000417172 DLEC1Q9Y238 1755 aa20.33■□□□□ 0.85
CALD1-204ENST00000417172 C6orf229H3BNL8 230 aa20.33■□□□□ 0.85
CALD1-204ENST00000417172 K7ELQ4 463 aaPredicted RBP20.33■□□□□ 0.85
CALD1-204ENST00000417172 NOL8Q76FK4 1167 aaKnown RBP20.33■□□□□ 0.85
CALD1-204ENST00000417172 ADGRA1Q86SQ6 560 aa20.33■□□□□ 0.85
CALD1-204ENST00000417172 UPF1Q92900 1129 aaKnown RBP eCLIP20.33■□□□□ 0.85
CALD1-204ENST00000417172 JAKMIP1Q96N16 626 aaKnown RBP20.33■□□□□ 0.85
CALD1-204ENST00000417172 C10orf71Q711Q0 1435 aa20.33■□□□□ 0.85
CALD1-204ENST00000417172 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.85
CALD1-204ENST00000417172 CASTP20810 708 aaKnown RBP20.33■□□□□ 0.84
CALD1-204ENST00000417172 TTLL5Q6EMB2 1281 aa20.33■□□□□ 0.84
CALD1-204ENST00000417172 ZNF384Q8TF68 577 aa20.33■□□□□ 0.84
CALD1-204ENST00000417172 DSCC1Q9BVC3 393 aa20.33■□□□□ 0.84
CALD1-204ENST00000417172 RAI14Q9P0K7 980 aa20.33■□□□□ 0.84
CALD1-204ENST00000417172 SEMA3EO15041 775 aa20.32■□□□□ 0.84
CALD1-204ENST00000417172 ST18O60284 1047 aa20.32■□□□□ 0.84
CALD1-204ENST00000417172 CYP21A2P08686 494 aa20.32■□□□□ 0.84
CALD1-204ENST00000417172 ERICH6Q7L0X2 663 aa20.32■□□□□ 0.84
CALD1-204ENST00000417172 TMC4Q7Z404 712 aa20.32■□□□□ 0.84
CALD1-204ENST00000417172 FOXD4L1Q9NU39 408 aa20.32■□□□□ 0.84
CALD1-204ENST00000417172 U3KPZ7 1027 aaPredicted RBP20.32■□□□□ 0.84
CALD1-204ENST00000417172 R3HDM1Q15032 1099 aaKnown RBP20.31■□□□□ 0.84
CALD1-204ENST00000417172 C15orf52Q6ZUT6 534 aaKnown RBP20.31■□□□□ 0.84
CALD1-204ENST00000417172 ZNF804AQ7Z570 1209 aa20.31■□□□□ 0.84
CALD1-204ENST00000417172 ATF5Q9Y2D1 282 aaPredicted RBP20.31■□□□□ 0.84
CALD1-204ENST00000417172 RIMBP2O15034 1052 aa20.31■□□□□ 0.84
CALD1-204ENST00000417172 ZKSCAN1P17029 563 aaPredicted RBP20.31■□□□□ 0.84
CALD1-204ENST00000417172 PRDX5P30044 214 aa20.31■□□□□ 0.84
CALD1-204ENST00000417172 STYK1Q6J9G0 422 aa20.31■□□□□ 0.84
CALD1-204ENST00000417172 MIGA1Q8NAN2 632 aa20.31■□□□□ 0.84
CALD1-204ENST00000417172 TDRD7Q8NHU6 1098 aaKnown RBP20.31■□□□□ 0.84
CALD1-204ENST00000417172 SLC16A10Q8TF71 515 aa20.31■□□□□ 0.84
CALD1-204ENST00000417172 MAST2Q6P0Q8 1798 aa20.31■□□□□ 0.84
CALD1-204ENST00000417172 RPAP1Q9BWH6 1393 aaPredicted RBP20.3■□□□□ 0.84
CALD1-204ENST00000417172 MBD4O95243 580 aa20.3■□□□□ 0.84
CALD1-204ENST00000417172 MPNDQ8N594 471 aa20.3■□□□□ 0.84
CALD1-204ENST00000417172 ARMT1Q9H993 441 aa20.3■□□□□ 0.84
CALD1-204ENST00000417172 KIF13BQ9NQT8 1826 aa20.3■□□□□ 0.84
CALD1-204ENST00000417172 CYP7A1P22680 504 aa20.29■□□□□ 0.84
CALD1-204ENST00000417172 RNF20Q5VTR2 975 aa20.29■□□□□ 0.84
CALD1-204ENST00000417172 AIDAQ96BJ3 306 aa20.29■□□□□ 0.84
CALD1-204ENST00000417172 LARP6Q9BRS8 491 aaKnown RBP20.29■□□□□ 0.84
CALD1-204ENST00000417172 CD209Q9NNX6 404 aa20.29■□□□□ 0.84
CALD1-204ENST00000417172 GRIK5Q16478 980 aa20.29■□□□□ 0.84
CALD1-204ENST00000417172 DPP8Q6V1X1 898 aaPredicted RBP20.29■□□□□ 0.84
CALD1-204ENST00000417172 STOX1Q6ZVD7 989 aa20.29■□□□□ 0.84
CALD1-204ENST00000417172 LCORLQ8N3X6 602 aa20.29■□□□□ 0.84
CALD1-204ENST00000417172 TCEANC2Q96MN5 208 aa20.29■□□□□ 0.84
CALD1-204ENST00000417172 TTC14Q96N46 770 aa20.29■□□□□ 0.84
CALD1-204ENST00000417172 PDS5AQ29RF7 1337 aaKnown RBP20.29■□□□□ 0.84
CALD1-204ENST00000417172 STRBPQ96SI9 672 aaKnown RBP20.28■□□□□ 0.84
CALD1-204ENST00000417172 FGAP02671 866 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms