RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 DLGAP5Q15398 846 aa27.53■■■□□ 2
ACTB-203ENST00000417101 MRPL50Q8N5N7 158 aaKnown RBP27.53■■■□□ 2
ACTB-203ENST00000417101 A0A1B0GUL6 1792 aa27.53■■■□□ 2
ACTB-203ENST00000417101 F8W031 263 aaPredicted RBP27.52■■■□□ 2
ACTB-203ENST00000417101 JAG2Q9Y219 1238 aa27.52■■■□□ 2
ACTB-203ENST00000417101 REM2Q8IYK8 340 aaPredicted RBP27.51■■□□□ 1.99
ACTB-203ENST00000417101 PUS3Q9BZE2 481 aaKnown RBP27.51■■□□□ 1.99
ACTB-203ENST00000417101 UTYO14607 1347 aa27.5■■□□□ 1.99
ACTB-203ENST00000417101 E9PSI1 815 aa27.5■■□□□ 1.99
ACTB-203ENST00000417101 PRKG1Q13976 671 aa27.5■■□□□ 1.99
ACTB-203ENST00000417101 MTMR14Q8NCE2 650 aa27.49■■□□□ 1.99
ACTB-203ENST00000417101 BICC1Q9H694 974 aaKnown RBP27.49■■□□□ 1.99
ACTB-203ENST00000417101 PCDHAC2Q9Y5I4 1007 aa27.49■■□□□ 1.99
ACTB-203ENST00000417101 FKBP1AP62942 108 aaKnown RBP27.48■■□□□ 1.99
ACTB-203ENST00000417101 UBE4AQ14139 1066 aa27.48■■□□□ 1.99
ACTB-203ENST00000417101 CFAP100Q494V2 611 aa27.48■■□□□ 1.99
ACTB-203ENST00000417101 SSH1Q8WYL5 1049 aa27.48■■□□□ 1.99
ACTB-203ENST00000417101 DEFB129Q9H1M3 183 aa27.48■■□□□ 1.99
ACTB-203ENST00000417101 ARMC9Q7Z3E5 817 aa27.47■■□□□ 1.99
ACTB-203ENST00000417101 AKAP11Q9UKA4 1901 aa27.47■■□□□ 1.99
ACTB-203ENST00000417101 PTPRCP08575 1304 aa27.46■■□□□ 1.99
ACTB-203ENST00000417101 GYG1P46976 350 aa27.46■■□□□ 1.99
ACTB-203ENST00000417101 PTPN12Q05209 780 aaKnown RBP27.46■■□□□ 1.99
ACTB-203ENST00000417101 RIPOR2Q9Y4F9 1068 aa27.46■■□□□ 1.99
ACTB-203ENST00000417101 CLRN2A0PK11 232 aa27.45■■□□□ 1.98
ACTB-203ENST00000417101 SPDYE2BA6NHP3 402 aa27.45■■□□□ 1.98
ACTB-203ENST00000417101 SPDYE6P0CI01 402 aa27.45■■□□□ 1.98
ACTB-203ENST00000417101 HIBADHP31937 336 aaKnown RBP27.45■■□□□ 1.98
ACTB-203ENST00000417101 SLFN5Q08AF3 891 aa27.45■■□□□ 1.98
ACTB-203ENST00000417101 MKRN3Q13064 507 aaKnown RBP27.45■■□□□ 1.98
ACTB-203ENST00000417101 RABL6Q3YEC7 729 aaPredicted RBP27.45■■□□□ 1.98
ACTB-203ENST00000417101 FAM205AQ6ZU69 1335 aa27.44■■□□□ 1.98
ACTB-203ENST00000417101 MYO1BO43795 1136 aa27.44■■□□□ 1.98
ACTB-203ENST00000417101 ANKRD44Q8N8A2 993 aa27.44■■□□□ 1.98
ACTB-203ENST00000417101 TDRD7Q8NHU6 1098 aaKnown RBP27.44■■□□□ 1.98
ACTB-203ENST00000417101 FAM84BQ96KN1 310 aaPredicted RBP27.44■■□□□ 1.98
ACTB-203ENST00000417101 PRMT6Q96LA8 375 aaPredicted RBP27.44■■□□□ 1.98
ACTB-203ENST00000417101 ANGEL1Q9UNK9 670 aaKnown RBP27.44■■□□□ 1.98
ACTB-203ENST00000417101 FZD1Q9UP38 647 aa27.44■■□□□ 1.98
ACTB-203ENST00000417101 COL1A1P02452 1464 aaPredicted RBP27.44■■□□□ 1.98
ACTB-203ENST00000417101 MROH5Q6ZUA9 1318 aa27.43■■□□□ 1.98
ACTB-203ENST00000417101 RBM5P52756 815 aaKnown RBP eCLIP27.43■■□□□ 1.982e-6■■■■□ 19.9
ACTB-203ENST00000417101 AOX1Q06278 1338 aa27.42■■□□□ 1.98
ACTB-203ENST00000417101 LRRC24Q50LG9 513 aa27.42■■□□□ 1.98
ACTB-203ENST00000417101 MFSD14BQ5SR56 506 aa27.42■■□□□ 1.98
ACTB-203ENST00000417101 LDLRAD1Q5T700 205 aa27.42■■□□□ 1.98
ACTB-203ENST00000417101 VEZTQ9HBM0 779 aa27.42■■□□□ 1.98
ACTB-203ENST00000417101 CDCA7LQ96GN5 454 aa27.41■■□□□ 1.98
ACTB-203ENST00000417101 PPP2R3BQ9Y5P8 575 aa27.41■■□□□ 1.98
ACTB-203ENST00000417101 METTL24Q5JXM2 366 aa27.4■■□□□ 1.98
ACTB-203ENST00000417101 USP44Q9H0E7 712 aa27.4■■□□□ 1.98
ACTB-203ENST00000417101 TBC1D8O95759 1140 aa27.39■■□□□ 1.98
ACTB-203ENST00000417101 TM4SF4P48230 202 aa27.39■■□□□ 1.98
ACTB-203ENST00000417101 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.39■■□□□ 1.98
ACTB-203ENST00000417101 TTF2Q9UNY4 1162 aaKnown RBP27.39■■□□□ 1.98
ACTB-203ENST00000417101 ALDH1L2Q3SY69 923 aa27.38■■□□□ 1.97
ACTB-203ENST00000417101 VPS37DQ86XT2 251 aa27.38■■□□□ 1.97
ACTB-203ENST00000417101 KLHDC4Q8TBB5 520 aa27.38■■□□□ 1.97
ACTB-203ENST00000417101 IQSEC3Q9UPP2 1182 aaPredicted RBP27.38■■□□□ 1.97
ACTB-203ENST00000417101 SSC5DA1L4H1 1573 aa27.37■■□□□ 1.97
ACTB-203ENST00000417101 PPP1R12BO60237 982 aaPredicted RBP27.37■■□□□ 1.97
ACTB-203ENST00000417101 SREBF2Q12772 1141 aa27.37■■□□□ 1.97
ACTB-203ENST00000417101 SUPT20HL1Q3ZLR7 823 aa27.37■■□□□ 1.97
ACTB-203ENST00000417101 SPRYD7Q5W111 196 aa27.37■■□□□ 1.97
ACTB-203ENST00000417101 FBXO33Q7Z6M2 555 aa27.37■■□□□ 1.97
ACTB-203ENST00000417101 SMC4Q9NTJ3 1288 aa27.37■■□□□ 1.97
ACTB-203ENST00000417101 RGS19P49795 217 aa27.36■■□□□ 1.97
ACTB-203ENST00000417101 RASA3Q14644 834 aa27.36■■□□□ 1.97
ACTB-203ENST00000417101 MAP3K11Q16584 847 aa27.36■■□□□ 1.97
ACTB-203ENST00000417101 NBPF12Q5TAG4 269 aaPredicted RBP27.36■■□□□ 1.97
ACTB-203ENST00000417101 CTU1Q7Z7A3 348 aaKnown RBP27.36■■□□□ 1.97
ACTB-203ENST00000417101 VGLL2Q8N8G2 317 aa27.36■■□□□ 1.97
ACTB-203ENST00000417101 SLC10A4Q96EP9 437 aa27.36■■□□□ 1.97
ACTB-203ENST00000417101 SERPINA10Q9UK55 444 aa27.36■■□□□ 1.97
ACTB-203ENST00000417101 ECM29Q5VYK3 1845 aa27.35■■□□□ 1.97
ACTB-203ENST00000417101 PDE8BO95263 885 aa27.35■■□□□ 1.97
ACTB-203ENST00000417101 MLLT1Q03111 559 aaPredicted RBP27.35■■□□□ 1.97
ACTB-203ENST00000417101 CHAF1AQ13111 956 aaPredicted RBP27.35■■□□□ 1.97
ACTB-203ENST00000417101 CLMNQ96JQ2 1002 aa27.35■■□□□ 1.97
ACTB-203ENST00000417101 CAVIN4Q5BKX8 364 aa27.34■■□□□ 1.97
ACTB-203ENST00000417101 TDRD3Q9H7E2 651 aaKnown RBP27.34■■□□□ 1.97
ACTB-203ENST00000417101 ZNF70Q9UC06 446 aaPredicted RBP27.34■■□□□ 1.97
ACTB-203ENST00000417101 FRAT2O75474 233 aaPredicted RBP27.33■■□□□ 1.97
ACTB-203ENST00000417101 GRIK5Q16478 980 aa27.33■■□□□ 1.97
ACTB-203ENST00000417101 SPDYE2Q495Y8 402 aa27.33■■□□□ 1.97
ACTB-203ENST00000417101 DZIP1LQ8IYY4 767 aaKnown RBP27.33■■□□□ 1.97
ACTB-203ENST00000417101 TRMT2AQ8IZ69 625 aaKnown RBP27.33■■□□□ 1.97
ACTB-203ENST00000417101 ZNF296Q8WUU4 475 aaPredicted RBP27.33■■□□□ 1.97
ACTB-203ENST00000417101 CRKP46108 304 aa27.32■■□□□ 1.96
ACTB-203ENST00000417101 TNFAIP1Q13829 316 aa27.32■■□□□ 1.96
ACTB-203ENST00000417101 BCAMP50895 628 aa27.31■■□□□ 1.96
ACTB-203ENST00000417101 GPR25O00155 361 aa27.3■■□□□ 1.96
ACTB-203ENST00000417101 USP2O75604 605 aaPredicted RBP27.3■■□□□ 1.96
ACTB-203ENST00000417101 IREB2P48200 963 aaKnown RBP27.3■■□□□ 1.96
ACTB-203ENST00000417101 TBC1D22AQ8WUA7 517 aa27.3■■□□□ 1.96
ACTB-203ENST00000417101 WNK4Q96J92 1243 aa27.3■■□□□ 1.96
ACTB-203ENST00000417101 MANSC4A6NHS7 340 aaPredicted RBP27.29■■□□□ 1.96
ACTB-203ENST00000417101 UNCXA6NJT0 531 aa27.29■■□□□ 1.96
ACTB-203ENST00000417101 ZBTB48P10074 688 aaPredicted RBP27.29■■□□□ 1.96
ACTB-203ENST00000417101 RFX5P48382 616 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms