RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ALDH1L1O75891 902 aa18.78■□□□□ 0.6
RPS28-201ENST00000417088 TM4SF4P48230 202 aa18.78■□□□□ 0.6
RPS28-201ENST00000417088 TAF7LQ5H9L4 462 aa18.78■□□□□ 0.6
RPS28-201ENST00000417088 LDLRAD1Q5T700 205 aa18.78■□□□□ 0.6
RPS28-201ENST00000417088 SLC4A10Q6U841 1118 aa18.78■□□□□ 0.6
RPS28-201ENST00000417088 CTU1Q7Z7A3 348 aaKnown RBP18.78■□□□□ 0.6
RPS28-201ENST00000417088 DEFB129Q9H1M3 183 aa18.78■□□□□ 0.6
RPS28-201ENST00000417088 PCDHAC2Q9Y5I4 1007 aa18.78■□□□□ 0.6
RPS28-201ENST00000417088 TBC1D8O95759 1140 aa18.77■□□□□ 0.6
RPS28-201ENST00000417088 FKBP1AP62942 108 aaKnown RBP18.77■□□□□ 0.6
RPS28-201ENST00000417088 MKRN3Q13064 507 aaKnown RBP18.77■□□□□ 0.6
RPS28-201ENST00000417088 SRCIN1Q9C0H9 1055 aa18.77■□□□□ 0.6
RPS28-201ENST00000417088 CNNM1Q9NRU3 951 aa18.77■□□□□ 0.6
RPS28-201ENST00000417088 A0A1B0GUL6 1792 aa18.77■□□□□ 0.6
RPS28-201ENST00000417088 F8W031 263 aaPredicted RBP18.76■□□□□ 0.59
RPS28-201ENST00000417088 CFAP100Q494V2 611 aa18.76■□□□□ 0.59
RPS28-201ENST00000417088 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
RPS28-201ENST00000417088 SUCLG2Q96I99 432 aa18.76■□□□□ 0.59
RPS28-201ENST00000417088 ANGEL1Q9UNK9 670 aaKnown RBP18.76■□□□□ 0.59
RPS28-201ENST00000417088 FZD1Q9UP38 647 aa18.76■□□□□ 0.59
RPS28-201ENST00000417088 JAG2Q9Y219 1238 aa18.76■□□□□ 0.59
RPS28-201ENST00000417088 COL1A1P02452 1464 aaPredicted RBP18.76■□□□□ 0.59
RPS28-201ENST00000417088 ZNF296Q8WUU4 475 aaPredicted RBP18.75■□□□□ 0.59
RPS28-201ENST00000417088 PRMT6Q96LA8 375 aaPredicted RBP18.75■□□□□ 0.59
RPS28-201ENST00000417088 ZNF521Q96K83 1311 aa18.74■□□□□ 0.59
RPS28-201ENST00000417088 SPDYE2BA6NHP3 402 aa18.74■□□□□ 0.59
RPS28-201ENST00000417088 SPDYE6P0CI01 402 aa18.74■□□□□ 0.59
RPS28-201ENST00000417088 SPRYD7Q5W111 196 aa18.74■□□□□ 0.59
RPS28-201ENST00000417088 PUS3Q9BZE2 481 aaKnown RBP18.74■□□□□ 0.59
RPS28-201ENST00000417088 PPP2R3BQ9Y5P8 575 aa18.74■□□□□ 0.59
RPS28-201ENST00000417088 AOX1Q06278 1338 aa18.74■□□□□ 0.59
RPS28-201ENST00000417088 FAM205AQ6ZU69 1335 aa18.74■□□□□ 0.59
RPS28-201ENST00000417088 CLRN2A0PK11 232 aa18.73■□□□□ 0.59
RPS28-201ENST00000417088 NBPF7P0C2Y1 421 aaPredicted RBP18.73■□□□□ 0.59
RPS28-201ENST00000417088 SREBF2Q12772 1141 aa18.73■□□□□ 0.59
RPS28-201ENST00000417088 UBE4AQ14139 1066 aa18.73■□□□□ 0.59
RPS28-201ENST00000417088 MAP3K11Q16584 847 aa18.73■□□□□ 0.59
RPS28-201ENST00000417088 TDRD7Q8NHU6 1098 aaKnown RBP18.73■□□□□ 0.59
RPS28-201ENST00000417088 UTYO14607 1347 aa18.73■□□□□ 0.59
RPS28-201ENST00000417088 SSC5DA1L4H1 1573 aa18.72■□□□□ 0.59
RPS28-201ENST00000417088 GPR25O00155 361 aa18.72■□□□□ 0.59
RPS28-201ENST00000417088 MYO1BO43795 1136 aa18.72■□□□□ 0.59
RPS28-201ENST00000417088 GYG1P46976 350 aa18.72■□□□□ 0.59
RPS28-201ENST00000417088 NOM1Q5C9Z4 860 aaKnown RBP18.72■□□□□ 0.59
RPS28-201ENST00000417088 FAM84BQ96KN1 310 aaPredicted RBP18.72■□□□□ 0.59
RPS28-201ENST00000417088 PPP1R12BO60237 982 aaPredicted RBP18.71■□□□□ 0.59
RPS28-201ENST00000417088 HIBADHP31937 336 aaKnown RBP18.71■□□□□ 0.59
RPS28-201ENST00000417088 SOX10P56693 466 aa18.71■□□□□ 0.59
RPS28-201ENST00000417088 MRPL50Q8N5N7 158 aaKnown RBP18.71■□□□□ 0.59
RPS28-201ENST00000417088 SLC10A4Q96EP9 437 aa18.71■□□□□ 0.59
RPS28-201ENST00000417088 CLMNQ96JQ2 1002 aa18.71■□□□□ 0.59
RPS28-201ENST00000417088 CFHR5Q9BXR6 569 aa18.71■□□□□ 0.59
RPS28-201ENST00000417088 VEZTQ9HBM0 779 aa18.71■□□□□ 0.59
RPS28-201ENST00000417088 RIPOR2Q9Y4F9 1068 aa18.71■□□□□ 0.59
RPS28-201ENST00000417088 RBM5P52756 815 aaKnown RBP eCLIP18.7■□□□□ 0.58
RPS28-201ENST00000417088 PKN2Q16513 984 aaKnown RBP18.7■□□□□ 0.58
RPS28-201ENST00000417088 SUPT20HL1Q3ZLR7 823 aa18.7■□□□□ 0.58
RPS28-201ENST00000417088 MFSD14BQ5SR56 506 aa18.7■□□□□ 0.58
RPS28-201ENST00000417088 NBPF12Q5TAG4 269 aaPredicted RBP18.7■□□□□ 0.58
RPS28-201ENST00000417088 R3HDMLQ9H3Y0 253 aa18.7■□□□□ 0.58
RPS28-201ENST00000417088 HPS5Q9UPZ3 1129 aa18.7■□□□□ 0.58
RPS28-201ENST00000417088 RASA3Q14644 834 aa18.69■□□□□ 0.58
RPS28-201ENST00000417088 RABL6Q3YEC7 729 aaPredicted RBP18.69■□□□□ 0.58
RPS28-201ENST00000417088 BICC1Q9H694 974 aaKnown RBP18.69■□□□□ 0.58
RPS28-201ENST00000417088 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.69■□□□□ 0.58
RPS28-201ENST00000417088 ECM29Q5VYK3 1845 aa18.69■□□□□ 0.58
RPS28-201ENST00000417088 MROH5Q6ZUA9 1318 aa18.69■□□□□ 0.58
RPS28-201ENST00000417088 MANSC4A6NHS7 340 aaPredicted RBP18.68■□□□□ 0.58
RPS28-201ENST00000417088 ANKRD44Q8N8A2 993 aa18.68■□□□□ 0.58
RPS28-201ENST00000417088 WNK4Q96J92 1243 aa18.68■□□□□ 0.58
RPS28-201ENST00000417088 ZNF70Q9UC06 446 aaPredicted RBP18.68■□□□□ 0.58
RPS28-201ENST00000417088 SERPINA10Q9UK55 444 aa18.68■□□□□ 0.58
RPS28-201ENST00000417088 TTF2Q9UNY4 1162 aaKnown RBP18.68■□□□□ 0.58
RPS28-201ENST00000417088 UNCXA6NJT0 531 aa18.67■□□□□ 0.58
RPS28-201ENST00000417088 FKTNO75072 461 aa18.67■□□□□ 0.58
RPS28-201ENST00000417088 USP2O75604 605 aaPredicted RBP18.67■□□□□ 0.58
RPS28-201ENST00000417088 ZBTB48P10074 688 aaPredicted RBP18.67■□□□□ 0.58
RPS28-201ENST00000417088 INHBEP58166 350 aa18.67■□□□□ 0.58
RPS28-201ENST00000417088 SPDYE2Q495Y8 402 aa18.67■□□□□ 0.58
RPS28-201ENST00000417088 LRRC24Q50LG9 513 aa18.67■□□□□ 0.58
RPS28-201ENST00000417088 FBXO33Q7Z6M2 555 aa18.67■□□□□ 0.58
RPS28-201ENST00000417088 TDRD3Q9H7E2 651 aaKnown RBP18.67■□□□□ 0.58
RPS28-201ENST00000417088 ALDH1A1P00352 501 aa18.66■□□□□ 0.58
RPS28-201ENST00000417088 IFNL1Q8IU54 200 aa18.66■□□□□ 0.58
RPS28-201ENST00000417088 PTPRCP08575 1304 aa18.66■□□□□ 0.58
RPS28-201ENST00000417088 PDE4DIPQ5VU43 2346 aa18.66■□□□□ 0.58
RPS28-201ENST00000417088 IGF2BP3O00425 579 aaKnown RBP eCLIP18.65■□□□□ 0.58
RPS28-201ENST00000417088 IREB2P48200 963 aaKnown RBP18.65■□□□□ 0.58
RPS28-201ENST00000417088 TNFAIP1Q13829 316 aa18.65■□□□□ 0.58
RPS28-201ENST00000417088 GRIK5Q16478 980 aa18.65■□□□□ 0.58
RPS28-201ENST00000417088 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
RPS28-201ENST00000417088 VGLL2Q8N8G2 317 aa18.65■□□□□ 0.58
RPS28-201ENST00000417088 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
RPS28-201ENST00000417088 IQSEC3Q9UPP2 1182 aaPredicted RBP18.65■□□□□ 0.58
RPS28-201ENST00000417088 TNRC18O15417 2968 aaPredicted RBP18.65■□□□□ 0.58
RPS28-201ENST00000417088 E9PSI1 815 aa18.64■□□□□ 0.57
RPS28-201ENST00000417088 PDE8BO95263 885 aa18.64■□□□□ 0.57
RPS28-201ENST00000417088 GJA5P36382 358 aa18.64■□□□□ 0.57
RPS28-201ENST00000417088 CRKP46108 304 aa18.64■□□□□ 0.57
RPS28-201ENST00000417088 METTL24Q5JXM2 366 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms